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Os02g0116800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Remorin, C-terminal region domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.46 (0.0339) R2 : 0.799
β1 : 0.775 (0.124) R2dD : 0.0188 R2D : 0.0193
β2 : 4.3 (0.103) R2dC : 1.1 R2C : 0.483
β3 : 2.61 (0.123) R2dE : 0.285 R2E : -0.311
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.102 (0.0724) R2dN8 : 0.00137 R2N8 : -0.00583
σ : 0.629
deviance : 182.57
__
_____
C
peak time of C : 19.5
E
wheather : temperature
threshold : 13.01
memory length : 328
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 23
open length of G : 5.67

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
180.57 0.631 6.42 0.979 4.24 2.51 1.02 1.75 0.179 19.5 10.89 277 23 5.98
183.16 0.63 6.43 0.865 4.21 2.5 0.76 -- 0.154 19.6 12.05 288 23 6
182.74 0.63 6.43 0.933 4.23 2.56 -- 1.03 0.156 19.5 11.68 288 23 5.96
182.57 0.629 6.46 0.775 4.3 2.61 -- -- 0.102 19.5 13.01 328 23 5.67
808.71 1.33 6.29 0.946 -- 1.08 -- 0.547 0.269 -- 3.334 10183 22.4 6.45
264.22 0.762 6.38 1.02 3.27 -- 0.782 -- 0.283 21.1 -- -- -- --
266.33 0.764 6.38 0.991 3.27 -- -- -- 0.283 21 -- -- -- --
627.15 1.17 6.93 -0.766 -- 3.75 -- -- 0.161 -- -14.19 7944 14.4 3.58
198.61 0.656 6.47 -- 4.36 2.72 -- -- 0.0174 19.5 13.47 346 22.8 5.72
881.7 1.39 6.3 0.996 -- -- -- -- 0.263 -- -- -- -- --
292.21 0.8 6.41 -- 3.27 -- -- -- 0.172 21.1 -- -- -- --
352.87 0.875 6.38 -- -- 4.5 -- -- -0.0277 -- -13.16 3535 14.8 4.03
907.89 1.41 6.32 -- -- -- -- -- 0.152 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 180.91 temperature 10.0 270 > th dose dependent rect. 23 6
5 183.50 wind 7.0 270 < th dose dependent rect. 23 6
7 183.80 temperature 15.0 270 > th dose dependent rect. 1 3
11 184.95 wind 3.0 90 < th dose dependent rect. 1 4
17 185.61 wind 3.0 270 < th dose independent rect. 24 5
20 186.12 wind 3.0 270 < th dose independent rect. 1 3
32 187.51 temperature 20.0 270 > th dose independent rect. 24 5
36 187.74 temperature 15.0 10 > th dose dependent rect. 2 4
39 187.86 temperature 15.0 90 > th dose dependent rect. 3 2
40 187.98 temperature 20.0 90 > th dose independent rect. 3 2
51 189.54 temperature 20.0 270 > th dose independent rect. 1 3
60 189.94 precipitation 0.1 270 < th dose independent rect. 23 6
61 189.94 precipitation 0.1 270 < th dose dependent rect. 23 6
64 190.00 temperature 20.0 10 > th dose independent rect. 2 4
70 190.28 humidity 50.0 270 > th dose dependent rect. 23 6
73 190.56 humidity 80.0 90 > th dose dependent rect. 3 2
77 190.86 wind 3.0 90 < th dose independent rect. 3 2
81 191.05 temperature 15.0 270 > th dose independent rect. 5 18
85 191.13 precipitation 0.1 90 < th dose independent rect. 3 2
87 191.13 precipitation 0.1 90 < th dose dependent rect. 3 2
91 191.29 temperature 10.0 270 > th dose dependent rect. 10 19
92 191.52 humidity 50.0 270 > th dose dependent rect. 1 2
99 191.97 radiation 1.0 270 < th dose independent rect. 23 6
101 191.99 radiation 10.0 270 < th dose dependent rect. 23 6
105 192.05 wind 9.0 270 < th dose independent rect. 23 6
106 192.05 temperature 10.0 270 > th dose independent rect. 23 6
107 192.05 temperature 30.0 270 < th dose independent rect. 23 6
108 192.05 humidity 50.0 270 > th dose independent rect. 23 6
111 192.05 atmosphere 995.0 270 > th dose independent rect. 23 6
121 192.23 temperature 15.0 90 > th dose independent rect. 5 22
135 192.92 temperature 15.0 270 > th dose independent rect. 3 22
139 192.98 precipitation 0.1 270 < th dose independent rect. 1 2
140 192.98 precipitation 0.1 270 < th dose dependent rect. 1 2
141 193.04 radiation 1.0 90 < th dose independent rect. 3 2
144 193.05 wind 9.0 90 < th dose independent rect. 3 2
145 193.05 temperature 10.0 90 > th dose independent rect. 3 2
147 193.05 temperature 30.0 90 < th dose independent rect. 3 2
148 193.05 humidity 50.0 90 > th dose independent rect. 3 2
151 193.05 atmosphere 995.0 90 > th dose independent rect. 3 2
152 193.05 atmosphere 1010.0 90 < th dose independent rect. 3 2
158 193.07 radiation 30.0 90 < th dose dependent rect. 3 2
168 193.29 temperature 10.0 270 > th dose independent rect. 1 2
170 193.29 temperature 30.0 270 < th dose independent rect. 1 2
171 193.29 humidity 50.0 270 > th dose independent rect. 1 2
174 193.29 atmosphere 995.0 270 > th dose independent rect. 1 2
175 193.29 atmosphere 1010.0 270 < th dose independent rect. 1 2
177 193.29 radiation 1.0 270 < th dose independent rect. 1 2
183 193.29 radiation 1.0 270 < th dose dependent rect. 1 2
