BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0971500 Os01g0971500|AK120840
(135 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G32720.1 | chr2:13877013-13878447 REVERSE LENGTH=135 228 9e-61
AT5G53560.1 | chr5:21759628-21760353 FORWARD LENGTH=135 201 7e-53
AT5G48810.1 | chr5:19789249-19790180 REVERSE LENGTH=141 188 7e-49
AT1G26340.1 | chr1:9113992-9114755 FORWARD LENGTH=136 121 1e-28
AT2G46650.1 | chr2:19151807-19152394 FORWARD LENGTH=133 112 7e-26
AT1G37130.1 | chr1:14158617-14161652 FORWARD LENGTH=918 82 6e-17
AT1G77760.1 | chr1:29236005-29239367 REVERSE LENGTH=918 79 8e-16
AT1G60660.1 | chr1:22342589-22342954 REVERSE LENGTH=122 70 3e-13
AT3G61580.1 | chr3:22786253-22787602 FORWARD LENGTH=450 65 7e-12
AT5G09680.1 | chr5:2999362-3000185 REVERSE LENGTH=212 61 2e-10
AT2G46210.1 | chr2:18977542-18978891 FORWARD LENGTH=450 56 6e-09
>AT2G32720.1 | chr2:13877013-13878447 REVERSE LENGTH=135
Length = 134
Score = 228 bits (580), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 105/128 (82%), Positives = 115/128 (89%)
Query: 5 KVLTLEEVSKHNTKDDCWLIIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDVGHS 64
K+ TL EVS+HN DCW++I GKVYNVTKFLEDHPGGDDVLLSST KDATDDFEDVGHS
Sbjct: 6 KIFTLSEVSEHNQAHDCWIVINGKVYNVTKFLEDHPGGDDVLLSSTGKDATDDFEDVGHS 65
Query: 65 TTARAMMDEYYVGDIDATTIPTKVKYTPPKQPHYNQDKTPEFIIKILQFLVPLAILGLAV 124
+AR MM++YYVG+ID TTIP KVKYTPPKQPHYNQDKT EFIIK+LQFLVPLAILGLAV
Sbjct: 66 ESAREMMEQYYVGEIDPTTIPKKVKYTPPKQPHYNQDKTSEFIIKLLQFLVPLAILGLAV 125
Query: 125 AVRIYTKS 132
+RIYTKS
Sbjct: 126 GIRIYTKS 133
>AT5G53560.1 | chr5:21759628-21760353 FORWARD LENGTH=135
Length = 134
Score = 201 bits (512), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 92/132 (69%), Positives = 111/132 (84%)
Query: 2 SNNKVLTLEEVSKHNTKDDCWLIIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDV 61
S+ KVL+ EEVSKHN DCWLII GKVY+VT F++DHPGGD+VLLSST KDAT+DFEDV
Sbjct: 3 SDRKVLSFEEVSKHNKTKDCWLIISGKVYDVTPFMDDHPGGDEVLLSSTGKDATNDFEDV 62
Query: 62 GHSTTARAMMDEYYVGDIDATTIPTKVKYTPPKQPHYNQDKTPEFIIKILQFLVPLAILG 121
GHS TAR MMD+Y++G+ID++++P Y P+QP YNQDKTPEFIIKILQFLVP+ ILG
Sbjct: 63 GHSDTARDMMDKYFIGEIDSSSVPATRTYVAPQQPAYNQDKTPEFIIKILQFLVPILILG 122
Query: 122 LAVAVRIYTKSE 133
LA+ VR YTK +
Sbjct: 123 LALVVRHYTKKD 134
>AT5G48810.1 | chr5:19789249-19790180 REVERSE LENGTH=141
Length = 140
Score = 188 bits (478), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 85/134 (63%), Positives = 109/134 (81%), Gaps = 2/134 (1%)
Query: 3 NNKVLTLEEVSKHNTKDDCWLIIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDVG 62
+ KV TL EVS+H++ DCW++I GKVY+VTKFL+DHPGGD+V+L+ST KDATDDFEDVG
Sbjct: 4 DGKVFTLSEVSQHSSAKDCWIVIDGKVYDVTKFLDDHPGGDEVILTSTGKDATDDFEDVG 63
Query: 63 HSTTARAMMDEYYVGDIDATTIPTKVKYTPPKQPH--YNQDKTPEFIIKILQFLVPLAIL 120
HS+TA+AM+DEYYVGDID T+P K K+ PP QDK+ +F+IK+LQFLVPL IL
Sbjct: 64 HSSTAKAMLDEYYVGDIDTATVPVKAKFVPPTSTKAVATQDKSSDFVIKLLQFLVPLLIL 123
Query: 121 GLAVAVRIYTKSES 134
GLA +R YTK+++
Sbjct: 124 GLAFGIRYYTKTKA 137
>AT1G26340.1 | chr1:9113992-9114755 FORWARD LENGTH=136
Length = 135
Score = 121 bits (303), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 91/130 (70%), Gaps = 10/130 (7%)
Query: 4 NKVLTLEEVSKHNTKDDCWLIIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDVGH 63
K+ ++EE + HN +DDCW++I GKVY+V+ ++++HPGGDDVLL+ KDATDDFED GH
Sbjct: 5 TKLYSMEEAATHNKQDDCWVVIDGKVYDVSSYMDEHPGGDDVLLAVAGKDATDDFEDAGH 64
Query: 64 STTARAMMDEYYVGDIDATTIPTKVKYTPPKQPHYNQDKTPEFIIKILQ-----FLVPLA 118
S AR +M++Y++G++D +++P P+ Y +D+ + + K+ ++VP++
Sbjct: 65 SKDARELMEKYFIGELDESSLP-----EIPELKIYKKDQPQDSVQKLFDLTKQYWVVPVS 119
Query: 119 ILGLAVAVRI 128
I+ ++VAV +
Sbjct: 120 IITISVAVSV 129
>AT2G46650.1 | chr2:19151807-19152394 FORWARD LENGTH=133
Length = 132
Score = 112 bits (279), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 92/132 (69%), Gaps = 4/132 (3%)
