Os01g0978000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Uncoupling protein.
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Os01g0978000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Uncoupling protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 91.01 | 0.448 | 7.84 | -1.32 | 0.79 | 1.28 | 0.877 | -1.63 | -0.167 | 20.1 | 22.13 | 1070 | -- | -- |
| 97.61 | 0.46 | 7.8 | -0.789 | 0.836 | 1.29 | 0.518 | -- | -0.0499 | 20.1 | 22.3 | 1147 | -- | -- |
| 92.12 | 0.447 | 7.85 | -1.3 | 0.817 | 1.29 | -- | -1.48 | -0.165 | 20.1 | 22.2 | 1153 | -- | -- |
| 98.49 | 0.462 | 7.79 | -0.814 | 0.827 | 1.29 | -- | -- | -0.0489 | 20.1 | 22.3 | 1147 | -- | -- |
| 124.21 | 0.519 | 7.82 | -1.23 | -- | 1.35 | -- | -1.26 | -0.177 | -- | 22.3 | 910 | -- | -- |
| 164.71 | 0.602 | 7.7 | -0.349 | 0.91 | -- | 0.447 | -- | 0.388 | 20.7 | -- | -- | -- | -- |
| 165.37 | 0.602 | 7.7 | -0.365 | 0.908 | -- | -- | -- | 0.387 | 20.8 | -- | -- | -- | -- |
| 128.54 | 0.528 | 7.78 | -0.869 | -- | 1.42 | -- | -- | -0.07 | -- | 22 | 852 | -- | -- |
| 114.33 | 0.498 | 7.76 | -- | 0.8 | 1.1 | -- | -- | 0.094 | 20 | 22.38 | 1042 | -- | -- |
| 212.09 | 0.681 | 7.67 | -0.366 | -- | -- | -- | -- | 0.38 | -- | -- | -- | -- | -- |
| 168.87 | 0.608 | 7.69 | -- | 0.909 | -- | -- | -- | 0.428 | 20.7 | -- | -- | -- | -- |
| 145.12 | 0.561 | 7.75 | -- | -- | 1.2 | -- | -- | 0.0603 | -- | 22.3 | 841 | -- | -- |
| 215.62 | 0.685 | 7.67 | -- | -- | -- | -- | -- | 0.421 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 86.62 | temperature | 15 | 720 | > th | dose dependent | rect. | 20 | 17 |
| 12 | 87.88 | temperature | 15 | 720 | > th | dose dependent | sin | 7 | NA |
| 25 | 89.02 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 26 | 89.02 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 37 | 89.32 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 18 |
| 73 | 90.13 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 189 | 91.43 | temperature | 15 | 1440 | > th | dose dependent | rect. | 21 | 9 |
| 306 | 92.26 | temperature | 30 | 720 | < th | dose dependent | sin | 9 | NA |
| 471 | 93.12 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 611 | 93.88 | temperature | 15 | 270 | > th | dose dependent | rect. | 24 | 22 |
| 750 | 94.69 | temperature | 30 | 270 | < th | dose dependent | rect. | 6 | 17 |
| 787 | 94.91 | temperature | 15 | 720 | > th | dose dependent | rect. | 14 | 23 |
| 930 | 95.70 | temperature | 15 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 963 | 95.92 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |