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Os02g0132300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Erythrocyte membrane protein PFEMP3 (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.57 (0.0157) R2 : 0.362
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.574 (0.0411) R2dC : 0.275 R2C : 0.257
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.252 (0.0331) R2dN8 : 0.105 R2N8 : 0.0865
σ : 0.296
deviance : 40.1
__
_____
C
peak time of C : 6.66
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
35.33 0.279 7.59 -0.0838 0.577 0.426 0.115 1.83 0.229 6.77 49.03 4676 -- --
37.5 0.285 7.59 -0.0389 0.602 0.318 0.2 -- 0.194 6.78 39.99 11415 -- --
35.35 0.277 7.59 -0.0846 0.576 0.428 -- 1.85 0.229 6.73 49.27 4647 -- --
37.33 0.285 7.59 -0.066 0.58 0.266 -- -- 0.185 6.75 40.41 11422 -- --
52.54 0.338 7.6 -0.0938 -- 0.427 -- 1.93 0.243 -- 49.47 4436 -- --
39.31 0.294 7.58 -0.172 0.576 -- 0.0971 -- 0.233 6.68 -- -- -- --
39.33 0.294 7.58 -0.171 0.576 -- -- -- 0.233 6.64 -- -- -- --
54.45 0.344 7.6 -0.0612 -- 0.286 -- -- 0.188 -- 39.97 11498 -- --
37.52 0.285 7.59 -- 0.575 0.272 -- -- 0.188 6.76 40.02 11416 -- --
56.65 0.352 7.59 -0.158 -- -- -- -- 0.245 -- -- -- -- --
40.1 0.296 7.57 -- 0.574 -- -- -- 0.252 6.66 -- -- -- --
54.62 0.344 7.6 -- -- 0.293 -- -- 0.19 -- 40 11498 -- --
57.31 0.353 7.59 -- -- -- -- -- 0.262 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 33.55 temperature 20.0 1440 < th dose independent rect. 21 1
2 33.65 temperature 20.0 1440 > th dose independent rect. 21 1
3 33.66 humidity 90.0 14400 < th dose independent rect. 6 1
4 33.75 radiation 40.0 4320 < th dose dependent rect. 18 11
8 34.04 humidity 90.0 14400 > th dose independent rect. 6 1
9 34.06 humidity 80.0 14400 > th dose dependent rect. 6 1
12 34.25 wind 3.0 43200 < th dose dependent rect. 4 1
23 34.44 humidity 80.0 14400 > th dose dependent rect. 23 1
24 34.44 humidity 90.0 4320 > th dose dependent rect. 6 7
27 34.51 humidity 50.0 14400 > th dose dependent rect. 23 1
40 34.60 wind 1.0 43200 < th dose independent rect. 2 2
41 34.60 humidity 50.0 14400 > th dose dependent rect. 20 8
43 34.61 humidity 80.0 14400 > th dose independent rect. 18 6
55 34.65 humidity 70.0 14400 > th dose dependent rect. 20 12
61 34.66 radiation 40.0 4320 < th dose dependent rect. 18 8
62 34.66 humidity 50.0 14400 > th dose dependent rect. 20 12
73 34.69 humidity 90.0 14400 < th dose dependent rect. 20 4
77 34.70 wind 1.0 4320 > th dose dependent rect. 17 2
78 34.70 temperature 20.0 1440 < th dose dependent rect. 24 3
80 34.71 wind 1.0 43200 < th dose dependent rect. 2 2
85 34.72 radiation 1.0 4320 < th dose independent rect. 7 1
87 34.72 wind 9.0 4320 < th dose dependent rect. 17 2
95 34.74 radiation 1.0 4320 > th dose independent rect. 7 1
100 34.75 wind 1.0 43200 > th dose independent rect. 2 2
112 34.76 wind 9.0 43200 > th dose dependent rect. 18 1
122 34.78 radiation 1.0 4320 < th dose dependent rect. 7 1
172 34.86 wind 9.0 43200 > th dose independent rect. 18 1
185 34.88 precipitation 0.1 43200 > th dose dependent rect. 3 1
187 34.89 radiation 20.0 4320 > th dose independent rect. 6 2
205 34.90 wind 9.0 43200 < th dose independent rect. 18 1
223 34.92 temperature 30.0 720 < th dose dependent rect. 7 2
227 34.92 radiation 40.0 4320 > th dose dependent rect. 7 3
268 34.95 humidity 80.0 14400 > th dose dependent rect. 3 5
314 35.01 humidity 80.0 14400 < th dose independent rect. 18 5
316 35.01 humidity 50.0 720 > th dose independent rect. 1 14
