BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0133800 Os02g0133800|AK109376
(270 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G42790.1 | chr5:17159270-17160975 REVERSE LENGTH=279 385 e-107
AT1G47250.1 | chr1:17319220-17320900 FORWARD LENGTH=278 384 e-107
AT3G14290.1 | chr3:4764364-4766381 FORWARD LENGTH=238 154 6e-38
AT1G53850.1 | chr1:20104131-20105792 REVERSE LENGTH=238 152 2e-37
AT3G22110.1 | chr3:7792819-7793571 REVERSE LENGTH=251 142 2e-34
AT1G16470.1 | chr1:5623122-5625439 FORWARD LENGTH=236 136 1e-32
AT1G79210.1 | chr1:29796286-29798240 REVERSE LENGTH=236 135 3e-32
AT5G35590.1 | chr5:13765417-13767768 REVERSE LENGTH=247 133 1e-31
AT2G05840.1 | chr2:2234226-2236053 FORWARD LENGTH=247 131 4e-31
AT2G27020.1 | chr2:11528515-11530858 REVERSE LENGTH=250 128 4e-30
AT5G66140.1 | chr5:26437445-26438677 REVERSE LENGTH=251 128 4e-30
AT3G51260.1 | chr3:19031086-19032746 FORWARD LENGTH=251 124 5e-29
AT4G15165.1 | chr4:8649460-8650212 FORWARD LENGTH=209 98 4e-21
>AT5G42790.1 | chr5:17159270-17160975 REVERSE LENGTH=279
Length = 278
Score = 385 bits (990), Expect = e-107, Method: Compositional matrix adjust.
Identities = 182/238 (76%), Positives = 204/238 (85%), Gaps = 5/238 (2%)
Query: 1 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSACVGLRSRTHAVLAAANKAASELSSHQ 60
MFRNQYDTDVTTWSP GRLFQVEYAMEAVKQGSA +GLRSR+H VLA NKA SELSSHQ
Sbjct: 1 MFRNQYDTDVTTWSPTGRLFQVEYAMEAVKQGSAAIGLRSRSHVVLACVNKAQSELSSHQ 60
Query: 61 RKVFRVADHAGVALAGLTADGRVLSRFLRSECINHAFVYDAPLPVSRLALRLADKAQVCT 120
RK+F+V DH GVA+AGLTADGRVLSR++RSE INH+F Y++PLPV RL + LADKAQVCT
Sbjct: 61 RKIFKVDDHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQVCT 120
Query: 121 QRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTFLERRFEGYN 180
QRSWKRPYGVGLLV GLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKT+LERRFE +
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFESFG 180
Query: 181 DYTPEQLIKDALSAIKETLQGEKLTSSNCTVAIVGRKDDGTVEPFEMIDVKRIQEIID 238
D + E LIKDA+ A++ETLQGE L SS CTVAI+ G EPF +D + IQ++ID
Sbjct: 181 DSSREDLIKDAILAVRETLQGETLKSSLCTVAIL-----GVDEPFHFLDQEAIQKVID 233
>AT1G47250.1 | chr1:17319220-17320900 FORWARD LENGTH=278
Length = 277
Score = 384 bits (987), Expect = e-107, Method: Compositional matrix adjust.
Identities = 179/238 (75%), Positives = 204/238 (85%), Gaps = 5/238 (2%)
Query: 1 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSACVGLRSRTHAVLAAANKAASELSSHQ 60
MFRNQYDTDVTTWSP GRLFQVEYAMEAVKQGSA +GLRSR+H VLA NKA SELSSHQ
Sbjct: 1 MFRNQYDTDVTTWSPTGRLFQVEYAMEAVKQGSAAIGLRSRSHVVLACVNKAQSELSSHQ 60
Query: 61 RKVFRVADHAGVALAGLTADGRVLSRFLRSECINHAFVYDAPLPVSRLALRLADKAQVCT 120
RK+F+V DH GVA+AGLTADGRVLSR++RSE INH+F Y++PLPV RL + LADKAQVCT
Sbjct: 61 RKIFKVDDHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQVCT 120
Query: 121 QRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTFLERRFEGYN 180
QRSWKRPYGVGLLV GLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKT+LER+FE +
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERKFESFQ 180
Query: 181 DYTPEQLIKDALSAIKETLQGEKLTSSNCTVAIVGRKDDGTVEPFEMIDVKRIQEIID 238
+ + E LIKDA+ AI+ETLQGE L SS CTV+++ G EPF +D + IQ++ID
Sbjct: 181 ESSKEDLIKDAIMAIRETLQGETLKSSLCTVSVL-----GVDEPFHFLDQESIQKVID 233
>AT3G14290.1 | chr3:4764364-4766381 FORWARD LENGTH=238
Length = 237
Score = 154 bits (388), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 89/223 (39%), Positives = 127/223 (56%), Gaps = 16/223 (7%)
Query: 1 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSACVGLRSRTHAVLAAANKAASEL--SS 58
+ R +YD V T+SP GRLFQVEYA+EA+K GS +G++++ VLA + S L S
Sbjct: 3 LTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPS 62
Query: 59 HQRKVFRVADHAGVALAGLTADGRVLSRFLRSECINHAFVYDAPLPVSR-------LALR 111
K+ + DH G A++GL AD R L R E NH F Y P+ V LALR
Sbjct: 63 SVEKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALR 122
Query: 112 LADKAQVCTQRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTF 171
+ + S RP+GV LL+AG DE+G LYY PSG +++ A AIGS S+ A +
Sbjct: 123 FGEGE----EESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSS 178
Query: 172 LERRFEGYNDYTPEQLIKDALSAIKETLQGEKLTSSNCTVAIV 214
L+ +F D T ++ A+S +K+ ++ EK+T +N +A V
Sbjct: 179 LQEQFN--KDITLQEAETIAVSILKQVME-EKVTPNNVDIAKV 218
>AT1G53850.1 | chr1:20104131-20105792 REVERSE LENGTH=238
Length = 237
Score = 152 bits (384), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/223 (39%), Positives = 127/223 (56%), Gaps = 16/223 (7%)
Query: 1 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSACVGLRSRTHAVLAAANKAASEL--SS 58
+ R +YD V T+SP GRLFQVEYA+EA+K GS +G++++ VLA + S L S
Sbjct: 3 LTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPS 62
Query: 59 HQRKVFRVADHAGVALAGLTADGRVLSRFLRSECINHAFVYDAPLPVSR-------LALR 111
K+ + DH G A++GL AD R L R E NH F Y P+ V LALR
Sbjct: 63 SVEKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALR 122
Query: 112 LADKAQVCTQRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTF 171
+ + S RP+GV LL+AG DE+G LYY PSG +++ A AIGS S+ A +
Sbjct: 123 FGEGE----EESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSS 178
Query: 172 LERRFEGYNDYTPEQLIKDALSAIKETLQGEKLTSSNCTVAIV 214
L+ +F D + ++ A+S +K+ ++ EK+T +N +A V
Sbjct: 179 LQEQFN--KDLSLQEAETIAVSILKQVME-EKVTPNNVDIAKV 218
