BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0117100 Os02g0117100|AK064929
         (377 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G73060.1  | chr1:27479027-27481258 FORWARD LENGTH=359          465   e-131
AT5G48790.1  | chr5:19780010-19781977 REVERSE LENGTH=317           63   3e-10

>AT1G73060.1 | chr1:27479027-27481258 FORWARD LENGTH=359
          Length = 358

 Score =  465 bits (1197), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 229/315 (72%), Positives = 268/315 (85%)

Query: 63  RAGVSVYKPRSYDVLVSDAARSLACAMDEGKTRLEIEFPPLPSNISSYKGSSDEFIDANI 122
           R GV +YKP+SY+VL +DAA SLA A+ + K+RLEI+FPPLPS+ISSYKGSSD+FIDANI
Sbjct: 44  RRGVPLYKPKSYEVLATDAANSLAFALQDSKSRLEIDFPPLPSSISSYKGSSDDFIDANI 103

Query: 123 QLALAVARKLKELKGTRSCIVFPDLPEKRRASQLFGTALDSIETATISSLDEVSTGPVNT 182
           QLA+ V RKL+E   TR+CIVFPD PEKRRASQ F  A DS++  +I SLD++    V  
Sbjct: 104 QLAVTVVRKLQEKIETRACIVFPDKPEKRRASQRFKAAFDSVDGISIGSLDDIPGTSVTN 163

Query: 183 FFRSMRDTLDFDFADDVEDRWKSDEPPSLYIFINCSTRDLSTIEKYVEQFASSVPALLFN 242
           FFRS+R TLDFDF D+ E  W+  EPP+LYIFINCSTR+LS IEK+VE FASS PALLFN
Sbjct: 164 FFRSIRSTLDFDFEDENEGTWEPKEPPTLYIFINCSTRELSFIEKFVETFASSTPALLFN 223

Query: 243 LELDTLRSDLGLLGFPPKDLHYRFLSQFTPVFYIRQRDYSKTIAVTPYIVNYSGAVFRQY 302
           LELDTLR+DLGLLGFPPKDLHYRFLSQF PVFYIR R+YSKT+AV P+++NY+GA+FRQY
Sbjct: 224 LELDTLRADLGLLGFPPKDLHYRFLSQFIPVFYIRTREYSKTVAVAPFVLNYNGALFRQY 283

Query: 303 PGPWQVMLKQADGSYACVAESAARFTLGQAKEELLRVLGLQEEQGSSLEFLRRGYKNATW 362
           PGPWQVMLKQ DGS+ACVAES  RFTLG+ KEELL+VLGLQEE+GSSLEFLRRGYK+ATW
Sbjct: 284 PGPWQVMLKQTDGSFACVAESPTRFTLGETKEELLQVLGLQEEKGSSLEFLRRGYKSATW 343

Query: 363 WEENVDQEKSSAWRT 377
           WEE+V+ E SS WR 
Sbjct: 344 WEEDVELEASSNWRN 358



>AT5G48790.1 | chr5:19780010-19781977 REVERSE LENGTH=317
          Length = 316

 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 119/277 (42%), Gaps = 41/277 (14%)

Query: 71  PRSYDVLVSDAARSLACAMDEGKTRLEIEFPPLPSNISSYKGSSD---EFIDANIQLALA 127
           PR Y  L++ A  ++  A+ + K  +EIEFP   S ++S  G  +   E  ++   +   
Sbjct: 68  PRDYVELINQAKEAVEMALKDEKQLMEIEFPT--SGLASVPGDGEGATEMTESINMIREF 125

Query: 128 VARKLKELKGTRSCIVFPDLPEKRRASQ-LFGTALDSIETATISSLDEVSTGPVNTFFRS 186
             R L   K   + I FP+  E + A + +FG     ++  T  SL E            
Sbjct: 126 CDRLLAPEKARSTRIFFPEANEVKFAQKTVFGGTYFKLDYLTKPSLFE------------ 173

Query: 187 MRDTLDFDFADDVE--DRWKSDEPPSLYIFINCSTRDLSTIEK-YVEQFASSVPALL-FN 242
                DF F + V+  DR K ++   L  +   +  ++  +E+ Y E   ++   L+ FN
Sbjct: 174 -----DFGFFERVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVVNTDRKLIIFN 228

Query: 243 LELDTLRSDLGLLGFPPK--DLHYRFLSQFTPVFYIRQRDYSKTIAVTPYIVNYSGAVFR 300
            ELD +RS      F PK   L    L +   V+YI      K            G +FR
Sbjct: 229 GELDRIRSGYYPKFFYPKLAALTKTLLPKMETVYYIHNFKGQK-----------GGVLFR 277

Query: 301 QYPGPWQVMLKQADGSYACVAESAARFTLGQAKEELL 337
            YPGPWQV L++    Y CV +  +  +L +   ++L
Sbjct: 278 CYPGPWQV-LRRTRNKYICVHQQESMPSLKEVALDIL 313



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.318    0.133    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,406,875
Number of extensions: 306545
Number of successful extensions: 689
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 688
Number of HSP's successfully gapped: 2
Length of query: 377
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 277
Effective length of database: 8,364,969
Effective search space: 2317096413
Effective search space used: 2317096413
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 112 (47.8 bits)