322 35.01 radiation 30.0 4320 < th dose dependent rect. 18 3
330 35.02 humidity 80.0 14400 > th dose dependent sin 9 NA
335 35.02 radiation 20.0 4320 > th dose dependent rect. 6 2
384 35.06 precipitation 0.1 43200 > th dose independent rect. 3 1
388 35.06 humidity 90.0 4320 > th dose dependent rect. 6 13
392 35.07 wind 1.0 43200 < th dose independent rect. 2 4
411 35.08 wind 1.0 4320 > th dose dependent rect. 13 6
422 35.09 wind 9.0 4320 < th dose dependent rect. 13 6
432 35.10 radiation 40.0 1440 > th dose independent rect. 14 19
441 35.11 precipitation 0.1 43200 < th dose independent rect. 3 1
442 35.11 precipitation 0.1 43200 < th dose dependent rect. 3 1
511 35.16 radiation 40.0 4320 < th dose independent rect. 24 9
531 35.18 radiation 40.0 4320 < th dose independent rect. 19 14
533 35.18 radiation 1.0 4320 > th dose independent rect. 18 18
557 35.20 radiation 1.0 4320 > th dose independent rect. 18 15
588 35.21 radiation 1.0 14400 > th dose dependent rect. 18 12
593 35.22 radiation 40.0 4320 < th dose independent rect. 14 19
595 35.22 humidity 70.0 14400 > th dose dependent rect. 20 1
602 35.23 radiation 10.0 43200 > th dose independent rect. 5 1
653 35.24 radiation 40.0 4320 < th dose independent rect. 3 6
673 35.25 radiation 10.0 14400 > th dose independent rect. 12 1
681 35.25 precipitation 0.1 4320 < th dose independent rect. 1 8
695 35.25 precipitation 0.1 4320 < th dose dependent rect. 1 8
702 35.26 humidity 70.0 14400 < th dose independent rect. 14 1
719 35.27 humidity 70.0 43200 > th dose independent rect. 15 1
731 35.27 precipitation 0.1 4320 > th dose dependent rect. 1 8
739 35.28 radiation 40.0 4320 > th dose dependent sin 11 NA
759 35.29 humidity 70.0 43200 > th dose independent rect. 19 1
760 35.29 radiation 40.0 4320 < th dose independent rect. 7 2
775 35.30 temperature 20.0 720 < th dose independent rect. 6 1
778 35.30 radiation 10.0 14400 < th dose independent rect. 17 14
794 35.31 humidity 80.0 14400 > th dose independent sin 14 NA
797 35.31 humidity 70.0 43200 < th dose independent rect. 17 18
806 35.32 humidity 70.0 43200 < th dose independent sin 12 NA
807 35.32 radiation 1.0 4320 > th dose independent rect. 4 8
808 35.32 precipitation 0.1 4320 > th dose independent rect. 1 8
839 35.32 humidity 70.0 43200 < th dose dependent rect. 14 10
851 35.33 humidity 70.0 43200 < th dose independent rect. 19 1
853 35.33 humidity 80.0 43200 < th dose independent rect. 9 2
862 35.33 humidity 50.0 14400 > th dose dependent rect. 20 1
899 35.34 radiation 10.0 14400 < th dose independent rect. 24 7
903 35.34 radiation 1.0 4320 < th dose independent rect. 3 9
905 35.34 precipitation 0.1 4320 < th dose independent rect. 22 10
907 35.34 radiation 1.0 4320 < th dose independent rect. 1 11
910 35.34 radiation 10.0 14400 < th dose independent rect. 19 12
917 35.34 radiation 1.0 4320 < th dose independent rect. 19 17
918 35.34 humidity 70.0 43200 < th dose dependent sin 15 NA
920 35.34 wind 7.0 43200 > th dose dependent rect. 16 1
928 35.34 precipitation 0.1 43200 > th dose dependent rect. 13 4
930 35.34 radiation 40.0 14400 < th dose dependent rect. 24 6
931 35.34 humidity 70.0 43200 < th dose dependent rect. 14 7
936 35.34 atmosphere 1010.0 270 < th dose dependent rect. 21 10
937 35.34 precipitation 0.1 4320 < th dose dependent rect. 22 10
947 35.35 radiation 10.0 14400 < th dose independent rect. 3 4
983 35.36 wind 5.0 4320 > th dose independent rect. 16 3
993 35.36 humidity 90.0 4320 < th dose independent rect. 6 10