>AT3G22110.1 | chr3:7792819-7793571 REVERSE LENGTH=251
Length = 250
Score = 142 bits (357), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 127/223 (56%), Gaps = 6/223 (2%)
Query: 5 QYDTDVTTWSPAGRLFQVEYAMEAVKQGSACVGLRSRTHAVLAAANKAASEL---SSHQR 61
+YD+ T +SP GRL+QVEYAMEA+ + +G+ S+ VL K S+L S+
Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLIGEKKVTSKLLQTSTSAE 63
Query: 62 KVFRVADHAGVALAGLTADGRVLSRFLRSECINHAFVYDAPLPVSRLALRLADKAQVCTQ 121
K++++ DH A+AG+ +D +L R + + F+Y P+PV +L L D Q TQ
Sbjct: 64 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFMYQEPMPVEQLVQSLCDTKQGYTQ 123
Query: 122 RSWKRPYGVGLLVAGLDE-SGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTFLERRFEGYN 180
RP+GV L AG D+ G LY + PSGNY ++A A+G+ +QAA++ L++ ++ +
Sbjct: 124 FGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYGGWKAAAVGANNQAAQSILKQDYK--D 181
Query: 181 DYTPEQLIKDALSAIKETLQGEKLTSSNCTVAIVGRKDDGTVE 223
D T E+ ++ AL + +T+ LTS +A V TV+
Sbjct: 182 DATREEAVELALKVLTKTMDSTSLTSEKLELAEVYLTPSKTVK 224
>AT1G16470.1 | chr1:5623122-5625439 FORWARD LENGTH=236
Length = 235
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 120/217 (55%), Gaps = 5/217 (2%)
Query: 1 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSACVGLRSRTHAVLAAANKAASEL--SS 58
M +QY +TT+SP+G+L Q+E+A+ AV G +G+++ V+A K S L +
Sbjct: 1 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEA 60
Query: 59 HQRKVFRVADHAGVALAGLTADGRVLSRFLRSECINHAFVYDAPLPVSRLALRLADKAQV 118
+K+ + + GV +G+ D RVL R R + + +Y P+PV++L A Q
Sbjct: 61 SVQKIQHLTPNIGVVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQE 120
Query: 119 CTQRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTFLERRFEG 178
TQ RP+GV LLVAG D+ G LY PSG+YF ++A A+G AKTFLE+R+
Sbjct: 121 FTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYT- 179
Query: 179 YNDYTPEQLIKDALSAIKETLQGEKLTSSNCTVAIVG 215
D + I A+ +KE +GE ++S N + +G
Sbjct: 180 -EDMELDDAIHTAILTLKEGFEGE-ISSKNIEIGKIG 214
>AT1G79210.1 | chr1:29796286-29798240 REVERSE LENGTH=236
Length = 235
Score = 135 bits (339), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 119/217 (54%), Gaps = 5/217 (2%)
Query: 1 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSACVGLRSRTHAVLAAANKAASEL--SS 58
M +QY +TT+SP+G+L Q+E+A+ AV G +G+++ V+A K S L +
Sbjct: 1 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEA 60
Query: 59 HQRKVFRVADHAGVALAGLTADGRVLSRFLRSECINHAFVYDAPLPVSRLALRLADKAQV 118
+K+ + + G +G+ D RVL R R + + +Y P+PV++L A Q
Sbjct: 61 SVQKIQHLTPNIGTVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQE 120
Query: 119 CTQRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTFLERRFEG 178
TQ RP+GV LLVAG D+ G LY PSG+YF ++A A+G AKTFLE+R+
Sbjct: 121 FTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYT- 179
Query: 179 YNDYTPEQLIKDALSAIKETLQGEKLTSSNCTVAIVG 215
D + I A+ +KE +GE ++S N + +G
Sbjct: 180 -EDMELDDAIHTAILTLKEGFEGE-ISSKNIEIGKIG 214
>AT5G35590.1 | chr5:13765417-13767768 REVERSE LENGTH=247
