Os01g0962200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0962200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 36.03 | 0.282 | 11.1 | -0.322 | 0.82 | -0.733 | 0.417 | -0.237 | 0.182 | 0.028 | 22.6 | 8 | -- | -- |
| 36.04 | 0.282 | 11.1 | -0.348 | 0.818 | -0.686 | 0.359 | -- | 0.175 | 0.0133 | 22.81 | 7 | -- | -- |
| 36.57 | 0.284 | 11.1 | -0.381 | 0.815 | -0.658 | -- | 0.17 | 0.169 | 0.00719 | 22.93 | 6 | -- | -- |
| 36.58 | 0.284 | 11.1 | -0.362 | 0.817 | -0.697 | -- | -- | 0.175 | 0.0136 | 22.7 | 7 | -- | -- |
| 73.16 | 0.401 | 11.1 | -0.266 | -- | -0.461 | -- | 0.437 | 0.251 | -- | 18.21 | 11 | -- | -- |
| 41.64 | 0.302 | 11.1 | -0.212 | 0.72 | -- | 0.382 | -- | 0.261 | 23.9 | -- | -- | -- | -- |
| 42.27 | 0.304 | 11.1 | -0.227 | 0.719 | -- | -- | -- | 0.26 | 23.9 | -- | -- | -- | -- |
| 66.75 | 0.381 | 11.1 | -0.481 | -- | -0.713 | -- | -- | 0.138 | -- | 28.7 | 870 | -- | -- |
| 39.77 | 0.295 | 11.1 | -- | 0.792 | -0.552 | -- | -- | 0.23 | 24 | 22.7 | 7 | -- | -- |
| 74.81 | 0.404 | 11.1 | -0.205 | -- | -- | -- | -- | 0.269 | -- | -- | -- | -- | -- |
| 43.63 | 0.309 | 11.1 | -- | 0.716 | -- | -- | -- | 0.285 | 23.9 | -- | -- | -- | -- |
| 70.43 | 0.391 | 11.1 | -- | -- | -0.544 | -- | -- | 0.196 | -- | 29 | 856 | -- | -- |
| 75.92 | 0.407 | 11.1 | -- | -- | -- | -- | -- | 0.292 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 34.43 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 6 |
| 3 | 34.87 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 5 | 34.98 | wind | 1.0 | 43200 | > th | dose independent | rect. | 3 | 5 |
| 7 | 35.11 | wind | 1.0 | 43200 | < th | dose independent | rect. | 2 | 6 |
| 12 | 35.24 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 13 | 35.28 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 19 | 10 |
| 21 | 35.35 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 19 | 14 |
| 29 | 35.39 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 11 | NA |
| 47 | 35.44 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 2 | 8 |
| 59 | 35.48 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 64 | 35.49 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 3 |
| 75 | 35.51 | wind | 1.0 | 43200 | > th | dose independent | rect. | 22 | 10 |
| 81 | 35.53 | wind | 1.0 | 43200 | < th | dose independent | rect. | 23 | 9 |
| 94 | 35.56 | wind | 1.0 | 43200 | < th | dose independent | rect. | 2 | 3 |
| 96 | 35.56 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 2 |
| 147 | 35.70 | wind | 1.0 | 43200 | < th | dose independent | rect. | 18 | 14 |
| 149 | 35.70 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 12 | 2 |
| 159 | 35.72 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 182 | 35.78 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 19 | 9 |
| 198 | 35.80 | wind | 1.0 | 43200 | > th | dose independent | rect. | 18 | 14 |
| 216 | 35.84 | wind | 5.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 235 | 35.87 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 24 | 21 |
| 240 | 35.88 | temperature | 20.0 | 10 | > th | dose independent | rect. | 9 | 20 |
| 257 | 35.91 | temperature | 20.0 | 90 | > th | dose independent | rect. | 7 | 22 |
| 261 | 35.92 | wind | 5.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 262 | 35.92 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 281 | 35.94 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 23 |
| 291 | 35.96 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 19 | 13 |
| 292 | 35.96 | temperature | 20.0 | 10 | > th | dose independent | rect. | 7 | 22 |
| 312 | 35.99 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 317 | 36.00 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 320 | 36.00 | humidity | 90.0 | 14400 | > th | dose dependent | no | NA | NA |
| 372 | 36.06 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 379 | 36.08 | temperature | 25.0 | 30 | < th | dose dependent | sin | 14 | NA |
| 391 | 36.10 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 394 | 36.11 | temperature | 20.0 | 10 | > th | dose independent | rect. | 18 | 11 |
| 414 | 36.14 | humidity | 90.0 | 14400 | > th | dose independent | sin | 10 | NA |
| 416 | 36.14 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 2 | 8 |
| 434 | 36.17 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 17 | 14 |
| 447 | 36.19 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 455 | 36.19 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 1 | 5 |
| 476 | 36.21 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 7 |
| 499 | 36.24 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 12 |
| 500 | 36.24 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 12 |
| 504 | 36.24 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 5 |
| 507 | 36.24 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 12 |
| 520 | 36.26 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 17 | 12 |
| 541 | 36.29 | temperature | 20.0 | 90 | > th | dose independent | rect. | 17 | 11 |
| 543 | 36.29 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 556 | 36.30 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 7 |
| 577 | 36.34 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 20 | 5 |
| 620 | 36.38 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 627 | 36.39 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 633 | 36.39 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 636 | 36.39 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 641 | 36.40 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 646 | 36.40 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 660 | 36.41 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 670 | 36.42 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 7 |
| 677 | 36.42 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 687 | 36.43 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 706 | 36.44 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 17 | 10 |
| 709 | 36.45 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 731 | 36.46 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 11 |
| 735 | 36.47 | temperature | 20.0 | 30 | > th | dose independent | rect. | 20 | 9 |
| 760 | 36.49 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 9 | 7 |
| 770 | 36.49 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 3 |
| 772 | 36.49 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 777 | 36.49 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 782 | 36.50 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 792 | 36.50 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 12 | 18 |
| 797 | 36.51 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 6 |
| 808 | 36.51 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 6 |
| 811 | 36.51 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 23 | 9 |
| 816 | 36.52 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 836 | 36.52 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 17 | 12 |
| 841 | 36.53 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 850 | 36.53 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 6 |
| 864 | 36.54 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 7 | 7 |
| 892 | 36.55 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 7 | 7 |
| 899 | 36.55 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 12 | 16 |
| 919 | 36.57 | wind | 5.0 | 14400 | < th | dose independent | rect. | 14 | 3 |
| 989 | 36.60 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 15 | 2 |
| 990 | 36.60 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 18 | 2 |