Os02g0122300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0122300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 37.67 | 0.288 | 10.7 | 0.411 | 0.175 | -0.639 | -0.385 | -0.407 | 0.0866 | 8.4 | 24.16 | 8 | -- | -- |
| 38.12 | 0.288 | 10.7 | 0.411 | 0.157 | -0.686 | -0.23 | -- | 0.0843 | 7.07 | 23.5 | 7 | -- | -- |
| 37.93 | 0.287 | 10.7 | 0.407 | 0.181 | -0.628 | -- | -0.207 | 0.0869 | 8.72 | 23.95 | 7 | -- | -- |
| 38.1 | 0.287 | 10.7 | 0.422 | 0.125 | -0.656 | -- | -- | 0.0864 | 7.22 | 17.88 | 7 | -- | -- |
| 38.62 | 0.289 | 10.7 | 0.437 | -- | -0.682 | -- | -0.0764 | 0.106 | -- | 16.79 | 5 | -- | -- |
| 45.33 | 0.316 | 10.7 | 0.428 | 0.739 | -- | 0.221 | -- | 0.0916 | 11.3 | -- | -- | -- | -- |
| 45.54 | 0.316 | 10.7 | 0.437 | 0.738 | -- | -- | -- | 0.0923 | 11.3 | -- | -- | -- | -- |
| 38.69 | 0.29 | 10.7 | 0.426 | -- | -0.683 | -- | -- | 0.089 | -- | 16.57 | 5 | -- | -- |
| 42.66 | 0.304 | 10.7 | -- | 0.148 | -0.687 | -- | -- | 0.0398 | 7.18 | 23.53 | 6 | -- | -- |
| 79.65 | 0.417 | 10.7 | 0.418 | -- | -- | -- | -- | 0.0853 | -- | -- | -- | -- | -- |
| 50.57 | 0.333 | 10.7 | -- | 0.734 | -- | -- | -- | 0.0437 | 11.3 | -- | -- | -- | -- |
| 43.44 | 0.307 | 10.8 | -- | -- | -0.686 | -- | -- | 0.0416 | -- | 17.3 | 6 | -- | -- |
| 84.26 | 0.428 | 10.8 | -- | -- | -- | -- | -- | 0.0389 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.95 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 19 | 15 |
| 7 | 34.91 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 21 |
| 11 | 35.16 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 24 | 5 |
| 12 | 35.16 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 23 | 15 |
| 14 | 35.31 | radiation | 1.0 | 270 | < th | dose independent | rect. | 24 | 16 |
| 17 | 35.35 | radiation | 1.0 | 270 | > th | dose independent | sin | 6 | NA |
| 22 | 35.41 | radiation | 1.0 | 270 | < th | dose dependent | sin | 5 | NA |
| 27 | 35.46 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 23 | 12 |
| 29 | 35.46 | radiation | 30.0 | 30 | < th | dose dependent | rect. | 3 | 16 |
| 30 | 35.48 | radiation | 1.0 | 270 | < th | dose independent | sin | 6 | NA |
| 63 | 35.69 | radiation | 10.0 | 10 | < th | dose dependent | sin | 2 | NA |
| 64 | 35.69 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 1 | 18 |
| 70 | 35.71 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 21 | 15 |
| 72 | 35.72 | wind | 1.0 | 270 | > th | dose independent | rect. | 10 | 9 |
| 75 | 35.74 | radiation | 30.0 | 90 | < th | dose dependent | sin | 5 | NA |
| 90 | 35.82 | radiation | 30.0 | 10 | < th | dose dependent | sin | 4 | NA |
| 110 | 35.89 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 8 |
| 119 | 35.92 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 20 | 18 |
| 127 | 35.95 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 8 |
| 136 | 35.98 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 6 | 19 |
| 140 | 36.00 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 19 |
| 144 | 36.01 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 18 | 6 |
| 178 | 36.10 | wind | 1.0 | 270 | > th | dose independent | rect. | 24 | 18 |
| 190 | 36.14 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 5 | 7 |
| 193 | 36.15 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 10 |
| 200 | 36.17 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 16 |
| 211 | 36.20 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 3 | 11 |
| 252 | 36.31 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 10 |
| 254 | 36.32 | wind | 7.0 | 270 | < th | dose independent | rect. | 23 | 7 |
| 267 | 36.35 | wind | 1.0 | 270 | > th | dose independent | rect. | 24 | 5 |
| 268 | 36.35 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 23 | 7 |
| 271 | 36.35 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 23 | 7 |
| 277 | 36.36 | humidity | 60.0 | 270 | > th | dose independent | rect. | 19 | 15 |
| 282 | 36.37 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 19 | 8 |
| 285 | 36.38 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 10 | 9 |
| 288 | 36.38 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 10 | 9 |
| 309 | 36.43 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 15 |
| 312 | 36.43 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 15 |
| 316 | 36.44 | temperature | 10.0 | 270 | > th | dose independent | rect. | 23 | 7 |
| 317 | 36.44 | temperature | 30.0 | 270 | < th | dose independent | rect. | 23 | 7 |
| 318 | 36.44 | humidity | 50.0 | 270 | > th | dose independent | rect. | 23 | 7 |
| 321 | 36.44 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 23 | 7 |
| 322 | 36.44 | radiation | 20.0 | 270 | < th | dose independent | rect. | 23 | 7 |
| 325 | 36.44 | temperature | 10.0 | 270 | > th | dose independent | rect. | 10 | 9 |
| 326 | 36.44 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 10 | 9 |
| 327 | 36.44 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 15 |
| 328 | 36.44 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 15 |
| 329 | 36.44 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 17 |
| 338 | 36.46 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 3 | 5 |
