Os02g0133800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Proteasome subunit alpha type 1 (EC 3.4.25.1) (20S proteasome alpha subunit F) (20S proteasome subunit alpha-6) (Proteasome component C2).
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Os02g0133800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Proteasome subunit alpha type 1 (EC 3.4.25.1) (20S proteasome alpha subunit F) (20S proteasome subunit alpha-6) (Proteasome component C2).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 14.15 | 0.177 | 13.2 | 0.969 | 0.358 | 0.703 | -0.112 | -0.171 | 0.233 | 17.7 | 24.76 | 338 | -- | -- |
| 14.19 | 0.175 | 13.2 | 0.95 | 0.345 | 0.719 | -0.0598 | -- | 0.228 | 17.6 | 24.6 | 338 | -- | -- |
| 14.17 | 0.175 | 13.2 | 0.965 | 0.357 | 0.702 | -- | -0.136 | 0.231 | 17.6 | 24.75 | 336 | -- | -- |
| 14.19 | 0.175 | 13.2 | 0.945 | 0.352 | 0.723 | -- | -- | 0.223 | 17.6 | 24.6 | 337 | -- | -- |
| 18.15 | 0.198 | 13.2 | 1.02 | -- | 0.68 | -- | -0.301 | 0.251 | -- | 25.6 | 1364 | -- | -- |
| 21.56 | 0.218 | 13.3 | 0.758 | 0.276 | -- | -0.0689 | -- | 0.0879 | 17.9 | -- | -- | -- | -- |
| 21.57 | 0.217 | 13.3 | 0.759 | 0.275 | -- | -- | -- | 0.0877 | 17.8 | -- | -- | -- | -- |
| 18.3 | 0.199 | 13.2 | 0.918 | -- | 0.681 | -- | -- | 0.228 | -- | 25.3 | 1351 | -- | -- |
| 35.16 | 0.276 | 13.3 | -- | 0.268 | 0.341 | -- | -- | 0.0574 | 17.7 | 24.44 | 293 | -- | -- |
| 25.5 | 0.236 | 13.3 | 0.751 | -- | -- | -- | -- | 0.0813 | -- | -- | -- | -- | -- |
| 36.76 | 0.284 | 13.3 | -- | 0.264 | -- | -- | -- | 0.00316 | 18 | -- | -- | -- | -- |
| 39.24 | 0.293 | 13.3 | -- | -- | 0.256 | -- | -- | 0.032 | -- | 24 | 292 | -- | -- |
| 40.37 | 0.297 | 13.3 | -- | -- | -- | -- | -- | -0.00203 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 13.87 | temperature | 15 | 270 | > th | dose dependent | rect. | 8 | 21 |
| 4 | 14.03 | temperature | 25 | 270 | < th | dose dependent | rect. | 3 | 22 |
| 7 | 14.09 | temperature | 25 | 270 | < th | dose dependent | rect. | 11 | 23 |
| 22 | 14.23 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 19 |
| 36 | 14.31 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 71 | 14.46 | temperature | 25 | 270 | < th | dose dependent | rect. | 19 | 23 |
| 84 | 14.52 | temperature | 20 | 270 | > th | dose independent | rect. | 9 | 20 |
| 97 | 14.57 | temperature | 20 | 270 | > th | dose independent | rect. | 10 | 18 |
| 131 | 14.69 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 19 |
| 156 | 14.74 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 13 |
| 186 | 14.78 | temperature | 25 | 1440 | < th | dose dependent | sin | 16 | NA |
| 245 | 14.84 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 260 | 14.84 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 23 |
| 262 | 14.84 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 277 | 14.85 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 280 | 14.85 | temperature | 25 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 484 | 14.99 | temperature | 10 | 270 | > th | dose dependent | rect. | 20 | 23 |
| 487 | 15.00 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 4 |
| 517 | 15.02 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 533 | 15.03 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 568 | 15.05 | temperature | 10 | 1440 | > th | dose dependent | rect. | 22 | 2 |
| 588 | 15.06 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 9 |
| 633 | 15.08 | temperature | 15 | 720 | > th | dose dependent | sin | 13 | NA |
| 638 | 15.08 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 6 |
| 671 | 15.09 | temperature | 25 | 1440 | < th | dose dependent | sin | 4 | NA |