Os01g0973300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Adaptin, N-terminal domain containing protein.
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Os01g0973300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Adaptin, N-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 53.19 | 0.343 | 8.69 | 0.593 | 0.172 | 1.25 | -0.575 | -0.212 | -0.0683 | 4.16 | 14.01 | 412 | -- | -- |
| 53.21 | 0.34 | 8.69 | 0.628 | 0.164 | 1.24 | -0.546 | -- | -0.0583 | 4.22 | 13.61 | 427 | -- | -- |
| 53.95 | 0.342 | 8.68 | 0.666 | 0.177 | 1.25 | -- | 0.209 | -0.0493 | 3.52 | 12.68 | 403 | -- | -- |
| 53.98 | 0.342 | 8.69 | 0.632 | 0.2 | 1.27 | -- | -- | -0.0577 | 3.09 | 12.33 | 365 | -- | -- |
| 54.89 | 0.345 | 8.68 | 0.678 | -- | 1.12 | -- | 0.134 | -0.0316 | -- | 13.61 | 516 | -- | -- |
| 70.26 | 0.393 | 8.65 | 0.919 | 0.221 | -- | 0.722 | -- | 0.125 | 18.5 | -- | -- | -- | -- |
| 71.33 | 0.396 | 8.65 | 0.907 | 0.23 | -- | -- | -- | 0.127 | 19.6 | -- | -- | -- | -- |
| 54.9 | 0.345 | 8.69 | 0.652 | -- | 1.12 | -- | -- | -0.0386 | -- | 13.65 | 517 | -- | -- |
| 63.44 | 0.371 | 8.71 | -- | 0.298 | 1.58 | -- | -- | -0.17 | 3.46 | 12.39 | 345 | -- | -- |
| 74.17 | 0.402 | 8.65 | 0.903 | -- | -- | -- | -- | 0.123 | -- | -- | -- | -- | -- |
| 93 | 0.451 | 8.68 | -- | 0.223 | -- | -- | -- | 0.0256 | 19.9 | -- | -- | -- | -- |
| 65 | 0.375 | 8.71 | -- | -- | 1.35 | -- | -- | -0.141 | -- | 14.1 | 588 | -- | -- |
| 95.7 | 0.457 | 8.67 | -- | -- | -- | -- | -- | 0.0228 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 51.64 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 18 |
| 3 | 51.88 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 7 | 52.02 | temperature | 10 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 28 | 52.83 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 15 |
| 53 | 53.26 | temperature | 15 | 720 | > th | dose dependent | sin | 5 | NA |
| 89 | 53.66 | temperature | 15 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 102 | 53.79 | temperature | 15 | 270 | > th | dose dependent | rect. | 23 | 23 |
| 116 | 53.95 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 121 | 54.00 | temperature | 15 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 136 | 54.13 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 16 |
| 169 | 54.35 | temperature | 15 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 179 | 54.38 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 18 |
| 205 | 54.51 | temperature | 30 | 720 | < th | dose dependent | sin | 5 | NA |
| 318 | 54.98 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 20 |
| 363 | 55.08 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 18 |
| 419 | 55.18 | temperature | 10 | 270 | > th | dose dependent | sin | 23 | NA |
| 459 | 55.25 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 11 |
| 471 | 55.26 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 23 |
| 606 | 55.45 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 764 | 55.65 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 2 |
| 781 | 55.67 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 788 | 55.67 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 15 |
| 870 | 55.75 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 5 |
| 887 | 55.77 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 3 |
| 888 | 55.77 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 5 |
| 899 | 55.78 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 9 |
| 901 | 55.78 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 916 | 55.79 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 3 |
| 932 | 55.80 | temperature | 20 | 4320 | < th | dose independent | rect. | 19 | 4 |