Os02g0129900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : PGAP1-like family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0129900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : PGAP1-like family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 79.67 | 0.419 | 11.4 | -1.31 | 0.874 | 0.951 | 0.239 | 1.47 | -1.18 | 10.6 | 79.35 | 4398 | -- | -- |
| 82.12 | 0.422 | 11.4 | -1.37 | 0.868 | 1.03 | 0.3 | -- | -1.13 | 10.6 | 76.08 | 4379 | -- | -- |
| 79.91 | 0.416 | 11.4 | -1.29 | 0.873 | 0.945 | -- | 1.51 | -1.19 | 10.6 | 79.76 | 4400 | -- | -- |
| 82.32 | 0.423 | 11.4 | -1.35 | 0.994 | 1.04 | -- | -- | -1.13 | 10.6 | 77.74 | 3814 | -- | -- |
| 122.91 | 0.519 | 11.5 | -1.36 | -- | 0.981 | -- | 0.0424 | -1.1 | -- | 81.78 | 4443 | -- | -- |
| 98.66 | 0.466 | 11.4 | -1.33 | 0.882 | -- | 0.169 | -- | -1.14 | 10.6 | -- | -- | -- | -- |
| 98.78 | 0.465 | 11.4 | -1.32 | 0.881 | -- | -- | -- | -1.14 | 10.6 | -- | -- | -- | -- |
| 122.91 | 0.519 | 11.5 | -1.36 | -- | 0.982 | -- | -- | -1.1 | -- | 81.78 | 4443 | -- | -- |
| 94.56 | 0.453 | 11.4 | -- | 0.876 | 1.39 | -- | -- | -0.843 | 10.6 | 66.19 | 47520 | -- | -- |
| 146.49 | 0.566 | 11.5 | -1.34 | -- | -- | -- | -- | -1.15 | -- | -- | -- | -- | -- |
| 144.63 | 0.563 | 11.4 | -- | 0.89 | -- | -- | -- | -0.997 | 10.7 | -- | -- | -- | -- |
| 135.17 | 0.541 | 11.4 | -- | -- | 1.56 | -- | -- | -0.906 | -- | 64.53 | 34717 | -- | -- |
| 193.51 | 0.649 | 11.4 | -- | -- | -- | -- | -- | -1 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 70.00 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 6 |
| 2 | 70.09 | wind | 1.0 | 14400 | < th | dose independent | rect. | 2 | 6 |
| 4 | 71.34 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 4 |
| 5 | 71.35 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 7 | 71.49 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 6 |
| 16 | 71.89 | wind | 1.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 28 | 72.40 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 5 | 2 |
| 46 | 73.48 | wind | 1.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 63 | 74.11 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 2 |
| 77 | 74.38 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 2 |
| 80 | 74.43 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 24 | 1 |
| 84 | 74.53 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 101 | 74.87 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 103 | 74.92 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 111 | 75.00 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 114 | 75.02 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 11 |
| 115 | 75.02 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 11 |
| 116 | 75.02 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 11 |
| 122 | 75.08 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 14 |
| 123 | 75.11 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 14 |
| 124 | 75.11 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 14 |
| 163 | 75.59 | wind | 1.0 | 14400 | > th | dose independent | sin | 8 | NA |
| 168 | 75.65 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 4 |
| 171 | 75.68 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 9 |
| 175 | 75.70 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 12 |
| 179 | 75.74 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 247 | 76.24 | wind | 1.0 | 14400 | < th | dose independent | sin | 8 | NA |
| 265 | 76.39 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 284 | 76.53 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 11 | 1 |
| 292 | 76.56 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 11 |
| 302 | 76.61 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 354 | 76.89 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 371 | 76.95 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 20 | 10 |
| 385 | 77.04 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 395 | 77.06 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 20 | 10 |
| 396 | 77.07 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 406 | 77.11 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 11 |
| 425 | 77.18 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 22 | 11 |
| 426 | 77.19 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 429 | 77.20 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 1 | NA |
| 432 | 77.20 | wind | 1.0 | 43200 | < th | dose dependent | sin | 7 | NA |
| 433 | 77.20 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 1 | NA |
| 435 | 77.20 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 20 | 12 |
| 436 | 77.21 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 1 | NA |
| 477 | 77.32 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 7 | 2 |
| 524 | 77.43 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 20 | 12 |
| 528 | 77.45 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 530 | 77.46 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 8 | 2 |
| 533 | 77.47 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 544 | 77.48 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 19 | 18 |
| 547 | 77.49 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 565 | 77.55 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 567 | 77.56 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 569 | 77.56 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 2 |
| 576 | 77.57 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 22 | 11 |
| 585 | 77.60 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 1 | NA |
| 586 | 77.60 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 587 | 77.61 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 594 | 77.63 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 1 | 12 |
| 675 | 77.81 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 23 | 14 |
| 699 | 77.87 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 700 | 77.87 | humidity | 60.0 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 709 | 77.88 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 769 | 78.01 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 8 | 6 |
| 785 | 78.03 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 802 | 78.06 | humidity | 80.0 | 4320 | < th | dose dependent | sin | 7 | NA |
| 875 | 78.21 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 3 |
| 909 | 78.27 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 20 | 17 |
| 913 | 78.28 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 8 | 6 |
| 914 | 78.28 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 4 | 9 |
| 923 | 78.29 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 6 | 7 |
| 930 | 78.30 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 23 | 14 |
| 994 | 78.41 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 998 | 78.41 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 2 |