Os01g0971500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cytochrome b5.
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Os01g0971500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Cytochrome b5.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 180.46 | 0.631 | 8.54 | -0.66 | 0.635 | 1.33 | -0.696 | -4.25 | -0.292 | 2.22 | 19.65 | 1449 | -- | -- |
| 200.46 | 0.659 | 8.41 | 0.211 | 0.665 | 1.53 | -0.903 | -- | -0.0433 | 2.32 | 12.56 | 6281 | -- | -- |
| 180.87 | 0.626 | 8.52 | -0.514 | 0.527 | 1.44 | -- | -4.08 | -0.238 | 2.39 | 19.06 | 1194 | -- | -- |
| 198.59 | 0.656 | 8.41 | 0.489 | 0.567 | 1.32 | -- | -- | -0.024 | 2.55 | 17.75 | 1185 | -- | -- |
| 194.77 | 0.65 | 8.53 | -0.575 | -- | 1.63 | -- | -4.34 | -0.285 | -- | 18.84 | 1130 | -- | -- |
| 235.44 | 0.719 | 8.33 | 1.01 | 0.698 | -- | -0.801 | -- | 0.319 | 2.22 | -- | -- | -- | -- |
| 237.83 | 0.722 | 8.32 | 1.03 | 0.696 | -- | -- | -- | 0.324 | 2.18 | -- | -- | -- | -- |
| 210.03 | 0.675 | 8.39 | 0.515 | -- | 1.85 | -- | -- | 0.0204 | -- | 13.9 | 1099 | -- | -- |
| 203.66 | 0.665 | 8.4 | -- | 0.472 | 1.86 | -- | -- | -0.0285 | 2.71 | 14.4 | 1143 | -- | -- |
| 266.73 | 0.763 | 8.32 | 1.06 | -- | -- | -- | -- | 0.341 | -- | -- | -- | -- | -- |
| 266.04 | 0.763 | 8.35 | -- | 0.716 | -- | -- | -- | 0.209 | 2.21 | -- | -- | -- | -- |
| 216.23 | 0.685 | 8.41 | -- | -- | 2.05 | -- | -- | -0.0676 | -- | 13.37 | 1113 | -- | -- |
| 296.59 | 0.804 | 8.34 | -- | -- | -- | -- | -- | 0.223 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 174.34 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 4 |
| 2 | 174.44 | temperature | 20 | 1440 | > th | dose dependent | rect. | 19 | 2 |
| 7 | 174.68 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 7 |
| 9 | 174.77 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 12 |
| 32 | 175.65 | temperature | 20 | 1440 | > th | dose dependent | sin | 13 | NA |
| 52 | 176.30 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 56 | 176.52 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 80 | 177.20 | temperature | 20 | 720 | > th | dose dependent | sin | 8 | NA |
| 138 | 178.71 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 154 | 179.07 | temperature | 25 | 4320 | > th | dose independent | rect. | 12 | 1 |
| 159 | 179.16 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 3 |
| 198 | 179.83 | radiation | 1 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 201 | 179.87 | radiation | 1 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 202 | 179.87 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 3 |
| 220 | 180.06 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 252 | 180.42 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 19 |
| 258 | 180.47 | radiation | 1 | 14400 | < th | dose independent | rect. | 23 | 8 |
| 272 | 180.52 | radiation | 1 | 14400 | < th | dose independent | rect. | 3 | 4 |
| 274 | 180.53 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 298 | 180.60 | humidity | 90 | 14400 | > th | dose dependent | rect. | 18 | 9 |
| 314 | 180.71 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 23 |
| 329 | 180.78 | temperature | 25 | 4320 | < th | dose independent | rect. | 12 | 1 |
| 335 | 180.79 | humidity | 90 | 14400 | > th | dose dependent | rect. | 15 | 13 |
| 381 | 180.97 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 13 |
| 414 | 181.09 | humidity | 90 | 14400 | > th | dose dependent | sin | 14 | NA |
| 478 | 181.29 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 494 | 181.33 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 3 |
| 622 | 181.75 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 694 | 181.96 | temperature | 30 | 1440 | < th | dose dependent | sin | 13 | NA |
| 840 | 182.34 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 890 | 182.44 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |