Os01g0938600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0938600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 63.54 | 0.375 | 7.83 | -0.446 | 1.13 | -1.53 | 0.486 | -0.856 | -0.0499 | 2.72 | 18.6 | 7770 | -- | -- |
| 63.88 | 0.372 | 7.85 | -0.425 | 1.13 | -1.23 | 0.543 | -- | -0.0455 | 2.68 | 18.5 | 7907 | -- | -- |
| 64.32 | 0.374 | 7.82 | -0.449 | 1.13 | -1.53 | -- | -0.873 | -0.0522 | 2.73 | 18.6 | 7906 | -- | -- |
| 64.73 | 0.375 | 7.86 | -0.46 | 1.13 | -1.23 | -- | -- | -0.0544 | 2.71 | 18.6 | 7832 | -- | -- |
| 138.01 | 0.547 | 7.81 | -0.493 | -- | -1.84 | -- | -1.41 | -0.0479 | -- | 18.69 | 8124 | -- | -- |
| 81.04 | 0.422 | 7.79 | 0.335 | 1.15 | -- | 0.485 | -- | 0.221 | 2.68 | -- | -- | -- | -- |
| 81.87 | 0.424 | 7.8 | 0.323 | 1.15 | -- | -- | -- | 0.218 | 2.67 | -- | -- | -- | -- |
| 138.89 | 0.549 | 7.86 | -0.479 | -- | -1.34 | -- | -- | -0.0549 | -- | 18.7 | 8120 | -- | -- |
| 67.49 | 0.383 | 7.84 | -- | 1.12 | -0.894 | -- | -- | 0.0539 | 2.62 | 18.51 | 6435 | -- | -- |
| 159.05 | 0.589 | 7.79 | 0.372 | -- | -- | -- | -- | 0.247 | -- | -- | -- | -- | -- |
| 84.61 | 0.43 | 7.8 | -- | 1.16 | -- | -- | -- | 0.182 | 2.67 | -- | -- | -- | -- |
| 141.66 | 0.554 | 7.83 | -- | -- | -0.966 | -- | -- | 0.0524 | -- | 18.72 | 6839 | -- | -- |
| 162.7 | 0.595 | 7.8 | -- | -- | -- | -- | -- | 0.206 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 62.14 | wind | 9 | 43200 | > th | dose independent | rect. | 8 | 10 |
| 3 | 62.23 | wind | 9 | 43200 | < th | dose independent | rect. | 8 | 10 |
| 5 | 62.25 | humidity | 80 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 9 | 62.35 | wind | 9 | 43200 | > th | dose independent | rect. | 9 | 6 |
| 11 | 62.36 | wind | 9 | 43200 | > th | dose independent | sin | 23 | NA |
| 17 | 62.45 | wind | 9 | 43200 | < th | dose independent | sin | 23 | NA |
| 32 | 62.58 | wind | 9 | 43200 | < th | dose independent | rect. | 9 | 5 |
| 88 | 62.86 | wind | 9 | 43200 | > th | dose independent | rect. | 9 | 18 |
| 92 | 62.87 | wind | 9 | 43200 | > th | dose independent | rect. | 9 | 22 |
| 124 | 62.95 | humidity | 80 | 14400 | > th | dose dependent | rect. | 2 | 5 |
| 146 | 63.03 | wind | 9 | 43200 | < th | dose independent | rect. | 9 | 22 |
| 161 | 63.06 | wind | 9 | 43200 | < th | dose independent | rect. | 21 | 21 |
| 173 | 63.08 | wind | 9 | 43200 | > th | dose dependent | rect. | 11 | 21 |
| 186 | 63.11 | wind | 9 | 43200 | > th | dose independent | rect. | 21 | 21 |
| 198 | 63.14 | humidity | 50 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 211 | 63.16 | wind | 9 | 43200 | > th | dose dependent | rect. | 10 | 7 |
| 221 | 63.18 | wind | 9 | 43200 | > th | dose dependent | rect. | 10 | 10 |
| 233 | 63.20 | wind | 7 | 43200 | > th | dose dependent | rect. | 10 | 4 |
| 237 | 63.21 | wind | 7 | 43200 | > th | dose dependent | rect. | 8 | 9 |
| 282 | 63.30 | humidity | 50 | 43200 | > th | dose independent | rect. | 20 | 19 |
| 290 | 63.34 | humidity | 50 | 43200 | < th | dose independent | rect. | 20 | 19 |
| 314 | 63.39 | humidity | 50 | 43200 | > th | dose independent | rect. | 4 | 11 |
| 315 | 63.39 | humidity | 50 | 43200 | < th | dose independent | rect. | 4 | 11 |