Query: 1 MSNNKVLTLEEVSKHNTKDDCWLIIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFED 60
M+N +++ +V+KH K+DCW++I GKVY+++ F+++HPGGD+VLL+ T KDA+ DFED
Sbjct: 1 MAN--LISFHDVAKHKCKNDCWILIHGKVYDISTFMDEHPGGDNVLLAVTGKDASIDFED 58
Query: 61 VGHSTTARAMMDEYYVGDIDATTIPTKVKYTPPKQPHYNQDKT--PEFIIKILQFLVPLA 118
V HS A+ +M +Y +GD+D +T+P +Y PP + +T E K+L +L+PL
Sbjct: 59 VNHSKDAKELMKKYCIGDVDQSTVPVTQQYIPPWEKESTAAETTKEESGKKLLIYLIPLL 118
Query: 119 ILGLAVAVRIYT 130
ILG+A A+R Y
Sbjct: 119 ILGVAFALRFYN 130
>AT1G37130.1 | chr1:14158617-14161652 FORWARD LENGTH=918
Length = 917
Score = 82.4 bits (202), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 5 KVLTLEEVSKHNTKDDCWLIIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDVGHS 64
K+ ++ EV KHN+ D CW+I+ G +Y+ T+FL DHPGG D +L + D T++FE + HS
Sbjct: 543 KMYSMSEVKKHNSADSCWIIVHGHIYDCTRFLMDHPGGSDSILINAGTDCTEEFEAI-HS 601
Query: 65 TTARAMMDEYYVGDIDAT 82
A+ M+++Y +G++ T
Sbjct: 602 DKAKKMLEDYRIGELITT 619
>AT1G77760.1 | chr1:29236005-29239367 REVERSE LENGTH=918
Length = 917
Score = 79.0 bits (193), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Query: 4 NKVLTLEEVSKHNTKDDCWLIIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDVGH 63
+K+ ++ EV KHNT D W+I+ G +Y+ T+FL+DHPGG D +L + D T++FE + H
Sbjct: 545 SKMYSISEVRKHNTADSAWIIVHGHIYDCTRFLKDHPGGTDSILINAGTDCTEEFEAI-H 603
Query: 64 STTARAMMDEYYVGDIDAT 82
S A+ ++++Y +G++ T
Sbjct: 604 SDKAKKLLEDYRIGELITT 622
>AT1G60660.1 | chr1:22342589-22342954 REVERSE LENGTH=122
Length = 121
Score = 70.1 bits (170), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 5 KVLTLEEVSKHNTKDDCWLIIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDVGHS 64
K + EV+ HN ++DCW+II KVY++T ++E+HPGG D +L D+TD F H+
Sbjct: 47 KSYSKSEVAVHNKRNDCWIIIKDKVYDITSYVEEHPGG-DAILDHAGDDSTDGFFGPQHA 105
Query: 65 TTARAMMDEYYVGDI 79
T M++++Y+G++
Sbjct: 106 TRVFDMIEDFYIGEL 120
>AT3G61580.1 | chr3:22786253-22787602 FORWARD LENGTH=450
Length = 449
Score = 65.5 bits (158), Expect = 7e-12, Method: Composition-based stats.
Identities = 31/76 (40%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 2 SNNKVLTLEEVSKHNTKDDCWLIIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDV 61
+ K +T E++ KHN D W+ I GKVYNV+ +++ HPGGD V+L+ +D TD F
Sbjct: 5 TEKKYITNEDLKKHNKSGDLWIAIQGKVYNVSDWIKTHPGGDTVILNLVGQDVTDAFIAF 64
Query: 62 GHSTTARAMMDEYYVG 77
H TA +D + G
Sbjct: 65 -HPGTAWHHLDHLFTG 79
>AT5G09680.1 | chr5:2999362-3000185 REVERSE LENGTH=212
Length = 211
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 48/83 (57%)
Query: 2 SNNKVLTLEEVSKHNTKDDCWLIIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFEDV 61
SN +++ ++EV KH T D W ++ G+VYN++ ++ HPGG D+L+ + +D T F
Sbjct: 124 SNKRLIPMDEVKKHRTGDSMWTVLKGRVYNISPYMNFHPGGVDMLMKAVGRDGTLLFNKY 183
Query: 62 GHSTTARAMMDEYYVGDIDATTI 84
++++ VG +D T +
Sbjct: 184 HAWVNVDILLEKCLVGVLDDTKV 206
>AT2G46210.1 | chr2:18977542-18978891 FORWARD LENGTH=450
Length = 449
Score = 55.8 bits (133), Expect = 6e-09, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 37/57 (64%)
Query: 2 SNNKVLTLEEVSKHNTKDDCWLIIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDF 58
+ + +T E++ KHN D W+ I GKVY+V+ +++ HPGG+ +L+ +D TD F
Sbjct: 5 TKKRYVTSEDLKKHNKPGDLWISIQGKVYDVSDWVKSHPGGEAAILNLAGQDVTDAF 61
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.315 0.134 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,125,260
Number of extensions: 130509
Number of successful extensions: 319
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 314
Number of HSP's successfully gapped: 11
Length of query: 135
Length of database: 11,106,569
Length adjustment: 88
Effective length of query: 47
Effective length of database: 8,693,961
Effective search space: 408616167
Effective search space used: 408616167
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 106 (45.4 bits)