Os02g0128300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ENTH/VHS domain containing protein.
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Os02g0128300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ENTH/VHS domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29.02 | 0.253 | 10.3 | 0.272 | 0.676 | 0.795 | -0.115 | 0.525 | 0.257 | 19.7 | 21 | 1540 | -- | -- |
| 29.31 | 0.252 | 10.3 | 0.193 | 0.674 | 0.732 | -0.106 | -- | 0.225 | 19.5 | 21.4 | 1500 | -- | -- |
| 28.67 | 0.249 | 10.3 | 0.307 | 0.676 | 0.746 | -- | 0.547 | 0.254 | 19.7 | 21.3 | 1527 | -- | -- |
| 29.25 | 0.252 | 10.4 | 0.185 | 0.666 | 0.709 | -- | -- | 0.222 | 19.7 | 21.32 | 1524 | -- | -- |
| 47.53 | 0.321 | 10.3 | 0.307 | -- | 0.732 | -- | 0.356 | 0.231 | -- | 21.4 | 642 | -- | -- |
| 43.05 | 0.308 | 10.3 | 0.473 | 0.674 | -- | -0.0469 | -- | 0.419 | 19.8 | -- | -- | -- | -- |
| 43.05 | 0.307 | 10.3 | 0.474 | 0.674 | -- | -- | -- | 0.419 | 19.8 | -- | -- | -- | -- |
| 47.86 | 0.322 | 10.3 | 0.287 | -- | 0.676 | -- | -- | 0.207 | -- | 21.8 | 692 | -- | -- |
| 29.72 | 0.254 | 10.4 | -- | 0.634 | 0.753 | -- | -- | 0.182 | 19.5 | 21.4 | 2180 | -- | -- |
| 67.63 | 0.384 | 10.3 | 0.466 | -- | -- | -- | -- | 0.409 | -- | -- | -- | -- | -- |
| 48.97 | 0.327 | 10.3 | -- | 0.671 | -- | -- | -- | 0.366 | 19.8 | -- | -- | -- | -- |
| 48.96 | 0.326 | 10.3 | -- | -- | 0.731 | -- | -- | 0.165 | -- | 21.79 | 697 | -- | -- |
| 73.35 | 0.4 | 10.3 | -- | -- | -- | -- | -- | 0.358 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 29.51 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 13 |
| 3 | 29.79 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 4 | 29.92 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 10 |
| 8 | 30.00 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 9 | 30.00 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 10 | 30.01 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 10 |
| 11 | 30.01 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 10 |
| 17 | 30.04 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 10 |
| 19 | 30.05 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 4 |
| 26 | 30.06 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 6 |
| 30 | 30.06 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 18 |
| 51 | 30.11 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 4 |
| 61 | 30.12 | temperature | 25 | 1440 | < th | dose dependent | sin | 13 | NA |
| 75 | 30.14 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 6 |
| 86 | 30.16 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 108 | 30.18 | temperature | 15 | 270 | > th | dose dependent | sin | 8 | NA |
| 115 | 30.19 | temperature | 20 | 1440 | > th | dose independent | sin | 9 | NA |
| 159 | 30.23 | temperature | 30 | 270 | < th | dose dependent | sin | 8 | NA |
| 160 | 30.23 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 195 | 30.26 | temperature | 25 | 270 | < th | dose dependent | rect. | 23 | 22 |
| 249 | 30.31 | temperature | 25 | 1440 | < th | dose dependent | rect. | 9 | 21 |
| 251 | 30.31 | temperature | 25 | 270 | < th | dose dependent | rect. | 21 | 22 |
| 255 | 30.32 | temperature | 20 | 4320 | < th | dose independent | sin | 15 | NA |
| 285 | 30.34 | temperature | 20 | 4320 | > th | dose independent | sin | 15 | NA |
| 331 | 30.37 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 334 | 30.37 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 6 |
| 348 | 30.38 | temperature | 25 | 720 | < th | dose dependent | rect. | 2 | 22 |
| 367 | 30.40 | temperature | 20 | 1440 | < th | dose independent | sin | 9 | NA |
| 375 | 30.40 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 20 |
| 382 | 30.40 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 23 |
| 384 | 30.40 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 529 | 30.50 | temperature | 15 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 543 | 30.51 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 760 | 30.64 | temperature | 30 | 1440 | < th | dose dependent | rect. | 24 | 1 |
| 789 | 30.66 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |