Os02g0104200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0104200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.24 | 0.206 | 12.4 | -0.119 | 0.319 | -0.625 | 0.649 | -0.33 | 0.334 | 1.95 | 24.28 | 19 | -- | -- |
| 19.34 | 0.205 | 12.4 | -0.165 | 0.319 | -0.588 | 0.543 | -- | 0.321 | 1.96 | 24.46 | 2 | -- | -- |
| 20.42 | 0.212 | 12.4 | -0.203 | 0.314 | -0.578 | -- | 0.155 | 0.317 | 1.87 | 24.28 | 19 | -- | -- |
| 20.43 | 0.212 | 12.4 | -0.18 | 0.312 | -0.61 | -- | -- | 0.328 | 1.83 | 23.8 | 4 | -- | -- |
| 23.05 | 0.224 | 12.4 | -0.218 | -- | -0.587 | -- | 0.00405 | 0.294 | -- | 28.46 | 1132 | -- | -- |
| 24.4 | 0.232 | 12.4 | -0.03 | 0.215 | -- | 0.562 | -- | 0.426 | 2.33 | -- | -- | -- | -- |
| 25.56 | 0.237 | 12.4 | -0.0455 | 0.216 | -- | -- | -- | 0.422 | 2.28 | -- | -- | -- | -- |
| 23.05 | 0.224 | 12.4 | -0.213 | -- | -0.582 | -- | -- | 0.296 | -- | 28.5 | 1128 | -- | -- |
| 21.21 | 0.216 | 12.4 | -- | 0.298 | -0.541 | -- | -- | 0.357 | 1.85 | 23.8 | 2 | -- | -- |
| 28.33 | 0.249 | 12.4 | -0.0364 | -- | -- | -- | -- | 0.428 | -- | -- | -- | -- | -- |
| 25.62 | 0.237 | 12.4 | -- | 0.215 | -- | -- | -- | 0.427 | 2.27 | -- | -- | -- | -- |
| 24.08 | 0.229 | 12.4 | -- | -- | -0.484 | -- | -- | 0.337 | -- | 28.68 | 1114 | -- | -- |
| 28.37 | 0.249 | 12.4 | -- | -- | -- | -- | -- | 0.432 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.82 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 16 | 16 |
| 2 | 18.83 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 17 | 14 |
| 3 | 18.83 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 15 | 16 |
| 42 | 18.98 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 12 | 20 |
| 87 | 19.12 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 114 | 19.19 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 24 | 5 |
| 117 | 19.19 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 10 | 22 |
| 120 | 19.20 | temperature | 30.0 | 270 | < th | dose dependent | sin | 12 | NA |
| 121 | 19.20 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 145 | 19.23 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 172 | 19.26 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 173 | 19.26 | temperature | 10.0 | 270 | > th | dose dependent | sin | 11 | NA |
| 239 | 19.32 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 240 | 19.32 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 243 | 19.33 | temperature | 25.0 | 10 | < th | dose dependent | no | NA | NA |
| 250 | 19.33 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 261 | 19.35 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 280 | 19.36 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 282 | 19.36 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 287 | 19.37 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 288 | 19.37 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 302 | 19.38 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 306 | 19.39 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 20 | 9 |
| 315 | 19.40 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 20 | 9 |
| 339 | 19.41 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 362 | 19.43 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 394 | 19.45 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 476 | 19.49 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 685 | 19.56 | temperature | 25.0 | 720 | < th | dose dependent | sin | 16 | NA |
| 715 | 19.57 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 13 | NA |
| 754 | 19.58 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 755 | 19.58 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 759 | 19.58 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 2 |