| 320 | 63.39 | wind | 7 | 43200 | > th | dose dependent | sin | 23 | NA |
| 347 | 63.41 | humidity | 50 | 43200 | < th | dose independent | rect. | 17 | 22 |
| 354 | 63.42 | wind | 9 | 43200 | < th | dose independent | no | NA | NA |
| 370 | 63.44 | wind | 9 | 43200 | > th | dose independent | no | NA | NA |
| 374 | 63.45 | humidity | 50 | 43200 | > th | dose independent | sin | 6 | NA |
| 375 | 63.45 | temperature | 20 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 385 | 63.46 | temperature | 20 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 393 | 63.47 | humidity | 50 | 43200 | < th | dose independent | sin | 5 | NA |
| 407 | 63.48 | humidity | 50 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 485 | 63.54 | humidity | 50 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 490 | 63.55 | humidity | 50 | 43200 | < th | dose independent | rect. | 10 | 5 |
| 501 | 63.56 | humidity | 50 | 43200 | < th | dose dependent | rect. | 5 | 10 |
| 503 | 63.56 | humidity | 50 | 43200 | < th | dose dependent | rect. | 20 | 19 |
| 515 | 63.58 | humidity | 50 | 43200 | > th | dose independent | rect. | 13 | 2 |
| 522 | 63.58 | humidity | 50 | 43200 | < th | dose dependent | rect. | 10 | 5 |
| 526 | 63.59 | radiation | 40 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 536 | 63.60 | humidity | 50 | 43200 | > th | dose independent | rect. | 10 | 5 |
| 557 | 63.62 | humidity | 50 | 43200 | < th | dose independent | rect. | 11 | 22 |
| 561 | 63.62 | wind | 9 | 43200 | > th | dose dependent | rect. | 10 | 12 |
| 573 | 63.63 | humidity | 50 | 43200 | < th | dose dependent | sin | 3 | NA |
| 589 | 63.63 | humidity | 50 | 43200 | < th | dose dependent | rect. | 16 | 23 |
| 615 | 63.65 | humidity | 60 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 628 | 63.66 | humidity | 50 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 670 | 63.68 | humidity | 50 | 43200 | > th | dose independent | rect. | 10 | 23 |
| 674 | 63.68 | humidity | 50 | 43200 | < th | dose dependent | rect. | 10 | 8 |
| 677 | 63.68 | humidity | 50 | 43200 | < th | dose dependent | rect. | 10 | 23 |
| 678 | 63.69 | humidity | 50 | 43200 | < th | dose independent | rect. | 13 | 2 |
| 686 | 63.69 | wind | 9 | 43200 | > th | dose dependent | sin | 17 | NA |
| 695 | 63.69 | humidity | 50 | 43200 | < th | dose dependent | rect. | 13 | 23 |
| 727 | 63.71 | humidity | 50 | 43200 | < th | dose independent | rect. | 4 | 18 |
| 741 | 63.71 | humidity | 50 | 43200 | < th | dose dependent | rect. | 4 | 18 |
| 748 | 63.72 | humidity | 50 | 43200 | < th | dose independent | no | NA | NA |
| 771 | 63.72 | humidity | 50 | 43200 | < th | dose dependent | no | NA | NA |
| 808 | 63.73 | radiation | 40 | 43200 | < th | dose independent | rect. | 10 | 2 |
| 837 | 63.73 | humidity | 60 | 43200 | < th | dose dependent | rect. | 20 | 14 |
| 858 | 63.74 | wind | 9 | 43200 | < th | dose independent | rect. | 10 | 3 |
| 872 | 63.74 | humidity | 60 | 43200 | < th | dose dependent | rect. | 7 | 3 |
| 894 | 63.75 | humidity | 50 | 43200 | > th | dose independent | rect. | 4 | 18 |
| 929 | 63.76 | humidity | 50 | 43200 | > th | dose independent | no | NA | NA |