188 193.30 wind 9.0 270 < th dose independent rect. 1 2
193 193.49 atmosphere 1015.0 270 < th dose independent rect. 23 6
200 193.62 wind 5.0 10 < th dose dependent rect. 2 4
237 194.16 humidity 90.0 90 > th dose independent rect. 3 2
250 194.46 wind 9.0 270 < th dose independent rect. 5 18
288 195.26 radiation 40.0 1440 < th dose dependent rect. 18 9
291 195.32 wind 9.0 90 < th dose independent rect. 5 22
304 195.72 atmosphere 995.0 270 > th dose independent rect. 5 18
312 196.02 precipitation 0.1 10 < th dose independent rect. 2 4
313 196.02 precipitation 0.1 10 < th dose dependent rect. 2 4
341 196.88 temperature 15.0 10 > th dose independent rect. 6 20
345 196.91 wind 9.0 270 < th dose independent rect. 3 22
348 196.93 precipitation 0.1 270 < th dose independent rect. 11 18
350 196.93 precipitation 0.1 270 < th dose dependent rect. 11 18
362 197.22 radiation 30.0 10 < th dose dependent rect. 2 4
364 197.27 atmosphere 1015.0 90 < th dose dependent rect. 3 2
368 197.35 atmosphere 995.0 90 > th dose independent rect. 5 22
370 197.38 humidity 50.0 10 > th dose dependent rect. 2 4
407 197.70 atmosphere 1015.0 270 < th dose independent rect. 5 18
409 197.82 wind 9.0 10 < th dose independent rect. 2 4
410 197.82 temperature 10.0 10 > th dose independent rect. 2 4
412 197.82 temperature 30.0 10 < th dose independent rect. 2 4
413 197.82 humidity 50.0 10 > th dose independent rect. 2 4
416 197.82 atmosphere 995.0 10 > th dose independent rect. 2 4
417 197.82 atmosphere 1010.0 10 < th dose independent rect. 2 4
419 197.82 radiation 20.0 10 < th dose independent rect. 2 4
430 197.89 wind 7.0 43200 > th dose dependent rect. 4 11
436 197.96 wind 7.0 43200 > th dose dependent rect. 8 7
442 198.05 radiation 40.0 270 < th dose independent rect. 5 19
459 198.27 precipitation 0.1 270 < th dose independent rect. 5 18
460 198.27 precipitation 0.1 270 < th dose dependent rect. 5 18
462 198.30 wind 7.0 270 < th dose independent rect. 11 18
463 198.32 wind 9.0 43200 < th dose independent rect. 2 13
473 198.43 radiation 40.0 270 < th dose independent rect. 5 6
512 198.87 radiation 30.0 1440 < th dose independent rect. 3 4
521 198.98 wind 9.0 43200 > th dose independent rect. 9 6
526 199.01 temperature 25.0 720 > th dose dependent rect. 17 5
530 199.05 wind 9.0 43200 < th dose independent rect. 8 7
535 199.07 wind 9.0 43200 > th dose independent rect. 18 21
545 199.16 temperature 10.0 10 > th dose dependent rect. 12 18
556 199.29 temperature 30.0 270 < th dose independent rect. 5 5
565 199.35 wind 9.0 43200 < th dose independent rect. 18 21
577 199.51 wind 9.0 10 < th dose independent rect. 6 20
578 199.52 atmosphere 995.0 90 > th dose dependent rect. 3 2
592 199.65 atmosphere 995.0 10 > th dose independent rect. 6 20
600 199.72 wind 9.0 43200 > th dose independent rect. 2 13
601 199.72 wind 9.0 43200 > th dose independent rect. 24 15
697 200.18 wind 9.0 43200 > th dose independent rect. 10 4
730 200.28 precipitation 0.1 10 < th dose independent rect. 6 20
732 200.28 precipitation 0.1 10 < th dose dependent rect. 6 20
739 200.32 radiation 1.0 270 < th dose dependent sin 8 NA
783 200.52 wind 7.0 43200 > th dose dependent sin 2 NA
822 200.77 humidity 70.0 1440 > th dose independent rect. 3 4
846 200.83 precipitation 0.1 90 < th dose independent rect. 5 22
849 200.83 precipitation 0.1 90 < th dose dependent rect. 5 22
872 201.03 radiation 1.0 90 < th dose dependent rect. 3 13
879 201.11 wind 9.0 1440 < th dose independent rect. 3 4
880 201.11 temperature 10.0 1440 > th dose independent rect. 3 4
883 201.11 temperature 30.0 1440 < th dose independent rect. 3 4
887 201.11 humidity 50.0 1440 > th dose independent rect. 3 4
892 201.11 atmosphere 995.0 1440 > th dose independent rect. 3 4
897 201.11 temperature 10.0 1440 > th dose independent rect. 7 20
922 201.34 humidity 50.0 270 > th dose independent rect. 5 6
925 201.36 temperature 25.0 720 > th dose dependent rect. 17 16
926 201.37 temperature 15.0 270 > th dose independent rect. 5 6
950 201.47 atmosphere 995.0 270 > th dose independent rect. 5 6
951 201.47 atmosphere 1015.0 270 < th dose independent rect. 5 6
952 201.47 temperature 10.0 270 > th dose independent rect. 11 18
960 201.55 precipitation 0.1 270 < th dose independent rect. 5 6
962 201.55 precipitation 0.1 270 < th dose dependent rect. 5 6
971 201.69 radiation 1.0 90 < th dose dependent sin 4 NA
976 201.71 wind 9.0 43200 < th dose independent sin 1 NA
981 201.73 wind 9.0 270 < th dose independent rect. 5 6
990 201.77 wind 7.0 90 < th dose independent rect. 13 16