BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0132300 Os02g0132300|AK106973
         (272 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G50440.1  | chr1:18686099-18687646 FORWARD LENGTH=251          341   2e-94
AT1G11020.1  | chr1:3676968-3678350 FORWARD LENGTH=322            162   1e-40
AT2G22120.2  | chr2:9394026-9396979 FORWARD LENGTH=364            134   7e-32

>AT1G50440.1 | chr1:18686099-18687646 FORWARD LENGTH=251
          Length = 250

 Score =  341 bits (875), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 168/242 (69%), Positives = 195/242 (80%), Gaps = 8/242 (3%)

Query: 35  SQQIVSESSTAGSSTEHLVSCEIKPLGVDE----DIETIDANEETHLVIQDCPQCRICLD 90
            +QI+ + ST   S+  +V+ E     V+E    +I   D +E T LV  D PQCRICLD
Sbjct: 13  KEQILFDEST---SSNEIVAAERGDRVVEEGQVSEIAETDDDETTLLVSGDQPQCRICLD 69

Query: 91  NEGDDLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFSHCTECRAAFLLRANVPPDRWWLR 150
             G+DLIAPC+CKGTQK+VHRSCLDNWRSTKEGFAFSHCTECRA F LRANVP DRWWLR
Sbjct: 70  VGGEDLIAPCNCKGTQKHVHRSCLDNWRSTKEGFAFSHCTECRAFFKLRANVPADRWWLR 129

Query: 151 LKFQLLVVRDHTLIFFIVQLVVALLGMLVYRFYGDELREMFGYEEHPYAFYAMAILAIVL 210
           L+FQLLV RDH  IF  VQ++VA LG+LVY+FYG+ELREMFGYEEHPY FY +A+LAIVL
Sbjct: 130 LRFQLLVARDHAFIFISVQMIVAFLGLLVYKFYGEELREMFGYEEHPYGFYTLAVLAIVL 189

Query: 211 VGLLYGFFIAIICGQRITERHYHVLAKQELTKEYIVEDLEGTDGVPDLDPNHVTELRILG 270
           VGLLYGFFIAIICGQ+I ERHYHVLAKQELTKEYIVED +  + VP+LD +HV EL++LG
Sbjct: 190 VGLLYGFFIAIICGQKINERHYHVLAKQELTKEYIVEDRDCKN-VPELDQSHVMELKMLG 248

Query: 271 LY 272
           LY
Sbjct: 249 LY 250



>AT1G11020.1 | chr1:3676968-3678350 FORWARD LENGTH=322
          Length = 321

 Score =  162 bits (411), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/312 (35%), Positives = 142/312 (45%), Gaps = 71/312 (22%)

Query: 31  EVPASQQIVSESSTAGSSTEHLVSCEIKPLGVDEDIETIDANEETHLVIQDCPQCRICLD 90
           + P SQ++   +   G  T    +       V  + + I A E+        P CRICL+
Sbjct: 9   QPPDSQKLSDSAPLLGDHTNSSSASPSAASVVAGNSDEIKAEEDLENDASSAPCCRICLE 68

Query: 91  NE----GDDLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFSHCTECRAAFLLRANVPPDR 146
           ++    GD+LI+PC CKGTQ++VHRSCLD+WRS KEGFAFSHCT C+A F LR     D 
Sbjct: 69  DDSELLGDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRVEPFEDN 128

Query: 147 --WWLRLKFQLLVVRDHTLIFFIVQLVVALLGMLVYRFYGD-ELREMFG------YEEHP 197
             W  + KF+L V RD  L+F  VQ V+A++    Y    D E R  F         +HP
Sbjct: 129 NSWRRKAKFRLFVARDVLLVFLAVQTVIAVMAGFAYMMDKDGEFRNSFNDDWDRILSKHP 188

Query: 198 YAFYAM--AILAIVLVGLL-----------------------YG---------------- 216
             FY     I   VL G L                       YG                
Sbjct: 189 IPFYYCIGVISFFVLTGFLGIILHCSALNGNDPRMAGCQNCCYGWGVLDCFPASMEACFA 248

Query: 217 -----------------FFIAIICGQRITERHYHVLAKQELTKEYIVEDLEGTDGVPDLD 259
                            F  A +  QRI +RHYH+L K+ELTKEYIVEDL G+   P LD
Sbjct: 249 LVVVFVVIFAILGLAYGFLAATMAIQRIWQRHYHILTKRELTKEYIVEDLHGSYTPPKLD 308

Query: 260 PNHVTELRILGL 271
             H   L++L L
Sbjct: 309 AEHEGRLKMLKL 320



>AT2G22120.2 | chr2:9394026-9396979 FORWARD LENGTH=364
          Length = 363

 Score =  134 bits (336), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 64/123 (52%), Positives = 80/123 (65%), Gaps = 4/123 (3%)

Query: 84  QCRICLDNEGDDLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFSHCTECRAAFLLRANVP 143
           QCRICL+ +G D IAPC CKGT KYVHR CLD+WR+ KEGFAF+HCT C+A + LR +  
Sbjct: 34  QCRICLETDGRDFIAPCKCKGTSKYVHRDCLDHWRAIKEGFAFAHCTTCKAPYYLRVHSA 93

Query: 144 PDRWWLRLKFQLLVVRDHTLIFFIVQLVVALLGMLVY---RFYGDELREMFGYEEHPYAF 200
            DR W  LKF+  V RD   IF  VQLV+A L  +VY    +    LR ++G++     F
Sbjct: 94  GDRKWRTLKFRFFVTRDILSIFLAVQLVIAALAYMVYFIDSYQQSWLRHIWGFDSE-VTF 152

Query: 201 YAM 203
           Y M
Sbjct: 153 YYM 155




 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 49/76 (64%), Gaps = 6/76 (7%)

Query: 202 AMAILAI-VLVGLLYGFFIAIICGQRITERHYHVLAKQELTKEYIVEDLEGTD-----GV 255
           A+ IL +  ++G+ Y   +A + GQRI +RHYH+LAK+ LTKEY+VED++G         
Sbjct: 248 ALVILGLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTGSEWSP 307

Query: 256 PDLDPNHVTELRILGL 271
           P L   HV +L+ LGL
Sbjct: 308 PALPTEHVQQLKTLGL 323



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.325    0.139    0.433 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,833,815
Number of extensions: 239061
Number of successful extensions: 882
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 884
Number of HSP's successfully gapped: 6
Length of query: 272
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 175
Effective length of database: 8,447,217
Effective search space: 1478262975
Effective search space used: 1478262975
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 111 (47.4 bits)