BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0137000 Os02g0137000|AK111719
(754 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G33530.3 | chr3:14085354-14093449 FORWARD LENGTH=1377 914 0.0
AT2G26610.1 | chr2:11318771-11324174 FORWARD LENGTH=1250 887 0.0
>AT3G33530.3 | chr3:14085354-14093449 FORWARD LENGTH=1377
Length = 1376
Score = 914 bits (2361), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/778 (61%), Positives = 574/778 (73%), Gaps = 66/778 (8%)
Query: 33 TVKINLMGQLHLLSSTVTTLAVPSPSLLATVARGGNNPAPAVPLVAVGTQNGTIEIVDVL 92
+++I+L GQL LLSSTV+TLAVPSPSL AT+ARGGN PA AVPLVA+GTQ+GTI++VDV
Sbjct: 489 SMQISLTGQLQLLSSTVSTLAVPSPSLTATLARGGNIPAAAVPLVALGTQSGTIDVVDVS 548
Query: 93 ANAISVSFAVHSSTVRGLRWLGNSRLVSFSYSQANDKTGGYNNKLIITCLRSGLNRSFRV 152
NA++ S +VH+ VRGLRWLGNSRLVSFSYSQ NDK+ GY N+L++TCLRSGLN+ FR
Sbjct: 549 TNAVAASTSVHTGVVRGLRWLGNSRLVSFSYSQVNDKSRGYINRLVVTCLRSGLNKPFRD 608
Query: 153 LQKPERAPIRALRASSSGR---------------YLLILFRDAPVEVWAMTKNPMMLRSL 197
LQKPER PIRALR SSSGR YLLILFRDAPVEVWAMTK+P+MLRSL
Sbjct: 609 LQKPERTPIRALRTSSSGRSSRILLHYFKDEELLYLLILFRDAPVEVWAMTKHPVMLRSL 668
Query: 198 ALPFTVLEWTLPSAPRPGQNAASKQSSTSKE------RSAEATGAESTDETSESFAFALV 251
ALPFTV+EWTLP+ PRPGQ SKQS ++ E S+ S +ET ESFAFALV
Sbjct: 669 ALPFTVVEWTLPAVPRPGQGGPSKQSLSASEGVTASGDSSSVGSDGSQEETVESFAFALV 728
Query: 252 NGALGVFEVHGRRIRDFRPKWPSSSFASADGLVTAMAYRLPHVVMGDRSGNIRWWDVTTG 311
NGALGVFEV GRRIRDFRPKWPS+SF +DGLVTAMAYRLPHVVMGDRSGNIRWWDVTTG
Sbjct: 729 NGALGVFEVQGRRIRDFRPKWPSTSFVPSDGLVTAMAYRLPHVVMGDRSGNIRWWDVTTG 788
Query: 312 LSSSFSTHREGIRRIKFSPVVHGDRSRGRIAVLFYDNTFSIFDL---------------- 355
SS+F++HR+GIRRIKFSPVV GDRSRGR+AVLF DNTFS+FDL
Sbjct: 789 QSSAFNSHRDGIRRIKFSPVVAGDRSRGRVAVLFNDNTFSVFDLVSLKRIQYFPSICAHV 848
Query: 356 ----------DSADPLANALLQPQSPGTLVLELDWLSTRTKKDEPLVLCIAGADSSFRLI 405
DS DPLA +LLQPQ PGTLVLELDWL RT K++PLVLCIAGADS+FRL+
Sbjct: 849 LWFQRWCTNIDSPDPLAQSLLQPQIPGTLVLELDWLPLRTDKNDPLVLCIAGADSTFRLV 908
Query: 406 EVNIDPRASSTL-RPVTTRERFRPMPLCLPILFPTAHALALRMILQLGVKPSWFECNSGD 464
EV ++ + + + + + +ERFRPMP+ PIL P HALALRMILQLGVKPSWF
Sbjct: 909 EVTVNEKKAGFVPQSKSVKERFRPMPMYSPILLPVPHALALRMILQLGVKPSWFNT---- 964
Query: 465 KLASSSFKEAP-------ATFGDLRSYMIETTLPPIGDSVVAELLLKVLEPYRKDGFILD 517
