BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0122300 Os02g0122300|AK106553
         (231 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G66070.1  | chr1:24596194-24597520 REVERSE LENGTH=227          118   3e-27
AT5G37475.1  | chr5:14866328-14867749 REVERSE LENGTH=226          115   1e-26

>AT1G66070.1 | chr1:24596194-24597520 REVERSE LENGTH=227
          Length = 226

 Score =  118 bits (295), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 54/82 (65%), Positives = 71/82 (86%), Gaps = 1/82 (1%)

Query: 86  DPALEKLRQQRLVEEADFKSTTELFGKKDGSEKSLDTFIPKSESDFAEYAELIANKLRPY 145
           DP  EKLRQQRLVEEAD+++T ELFG KD  +K+LD FIPKSESDF EYAE+I+++++PY
Sbjct: 85  DPIAEKLRQQRLVEEADYRATAELFGVKD-DDKNLDMFIPKSESDFLEYAEMISHRIKPY 143

Query: 146 EKSFHYMGLLKNVMRLSMASLK 167
           EKS+HY+ LLK +MRLS+ ++K
Sbjct: 144 EKSYHYIALLKTIMRLSLTNMK 165



>AT5G37475.1 | chr5:14866328-14867749 REVERSE LENGTH=226
          Length = 225

 Score =  115 bits (289), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 68/146 (46%), Positives = 84/146 (57%), Gaps = 4/146 (2%)

Query: 86  DPALEKLRQQRLVEEADFKSTTELFGKKDGSEKSLDTFIPKSESDFAEYAELIANKLRPY 145
           DP  EKLR QRLVEEAD++ST ELFG K   EKS+D  IPKSESDF +YAELI+ +L P+
Sbjct: 84  DPIAEKLRMQRLVEEADYQSTAELFGVK-TEEKSVDMLIPKSESDFLDYAELISQRLVPF 142

Query: 146 EKSFHYMGLLKNVMRLSMASLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 205
           EKSFHY+GLLK VMRLS+A++K                                      
Sbjct: 143 EKSFHYIGLLKAVMRLSVANMK-AADVKDVASSITAIANEKLKAEKEAAAGKKKSGKKKQ 201

Query: 206 LHIENKDDDFIPGKGNFDDPDEYDFM 231
           LH++  DDD +   G +D  D+ DFM
Sbjct: 202 LHVDKPDDDLV--SGPYDAMDDDDFM 225



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.313    0.132    0.379 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,336,008
Number of extensions: 91375
Number of successful extensions: 238
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 236
Number of HSP's successfully gapped: 2
Length of query: 231
Length of database: 11,106,569
Length adjustment: 95
Effective length of query: 136
Effective length of database: 8,502,049
Effective search space: 1156278664
Effective search space used: 1156278664
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 110 (47.0 bits)