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Os02g0130600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.05 (0.026) R2 : 0.592
β1 : -1.08 (0.0964) R2dD : 0.123 R2D : 0.0728
β2 : 1.18 (0.0623) R2dC : 0.334 R2C : 0.397
β3 : 0.798 (0.0719) R2dE : 0.122 R2E : 0.119
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.199 (0.0563) R2dN8 : 0.0114 R2N8 : 0.00494
σ : 0.483
deviance : 107.48
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C
peak time of C : 24
E
wheather : temperature
threshold : 29.43
memory length : 1152
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
98.75 0.467 8.14 -1.73 1.2 1.14 1.39 -3.63 0.086 23.9 28.93 1239 -- --
100.05 0.466 8.05 -1.05 1.21 0.778 1.49 -- 0.208 23.7 29.34 1219 -- --
106.95 0.482 8.12 -1.6 1.18 1.06 -- -2.59 0.0928 24 28.82 1217 -- --
107.48 0.483 8.05 -1.08 1.18 0.798 -- -- 0.199 24 29.43 1152 -- --
174.37 0.615 8.11 -1.27 -- 1.5 -- -0.0653 -0.141 -- 24.1 981 -- --
125.01 0.524 8.09 -0.83 1.31 -- 1.51 -- 0.0424 0.00841 -- -- -- --
134.89 0.544 8.09 -0.891 1.31 -- -- -- 0.035 0.087 -- -- -- --
174.37 0.615 8.1 -1.27 -- 1.5 -- -- -0.139 -- 24.09 981 -- --
136.96 0.545 8.04 -- 1.2 0.66 -- -- 0.26 0.0368 31.41 1031 -- --
242.81 0.728 8.06 -0.85 -- -- -- -- 0.0538 -- -- -- -- --
155.81 0.584 8.07 -- 1.3 -- -- -- 0.134 0.0488 -- -- -- --
213.78 0.681 8.06 -- -- 1.23 -- -- 0.0453 -- 24.4 968 -- --
261.85 0.755 8.04 -- -- -- -- -- 0.148 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 90.54 temperature 10.0 270 > th dose dependent rect. 14 16
17 93.35 temperature 15.0 30 > th dose dependent rect. 16 17
20 93.40 temperature 30.0 270 < th dose independent rect. 17 9
23 93.61 humidity 70.0 270 > th dose independent rect. 17 9
52 95.05 radiation 20.0 90 < th dose independent rect. 3 16
55 95.39 radiation 40.0 90 < th dose dependent rect. 3 16
58 95.53 humidity 50.0 270 > th dose dependent rect. 17 8
66 96.02 radiation 1.0 270 < th dose dependent rect. 8 18
71 96.11 radiation 1.0 270 < th dose dependent rect. 12 14
74 96.14 radiation 1.0 270 < th dose independent rect. 17 9
77 96.16 radiation 10.0 270 < th dose dependent rect. 16 10
80 96.27 radiation 1.0 270 < th dose independent rect. 8 18
85 96.34 radiation 1.0 270 < th dose dependent sin 16 NA
87 96.37 radiation 1.0 270 < th dose independent rect. 12 14
93 96.46 radiation 40.0 90 < th dose independent rect. 3 16
100 96.56 radiation 1.0 270 < th dose dependent rect. 5 21
118 96.89 temperature 15.0 270 > th dose dependent rect. 13 8
120 96.91 radiation 1.0 270 > th dose independent sin 16 NA
129 97.06 temperature 30.0 720 < th dose independent rect. 16 5
139 97.19 temperature 20.0 10 > th dose dependent rect. 16 15
144 97.25 radiation 1.0 270 < th dose independent sin 15 NA
183 97.64 precipitation 0.1 90 < th dose independent rect. 3 16
185 97.64 precipitation 0.1 90 < th dose dependent rect. 3 16
197 97.83 radiation 1.0 270 > th dose independent rect. 13 16
198 97.84 radiation 1.0 270 > th dose independent rect. 13 6
233 98.05 radiation 20.0 10 < th dose independent rect. 4 16
242 98.14 temperature 10.0 270 > th dose dependent rect. 2 17
252 98.23 temperature 30.0 720 < th dose independent rect. 16 15
262 98.33 temperature 15.0 270 > th dose dependent rect. 15 2
268 98.43 temperature 30.0 720 < th dose independent rect. 16 13
294 98.72 precipitation 0.1 270 < th dose independent rect. 14 16
295 98.72 precipitation 0.1 270 < th dose dependent rect. 14 16
301 98.75 radiation 40.0 10 < th dose dependent rect. 4 16
315 98.86 temperature 30.0 720 < th dose independent rect. 17 2
330 98.97 temperature 15.0 90 > th dose independent rect. 3 16
332 98.99 temperature 25.0 10 > th dose independent rect. 16 4
334 99.00 temperature 30.0 1440 > th dose dependent rect. 16 1
338 99.03 temperature 10.0 90 > th dose independent rect. 19 8
341 99.03 humidity 50.0 90 > th dose independent rect. 19 8
343 99.03 atmosphere 995.0 90 > th dose independent rect. 19 8
344 99.03 radiation 1.0 90 < th dose independent rect. 19 8
349 99.03 humidity 70.0 10 > th dose independent rect. 19 9
351 99.03 atmosphere 1015.0 90 < th dose independent rect. 3 16
352 99.03 radiation 1.0 90 < th dose dependent rect. 19 8
362 99.07 wind 9.0 90 < th dose independent rect. 19 8
370 99.16 radiation 10.0 1440 > th dose dependent rect. 16 2
383 99.18 wind 9.0 90 < th dose independent rect. 3 16
399 99.29 temperature 20.0 10 > th dose dependent rect. 16 4
403 99.32 temperature 25.0 90 > th dose independent rect. 15 5
429 99.54 temperature 30.0 90 < th dose dependent rect. 18 9
462 99.59 temperature 10.0 1440 > th dose dependent rect. 16 2
486 99.71 atmosphere 995.0 90 > th dose independent rect. 3 16
487 99.71 temperature 30.0 1440 > th dose dependent sin 13 NA
491 99.73 temperature 30.0 720 < th dose independent sin 12 NA
544 99.91 temperature 30.0 720 > th dose independent sin 12 NA
546 99.91 temperature 10.0 270 > th dose dependent rect. 24 8
563 100.00 temperature 25.0 270 > th dose independent rect. 13 7
573 100.04 temperature 30.0 720 > th dose independent rect. 16 17
575 100.06 temperature 30.0 720 > th dose independent rect. 16 3
645 100.28 temperature 30.0 720 < th dose independent rect. 16 18
685 100.36 radiation 1.0 270 > th dose dependent rect. 15 15
698 100.40 radiation 1.0 270 > th dose dependent rect. 15 4
755 100.49 radiation 40.0 10 < th dose dependent rect. 12 22
762 100.51 radiation 10.0 1440 < th dose independent rect. 16 14
826 100.68 radiation 20.0 1440 < th dose independent rect. 16 1
872 100.75 precipitation 0.1 90 < th dose independent rect. 19 8
876 100.75 precipitation 0.1 90 < th dose dependent rect. 19 8
882 100.77 precipitation 0.1 270 < th dose independent rect. 6 8
886 100.77 precipitation 0.1 270 < th dose dependent rect. 6 8
892 100.78 temperature 30.0 10 < th dose dependent rect. 19 9
904 100.82 radiation 10.0 90 > th dose independent rect. 9 6
932 100.85 precipitation 0.1 270 < th dose independent rect. 13 6
934 100.85 precipitation 0.1 270 < th dose dependent rect. 13 6