+S++ ++ P ++ DLRSYMI+ LPP+GD VV E+LLK+LEPYRK+G +LD
Sbjct: 965 --SSTTLEKRPHLIRGMASSSKDLRSYMIQ--LPPLGDPVVPEMLLKILEPYRKEGCLLD 1020
Query: 518 DGRAKLYSAIVNKGTCARFAFAAAIFGDIQEALFWLQLPQALHHYLDXXXXXXXXXXXXX 577
D RAKLY+ +V KG ARFAFAA++FG+ EALFWLQLPQA+ H ++
Sbjct: 1021 DERAKLYADVVKKGYAARFAFAASVFGETSEALFWLQLPQAIRHLMNKLTRRSPQKISSP 1080
Query: 578 XVHYHSEQASTLNRASSSTERSAPENMAKVAENC-GQLSSMAFRQEQLWFNANERIPWHE 636
+ +++ + ++ ST S+PE K+ C G L MAF +E+L ANER+PWHE
Sbjct: 1081 TLDSGADEVAMPSKI-PSTGLSSPE-ARKIDSMCDGSLRLMAFEREELRTRANERLPWHE 1138
Query: 637 KLDGEEALQKRVHELVSLGNLETAVSLLLSTPPEGSNFYPNXXXXXXXXXXXXXXXHELA 696
KLDGE+ +QK+VHEL+S+GNLE AVSLLLS+ P+ FYPN +LA
Sbjct: 1139 KLDGEDCIQKQVHELISVGNLEAAVSLLLSSAPDSPYFYPNALRAVALASAVSKSLLDLA 1198
Query: 697 VKVVAANMVRTDKSLSGTHLLCAVGRYQEACSQLQDAGCWVDAATLAASHLHGSDYAR 754
+KVVAANMVRTD SL+GTHLLCAVGR+QEACSQLQD+G W DAATLAA+HL GSDYAR
Sbjct: 1199 LKVVAANMVRTDNSLTGTHLLCAVGRHQEACSQLQDSGRWTDAATLAATHLEGSDYAR 1256
>AT2G26610.1 | chr2:11318771-11324174 FORWARD LENGTH=1250
Length = 1249
Score = 887 bits (2293), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/743 (62%), Positives = 555/743 (74%), Gaps = 42/743 (5%)
Query: 31 DFTVKINLMGQLHLLSSTVTTLAVPSPSLLATVARGGNNPAPAVPLVAVGTQNGTIEIVD 90
+ + +I L+GQL LLSS VT LA+P+PS+ AT+ARGGN PA VPLVA+GT+ GTI++VD
Sbjct: 435 NISFEITLVGQLQLLSSAVTVLAIPTPSMTATLARGGNFPAVVVPLVALGTEAGTIDVVD 494
Query: 91 VLANAISVSFAVHSSTVRGLRWLGNSRLVSFSYSQANDKTGGYNNKLIITCLRSGLNRSF 150
V ANA++ SF+ H+S++RGL WLGNSRLVS+S S+ + +TGGY NKL++TCLRSG++R F
Sbjct: 495 VSANAVAASFSAHTSSIRGLNWLGNSRLVSYSCSRVSKRTGGYVNKLVVTCLRSGVSRGF 554
Query: 151 RVLQKPERAPIRALRASSSGRYLLILFRDAPVEVWAMTKNPMMLRSLALPFTVLEWTLPS 210
RVLQKPERAPIRALRASSSGRYLLILFRDAPVEVWAMTK+P+MLRSLALPFTVLEWTLP+
Sbjct: 555 RVLQKPERAPIRALRASSSGRYLLILFRDAPVEVWAMTKSPVMLRSLALPFTVLEWTLPT 614
Query: 211 APRPGQNAASKQSSTSKERSAEATGAES----------------TDETSESFAFALVNGA 254
P Q + SKQ S S + T ++ D+ SESFAFALVNG+
Sbjct: 615 IPSIAQKSLSKQLSMSSNQEVNVTPSDIETPNASDSKAVAADALQDDASESFAFALVNGS 674
Query: 255 LGVFEVHGRRIRDFRPKWPSSSFASADGLVTAMAYRLPHVVMGDRSGNIRWWDVTTGLSS 314
LGVFEV+GRRIRDFRPKWP+SSF S DGL+TAMAYRLPHVV GD+ GNIRWWDV +G SS