Length = 246
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 119/213 (55%), Gaps = 5/213 (2%)
Query: 6 YDTDVTTWSPAGRLFQVEYAMEAVKQ-GSACVGLRSRTHAVLAAANKAASEL--SSHQRK 62
YD +T +SP GRLFQVEYA +AVK G +G+R + + K +L S
Sbjct: 9 YDRHITIFSPEGRLFQVEYAFKAVKTAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVTH 68
Query: 63 VFRVADHAGVALAGLTADGRVLSRFLRSECINHAFVYDAPLPVSRLALRLADKAQVCTQR 122
+F + + G+ G+TAD R L + R++ F Y +PV LA +ADK+QV TQ
Sbjct: 69 LFPITKYIGLVATGITADARSLVQQARNQAAEFRFTYGYEMPVDILAKWIADKSQVYTQH 128
Query: 123 SWKRPYGVGLLVAGLDESGAHLYYNC-PSGNYFEYQAFAIGSRSQAAKTFLERRFEGYND 181
++ RP GV +V G+DE L Y C P+G+++ ++A + G + Q A FLE++ +
Sbjct: 129 AYMRPLGVVAMVMGVDEENGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKENPS 188
Query: 182 YTPEQLIKDALSAIKETLQGEKLTSSNCTVAIV 214
+T ++ ++ A+SA++ LQ E ++ V +V
Sbjct: 189 FTFDETVQTAISALQSVLQ-EDFKATEIEVGVV 220
>AT2G05840.1 | chr2:2234226-2236053 FORWARD LENGTH=247
Length = 246
Score = 131 bits (329), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 121/218 (55%), Gaps = 6/218 (2%)
Query: 6 YDTDVTTWSPAGRLFQVEYAMEAVKQ-GSACVGLRSRTHAVLAAANKAASEL--SSHQRK 62
YD +T +SP GRLFQVEYA +AVK G +G+R + + K +L S
Sbjct: 9 YDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVSH 68
Query: 63 VFRVADHAGVALAGLTADGRVLSRFLRSECINHAFVYDAPLPVSRLALRLADKAQVCTQR 122
+F V + G+ G+TAD R L + R+E F Y +P LA +ADK+QV TQ
Sbjct: 69 LFPVTKYLGLLATGMTADSRSLVQQARNEAAEFRFQYGYEMPADILAKWIADKSQVYTQH 128
Query: 123 SWKRPYGVGLLVAGLDESGAHLYYNC-PSGNYFEYQAFAIGSRSQAAKTFLERRFEGYND 181
++ RP GV +V G+DE L Y C P+G+++ ++A + G + Q A FLE++ +
Sbjct: 129 AYMRPLGVVAMVLGIDEERGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKENPA 188
Query: 182 YTPEQLIKDALSAIKETLQGEKLTSSNCTVAIVGRKDD 219
+T ++ ++ A+SA++ LQ E ++ V +V R DD
Sbjct: 189 FTYDETVQTAISALQSVLQ-EDFKATEIEVGVV-RADD 224
>AT2G27020.1 | chr2:11528515-11530858 REVERSE LENGTH=250
Length = 249
Score = 128 bits (321), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 97/171 (56%), Gaps = 2/171 (1%)
Query: 6 YDTDVTTWSPAGRLFQVEYAMEAVKQGSACVGLRSRTHAVLAAANKAASE--LSSHQRKV 63
YD VTT+SP GR+FQ+EYA +AV VG++ + V+ AS+ L R++
Sbjct: 8 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVVGIKCKDGIVMGVEKLIASKMMLPGSNRRI 67
Query: 64 FRVADHAGVALAGLTADGRVLSRFLRSECINHAFVYDAPLPVSRLALRLADKAQVCTQRS 123
V HAG+A+AGL ADGR + +SE ++ VY +PV L+ R+A +CT
Sbjct: 68 HSVHRHAGMAVAGLAADGRQIVARAKSEARSYESVYGDAVPVKELSERVASYVHLCTLYW 127
Query: 124 WKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTFLER 174
W RP+G G+++ G D G LY PSG + Y AIG QAAKT +E+
Sbjct: 128 WLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGKQAAKTEIEK 178
>AT5G66140.1 | chr5:26437445-26438677 REVERSE LENGTH=251
Length = 250
Score = 128 bits (321), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 118/220 (53%), Gaps = 10/220 (4%)
Query: 5 QYDTDVTTWSPAGRLFQVEYAMEAVKQGSACVGLRSRTHAVLAAANKAASEL--SSHQRK 62
+YD +T +SP G LFQVEYA+EAV++G+A VG+R VLA K+ +L S RK
Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLAVEKKSTPKLQDSRSARK 62
Query: 63 VFRVADHAGVALAGLTADGRVLSRFLRSECINHAFVYDAPLPVSRLALRLADKAQVCTQR 122
+ + +H +A AGL AD RVL R EC +H + P+ V + +A Q TQ
Sbjct: 63 IVSLDNHIALACAGLKADARVLINKARIECQSHRLTLEDPVTVEYITRYIAGLQQKYTQS 122
Query: 123 SWKRPYGVGLLVAGLDESG--AHLYYNCPSGNYFEYQAFAIGSRSQAAKTFLERRFEGYN 180
RP+G+ L+ G D LY PSG + ++A A G S + + FLE+ Y
Sbjct: 123 GGVRPFGLSTLIVGFDPYSRLPSLYQTDPSGTFSAWKANATGRNSNSIREFLEK---NYK 179
Query: 181 DYTPEQLIKDALSAIKETLQGEKLTSSNCTVAIVGRKDDG 220
+ + ++ IK A+ A+ E ++ N VA++ R++ G
Sbjct: 180 ESSGQETIKLAIRALLEVVES---GGKNIEVAVMTREETG 216
>AT3G51260.1 | chr3:19031086-19032746 FORWARD LENGTH=251
Length = 250
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 120/226 (53%), Gaps = 11/226 (4%)
Query: 5 QYDTDVTTWSPAGRLFQVEYAMEAVKQGSACVGLRSRTHAVLAAANKAASEL--SSHQRK 62
+YD +T +SP G LFQVEYA+EAV++G+A VG+R VLA K+ +L S RK
Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLAVEKKSTPKLQDSRSARK 62
Query: 63 VFRVADHAGVALAGLTADGRVLSRFLRSECINHAFVYDAPLPVSRLALRLADKAQVCTQR 122
+ + +H +A AGL AD RVL R EC +H + P+ V + +A Q TQ
Sbjct: 63 IVSLDNHIALACAGLKADARVLINKARIECQSHRLTLEDPVTVEYITRYIAGLQQKYTQS 122
Query: 123 SWKRPYGVGLLVAGLDESG--AHLYYNCPSGNYFEYQAFAIGSRSQAAKTFLERRFEGYN 180
RP+G+ L+ G D LY PSG + ++A A G S + + FLE+ Y
Sbjct: 123 GGVRPFGLSTLIVGFDPYTRIPALYQTDPSGTFSAWKANATGRNSNSIREFLEK---NYK 179
Query: 181 DYTPEQLIKDALSAIKETLQGEKLTSSNCTVAIVGRKDDGTVEPFE 226
+ ++ +K A+ A+ E ++ N VA++ R ++G ++ E
Sbjct: 180 ESAGQETVKLAIRALLEVVES---GGKNIEVAVMTR-EEGVLKQLE 221
>AT4G15165.1 | chr4:8649460-8650212 FORWARD LENGTH=209
Length = 208
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 107/211 (50%), Gaps = 46/211 (21%)
Query: 5 QYDTDVTTWSPAGRLFQVEYAMEAVKQGSACVGLRSRTHAVLAAANKAASEL---SSHQR 61
+YD+ T +SP GRL+QVEYAMEA+ + +G+ ++ VL K S+L SS
Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILAKDGVVLVGEKKVTSKLLQTSSSME 63
Query: 62 KVFRVADHAGVALAGLTADGRVLSRFLRSECINHAFVYDAPLPVSRLALRLADKAQVCTQ 121
K++++ DH A+AG+ +D +L IN A+V Q
Sbjct: 64 KMYKIDDHVACAVAGIMSDANIL--------IN--------------------TARVQAQ 95
Query: 122 RSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTFLERRFEGYND 181
R W R +G LY + PSGNY +QA A+G+ +QAA++ L++ ++ +D
Sbjct: 96 R-WDRNHGF------------QLYMSDPSGNYGGWQAAAVGANNQAAQSILKQDYK--DD 140
Query: 182 YTPEQLIKDALSAIKETLQGEKLTSSNCTVA 212
T E++++ A+ + +T+ LT+ +A
Sbjct: 141 ATREEVVQLAIKVLSKTMDSTSLTAEKLELA 171
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.133 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,952,277
Number of extensions: 180703
Number of successful extensions: 505
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 488
Number of HSP's successfully gapped: 13
Length of query: 270
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 173
Effective length of database: 8,447,217
Effective search space: 1461368541
Effective search space used: 1461368541
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 111 (47.4 bits)