Os02g0117100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0117100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 58.63 | 0.36 | 12.8 | -1.32 | 1.29 | -0.816 | 0.101 | -2.45 | -0.816 | 7.69 | 0.1905 | 5391 | -- | -- |
| 51.77 | 0.335 | 12.7 | -0.878 | 1.26 | -1.34 | -0.0916 | -- | -0.827 | 7.82 | 0.8974 | 23899 | -- | -- |
| 58.66 | 0.357 | 12.8 | -1.32 | 1.29 | -0.815 | -- | -2.44 | -0.817 | 7.69 | 0.2026 | 5366 | -- | -- |
| 51.69 | 0.335 | 12.7 | -0.878 | 1.25 | -1.35 | -- | -- | -0.828 | 7.82 | 0.8649 | 23803 | -- | -- |
| 145.72 | 0.562 | 12.8 | -1.31 | -- | -0.831 | -- | -2.13 | -0.79 | -- | 0.249 | 4834 | -- | -- |
| 93.76 | 0.454 | 12.7 | -1.68 | 1.28 | -- | 0.0376 | -- | -0.709 | 7.76 | -- | -- | -- | -- |
| 93.76 | 0.453 | 12.7 | -1.68 | 1.28 | -- | -- | -- | -0.709 | 7.76 | -- | -- | -- | -- |
| 136.26 | 0.544 | 12.8 | -0.667 | -- | -1.34 | -- | -- | -0.84 | -- | 1.091 | 32211 | -- | -- |
| 56.18 | 0.349 | 12.7 | -- | 1.26 | -1.35 | -- | -- | -0.866 | 7.91 | 1.5 | 47520 | -- | -- |
| 181.9 | 0.63 | 12.7 | -1.66 | -- | -- | -- | -- | -0.691 | -- | -- | -- | -- | -- |
| 167.79 | 0.606 | 12.7 | -- | 1.26 | -- | -- | -- | -0.522 | 7.85 | -- | -- | -- | -- |
| 141.97 | 0.555 | 12.8 | -- | -- | -1.35 | -- | -- | -0.853 | -- | 1.5 | 47520 | -- | -- |
| 254.59 | 0.745 | 12.7 | -- | -- | -- | -- | -- | -0.507 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 49.64 | precipitation | 1e-01 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 2 | 49.74 | precipitation | 1e-01 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 3 | 49.74 | precipitation | 1e-01 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 4 | 49.76 | precipitation | 1e-01 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 10 | 54.39 | wind | 9e+00 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 11 | 54.53 | precipitation | 1e-01 | 14400 | > th | dose independent | rect. | 17 | 6 |
| 12 | 54.59 | precipitation | 1e-01 | 14400 | < th | dose independent | rect. | 17 | 6 |
| 13 | 54.59 | precipitation | 1e-01 | 14400 | < th | dose dependent | rect. | 17 | 6 |
| 21 | 55.38 | wind | 9e+00 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 23 | 55.45 | humidity | 8e+01 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 25 | 55.72 | wind | 9e+00 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 30 | 55.94 | precipitation | 1e-01 | 14400 | > th | dose dependent | rect. | 17 | 7 |
| 39 | 56.18 | radiation | 1e+00 | 43200 | < th | dose dependent | rect. | 21 | 7 |
| 40 | 56.23 | precipitation | 1e-01 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 53 | 56.52 | precipitation | 1e-01 | 4320 | > th | dose dependent | rect. | 21 | 21 |
| 54 | 56.58 | precipitation | 1e-01 | 14400 | > th | dose dependent | rect. | 13 | 10 |
| 100 | 56.87 | humidity | 8e+01 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 163 | 57.34 | precipitation | 1e-01 | 14400 | > th | dose dependent | sin | 17 | NA |
| 172 | 57.39 | precipitation | 1e-01 | 4320 | < th | dose independent | rect. | 13 | 5 |
| 175 | 57.39 | precipitation | 1e-01 | 4320 | < th | dose dependent | rect. | 13 | 5 |
| 176 | 57.39 | wind | 9e+00 | 43200 | > th | dose dependent | rect. | 19 | 6 |
| 185 | 57.43 | wind | 9e+00 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 192 | 57.49 | precipitation | 1e-01 | 4320 | > th | dose independent | rect. | 13 | 5 |
| 193 | 57.49 | wind | 9e+00 | 43200 | > th | dose dependent | rect. | 17 | 13 |
| 197 | 57.50 | wind | 9e+00 | 43200 | > th | dose dependent | rect. | 19 | 9 |
| 228 | 57.64 | radiation | 1e+00 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 316 | 58.09 | wind | 9e+00 | 43200 | > th | dose dependent | rect. | 17 | 6 |
| 334 | 58.24 | precipitation | 1e-01 | 4320 | > th | dose dependent | sin | 0 | NA |
| 356 | 58.33 | wind | 9e+00 | 43200 | > th | dose dependent | rect. | 17 | 8 |
| 386 | 58.48 | precipitation | 1e-01 | 14400 | > th | dose independent | sin | 18 | NA |
| 387 | 58.48 | precipitation | 1e-01 | 4320 | > th | dose independent | rect. | 6 | 12 |
| 391 | 58.49 | precipitation | 1e-01 | 14400 | < th | dose independent | sin | 18 | NA |
| 395 | 58.49 | precipitation | 1e-01 | 14400 | < th | dose dependent | sin | 18 | NA |
| 419 | 58.57 | precipitation | 1e-01 | 14400 | > th | dose dependent | rect. | 17 | 14 |
| 485 | 58.81 | precipitation | 1e-01 | 4320 | > th | dose independent | rect. | 4 | 14 |
| 487 | 58.82 | precipitation | 1e-01 | 4320 | < th | dose independent | rect. | 4 | 14 |
| 492 | 58.82 | precipitation | 1e-01 | 4320 | < th | dose dependent | rect. | 4 | 14 |
| 504 | 58.90 | wind | 9e+00 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 533 | 58.99 | atmosphere | 1e+03 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 582 | 59.18 | atmosphere | 1e+03 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 587 | 59.18 | precipitation | 1e-01 | 14400 | > th | dose dependent | rect. | 17 | 21 |
| 654 | 59.42 | precipitation | 1e-01 | 4320 | > th | dose dependent | rect. | 13 | 21 |
| 655 | 59.43 | wind | 9e+00 | 43200 | > th | dose independent | rect. | 19 | 6 |
| 691 | 59.51 | precipitation | 1e-01 | 4320 | > th | dose dependent | rect. | 15 | 23 |
| 702 | 59.56 | precipitation | 1e-01 | 4320 | > th | dose dependent | rect. | 15 | 19 |
| 707 | 59.58 | humidity | 9e+01 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 714 | 59.59 | precipitation | 1e-01 | 4320 | > th | dose dependent | rect. | 1 | 23 |
| 725 | 59.61 | precipitation | 1e-01 | 4320 | > th | dose dependent | no | NA | NA |
| 761 | 59.71 | humidity | 8e+01 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 764 | 59.74 | wind | 9e+00 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 851 | 59.94 | wind | 9e+00 | 43200 | > th | dose independent | rect. | 19 | 8 |
| 990 | 60.25 | humidity | 9e+01 | 14400 | < th | dose dependent | rect. | 17 | 2 |