| 343 | 36.47 | wind | 9.0 | 270 | < th | dose independent | rect. | 19 | 15 |
| 359 | 36.51 | wind | 9.0 | 270 | < th | dose independent | rect. | 10 | 9 |
| 367 | 36.52 | temperature | 10.0 | 10 | > th | dose dependent | sin | 5 | NA |
| 381 | 36.56 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 17 |
| 399 | 36.58 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 8 |
| 408 | 36.59 | wind | 5.0 | 270 | < th | dose independent | rect. | 24 | 5 |
| 410 | 36.59 | temperature | 25.0 | 90 | < th | dose independent | rect. | 1 | 7 |
| 412 | 36.60 | wind | 1.0 | 270 | > th | dose independent | rect. | 23 | 7 |
| 420 | 36.62 | radiation | 20.0 | 30 | < th | dose independent | rect. | 3 | 16 |
| 422 | 36.62 | temperature | 20.0 | 270 | > th | dose independent | rect. | 5 | 19 |
| 427 | 36.62 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 16 |
| 430 | 36.63 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 5 |
| 434 | 36.63 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 5 |
| 449 | 36.65 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 3 | 14 |
| 452 | 36.66 | radiation | 1.0 | 270 | > th | dose independent | rect. | 5 | 8 |
| 458 | 36.68 | temperature | 10.0 | 270 | > th | dose independent | rect. | 24 | 5 |
| 460 | 36.68 | temperature | 30.0 | 270 | < th | dose independent | rect. | 24 | 5 |
| 461 | 36.68 | humidity | 50.0 | 270 | > th | dose independent | rect. | 24 | 5 |
| 464 | 36.68 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 5 |
| 465 | 36.68 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 5 |
| 466 | 36.68 | radiation | 20.0 | 270 | < th | dose independent | rect. | 24 | 5 |
| 479 | 36.68 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 19 |
| 495 | 36.70 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 9 |
| 499 | 36.70 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 9 |
| 502 | 36.71 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 23 | 7 |
| 504 | 36.71 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 15 |
| 513 | 36.73 | radiation | 1.0 | 90 | > th | dose dependent | sin | 7 | NA |
| 548 | 36.76 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 9 |
| 555 | 36.77 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 19 |
| 570 | 36.79 | radiation | 10.0 | 270 | < th | dose independent | rect. | 17 | 8 |
| 574 | 36.80 | radiation | 30.0 | 90 | < th | dose independent | rect. | 1 | 18 |
| 578 | 36.80 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 17 | 7 |
| 579 | 36.80 | wind | 9.0 | 270 | < th | dose dependent | rect. | 5 | 8 |
| 588 | 36.82 | humidity | 60.0 | 270 | > th | dose independent | rect. | 17 | 7 |
| 591 | 36.83 | temperature | 15.0 | 270 | > th | dose independent | rect. | 5 | 8 |
| 600 | 36.83 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 3 | 16 |
| 612 | 36.85 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 16 |
| 633 | 36.86 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 634 | 36.86 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 9 |
| 635 | 36.86 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 15 |
| 660 | 36.88 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 14 |
| 692 | 36.92 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 17 |
| 694 | 36.92 | temperature | 30.0 | 10 | < th | dose dependent | sin | 5 | NA |
| 714 | 36.95 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 3 | 14 |
| 717 | 36.96 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 17 |
| 720 | 36.96 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 17 |
| 726 | 36.97 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 15 |
| 732 | 36.97 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 15 |
| 739 | 36.99 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 8 |
| 743 | 36.99 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 16 |
| 744 | 36.99 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 16 |
| 759 | 37.01 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 10 | 9 |
| 769 | 37.01 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 19 |
| 795 | 37.03 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 16 |
| 801 | 37.03 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 16 |
| 804 | 37.04 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 8 |
| 826 | 37.07 | temperature | 30.0 | 270 | < th | dose independent | rect. | 18 | 6 |
| 829 | 37.07 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 17 | 7 |
| 838 | 37.08 | temperature | 20.0 | 270 | > th | dose independent | rect. | 19 | 16 |
| 839 | 37.08 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 13 | 16 |
| 844 | 37.08 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 3 | 9 |
| 880 | 37.11 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 16 |
| 909 | 37.12 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 18 |
| 922 | 37.14 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 17 |
| 935 | 37.15 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 19 |
| 945 | 37.15 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 19 |
| 955 | 37.17 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 18 | 6 |