Sbjct: 675 LGVFEVYGRRIRDFRPKWPASSFISTDGLITAMAYRLPHVVTGDKLGNIRWWDVVSGNSS 734
Query: 315 SFSTHREGIRRIKFSPVVHGDRSRGRIAVLFYDNTFSIFDLDSADPLANALLQPQSPGTL 374
SF+T +EGI++IKFSPV GD SRGRI VLFYDNTFSI+DLDS DPLA +L++PQ PGTL
Sbjct: 735 SFNTCKEGIKKIKFSPVFSGDISRGRITVLFYDNTFSIYDLDSPDPLAISLMRPQIPGTL 794
Query: 375 VLELDWLSTRTKKDEPLVLCIAGADSSFRLIEVNIDPRASSTLRPVTTRERFRPMPLCLP 434
+LELDWL RT K + LVLC+AG D SFRL+EV++D + ++ + P +ERFR +PLC P
Sbjct: 795 ILELDWLPLRTSKFDSLVLCVAGTDGSFRLVEVHLDEKMTTQIPP---KERFRSVPLCTP 851
Query: 435 ILFPTAHALALRMILQLGVKPSWFECNSG--DKLASSSFKEAPATFGDLRSYMIETTLPP 492
+L PT HAL LGVKPSWF +S DK S ++ DLRS+MI+ PP
Sbjct: 852 MLLPTPHAL-------LGVKPSWFNTSSTCIDK-RPHSIPGRTSSSKDLRSFMID--FPP 901
Query: 493 IGDSVVAELLLKVLEPYRKDGFILDDGRAKLYSAIVNKGTCARFAFAAAIFGDIQEALFW 552
IGD V E+ LKVLEPYR +G +LDD +AKLYS++VNKG ARFAFAAAIFG+ EALFW
Sbjct: 902 IGDPAVLEMFLKVLEPYRSEGCLLDDEKAKLYSSLVNKGCAARFAFAAAIFGETSEALFW 961
Query: 553 LQLPQALHHYLDXXXXXXXXXXXXXXVHYHSEQASTLNRASSSTERSAP-ENMAKVAENC 611
LQLP A+ H ++ E+ +TL++ SS S E ++E
Sbjct: 962 LQLPSAMKHVVNKTASKSAKK--------QFEETATLSKTSSKGPSSTGFEKNGSMSE-- 1011
Query: 612 GQLSSMAFRQEQLWFNANERIPWHEKLDGEEALQKRVHELVSLGNLETAVSLLLSTPPEG 671
GQL MAF Q+ LW ANERIPWHEKL+GEEA+Q RVHELVS+GNLE AVSLLLST P+
Sbjct: 1012 GQLRLMAFEQKDLWVCANERIPWHEKLEGEEAIQNRVHELVSVGNLEGAVSLLLSTSPDS 1071
Query: 672 SNFYPNXXXXXXXXXXXXXXXHELAVKVVAANMVRTDKSLSGTHLLCAVGRYQEACSQLQ 731
S FYPN ELAVKVVAANMVR+D+SLSGTHLLC+VGRYQEACSQLQ
Sbjct: 1072 SYFYPNALRAVALSSTVSKSLVELAVKVVAANMVRSDRSLSGTHLLCSVGRYQEACSQLQ 1131
Query: 732 DAGCWVDAATLAASHLHGSDYAR 754
DAGCW D+ATLAA+HL+GSDYAR
Sbjct: 1132 DAGCWTDSATLAATHLNGSDYAR 1154
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.132 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 15,096,842
Number of extensions: 602880
Number of successful extensions: 1601
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1587
Number of HSP's successfully gapped: 2
Length of query: 754
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 648
Effective length of database: 8,200,473
Effective search space: 5313906504
Effective search space used: 5313906504
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 116 (49.3 bits)