Os01g0962300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Vacuolar ATP synthase 16 kDa proteolipid subunit (EC 3.6.3.14) (V- ATPase 16 kDa proteolipid subunit) (Fragment).
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Os01g0962300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Vacuolar ATP synthase 16 kDa proteolipid subunit (EC 3.6.3.14) (V- ATPase 16 kDa proteolipid subunit) (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 42.6 | 0.307 | 11.5 | -0.124 | 0.726 | -0.85 | 0.683 | -0.559 | 0.21 | 6.77 | 21.36 | 1321 | -- | -- |
| 43.31 | 0.307 | 11.5 | -0.0349 | 0.717 | -0.765 | 0.663 | -- | 0.227 | 6.69 | 21.4 | 1210 | -- | -- |
| 43.75 | 0.308 | 11.5 | -0.113 | 0.724 | -0.84 | -- | -0.524 | 0.208 | 6.57 | 21.39 | 1240 | -- | -- |
| 44.35 | 0.31 | 11.5 | 0.0142 | 0.719 | -0.797 | -- | -- | 0.237 | 6.54 | 21.3 | 1210 | -- | -- |
| 65.77 | 0.378 | 11.5 | -0.0885 | -- | -0.826 | -- | -0.443 | 0.22 | -- | 21.3 | 724 | -- | -- |
| 61.92 | 0.369 | 11.5 | -0.318 | 0.715 | -- | 0.737 | -- | 0.0162 | 7 | -- | -- | -- | -- |
| 63.32 | 0.373 | 11.5 | -0.304 | 0.718 | -- | -- | -- | 0.0141 | 6.92 | -- | -- | -- | -- |
| 66.45 | 0.38 | 11.5 | -0.0151 | -- | -0.801 | -- | -- | 0.249 | -- | 21.38 | 697 | -- | -- |
| 44.36 | 0.31 | 11.5 | -- | 0.72 | -0.793 | -- | -- | 0.235 | 6.54 | 21.3 | 1210 | -- | -- |
| 90.36 | 0.444 | 11.6 | -0.289 | -- | -- | -- | -- | 0.0276 | -- | -- | -- | -- | -- |
| 65.76 | 0.379 | 11.5 | -- | 0.714 | -- | -- | -- | 0.048 | 6.94 | -- | -- | -- | -- |
| 59.64 | 0.36 | 11.5 | -- | -- | -0.715 | -- | -- | 0.229 | -- | 26.4 | 387 | -- | -- |
| 92.57 | 0.449 | 11.5 | -- | -- | -- | -- | -- | 0.0597 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 40.58 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 14 |
| 3 | 40.83 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 4 | 40.87 | temperature | 15 | 720 | > th | dose dependent | sin | 5 | NA |
| 18 | 41.29 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 12 |
| 35 | 41.60 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 10 |
| 46 | 41.75 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 58 | 41.90 | temperature | 15 | 720 | > th | dose dependent | rect. | 3 | 8 |
| 67 | 41.98 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 77 | 42.04 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 109 | 42.24 | temperature | 30 | 1440 | < th | dose dependent | rect. | 24 | 9 |
| 110 | 42.24 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 116 | 42.29 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 117 | 42.29 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 119 | 42.30 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 6 |
| 122 | 42.31 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 6 |
| 177 | 42.43 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 12 |
| 269 | 42.58 | temperature | 30 | 720 | < th | dose dependent | sin | 5 | NA |
| 285 | 42.61 | temperature | 25 | 1440 | < th | dose dependent | sin | 9 | NA |
| 321 | 42.67 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 373 | 42.77 | temperature | 15 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 390 | 42.80 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 538 | 43.08 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 562 | 43.10 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 881 | 43.62 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 18 |
| 917 | 43.68 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 934 | 43.71 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 971 | 43.78 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 972 | 43.78 | temperature | 20 | 270 | > th | dose dependent | rect. | 6 | 16 |