Os01g0934300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Flowering-time protein isoform beta.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0934300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Flowering-time protein isoform beta.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29.7 | 0.256 | 9.92 | 0.523 | 0.539 | 0.411 | -0.629 | -1.09 | 0.0418 | 7.82 | 26.15 | 14 | -- | -- |
| 31.68 | 0.262 | 9.93 | 0.426 | 0.524 | 0.546 | -0.429 | -- | 0.0361 | 7.87 | 25.7 | 65 | -- | -- |
| 30.49 | 0.257 | 9.92 | 0.515 | 0.516 | 0.427 | -- | -1.08 | 0.0446 | 7.74 | 26.1 | 131 | -- | -- |
| 32.21 | 0.264 | 9.94 | 0.344 | 0.524 | 0.502 | -- | -- | 0.00958 | 7.87 | 25.66 | 88 | -- | -- |
| 41.55 | 0.3 | 9.91 | 0.692 | -- | 0.631 | -- | -1.62 | 0.12 | -- | 29.6 | 478 | -- | -- |
| 34.92 | 0.277 | 9.96 | 0.233 | 0.548 | -- | -0.602 | -- | -0.1 | 7 | -- | -- | -- | -- |
| 35.84 | 0.28 | 9.96 | 0.222 | 0.546 | -- | -- | -- | -0.0985 | 7.13 | -- | -- | -- | -- |
| 44.19 | 0.31 | 9.94 | 0.398 | -- | 0.655 | -- | -- | 0.0494 | -- | 28.3 | 424 | -- | -- |
| 35.02 | 0.276 | 9.94 | -- | 0.544 | 0.374 | -- | -- | -0.05 | 7.62 | 25.64 | 54 | -- | -- |
| 51.57 | 0.336 | 9.97 | 0.232 | -- | -- | -- | -- | -0.0888 | -- | -- | -- | -- | -- |
| 37.14 | 0.285 | 9.97 | -- | 0.548 | -- | -- | -- | -0.123 | 7.1 | -- | -- | -- | -- |
| 47.98 | 0.323 | 9.96 | -- | -- | 0.512 | -- | -- | -0.0213 | -- | 28.37 | 407 | -- | -- |
| 53 | 0.34 | 9.98 | -- | -- | -- | -- | -- | -0.115 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 27.84 | temperature | 25.0 | 90 | > th | dose independent | rect. | 17 | 15 |
| 3 | 28.23 | temperature | 25.0 | 270 | > th | dose independent | rect. | 15 | 17 |
| 7 | 28.65 | humidity | 50.0 | 43200 | > th | dose dependent | rect. | 8 | 2 |
| 8 | 28.69 | temperature | 25.0 | 90 | > th | dose independent | sin | 11 | NA |
| 10 | 28.70 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 12 | 28.75 | humidity | 50.0 | 43200 | > th | dose dependent | rect. | 8 | 4 |
| 24 | 28.85 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 8 | 4 |
| 35 | 28.89 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 36 | 28.89 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 37 | 28.89 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 44 | 28.91 | temperature | 25.0 | 270 | < th | dose independent | rect. | 11 | 19 |
| 45 | 28.92 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 52 | 28.94 | radiation | 10.0 | 14400 | > th | dose dependent | rect. | 17 | 14 |
| 55 | 28.96 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 59 | 28.98 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 60 | 28.98 | humidity | 50.0 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 61 | 28.98 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 72 | 29.01 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 8 | 7 |
| 76 | 29.01 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 18 | 14 |
| 84 | 29.04 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 90 | 29.06 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 9 | 6 |
| 140 | 29.15 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 5 | 10 |
| 155 | 29.17 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 163 | 29.17 | humidity | 50.0 | 43200 | > th | dose dependent | sin | 1 | NA |
| 177 | 29.19 | temperature | 20.0 | 90 | > th | dose dependent | sin | 10 | NA |
| 185 | 29.20 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 12 | 2 |
| 211 | 29.22 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 11 | 21 |
| 212 | 29.23 | humidity | 70.0 | 43200 | > th | dose independent | sin | 1 | NA |
| 248 | 29.26 | humidity | 50.0 | 14400 | > th | dose independent | sin | 11 | NA |
| 256 | 29.26 | radiation | 10.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 262 | 29.27 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 6 | 4 |
| 301 | 29.28 | humidity | 70.0 | 43200 | < th | dose independent | sin | 1 | NA |
| 322 | 29.29 | wind | 1.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 341 | 29.30 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 359 | 29.30 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 17 | 16 |
| 366 | 29.31 | radiation | 30.0 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 436 | 29.35 | humidity | 90.0 | 43200 | < th | dose dependent | sin | 0 | NA |
| 449 | 29.36 | radiation | 10.0 | 43200 | > th | dose independent | sin | 9 | NA |
| 450 | 29.36 | wind | 1.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 505 | 29.39 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 7 | 2 |
| 510 | 29.39 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 19 | 13 |
| 531 | 29.40 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 570 | 29.41 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 14 | 19 |
| 656 | 29.43 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 691 | 29.44 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 815 | 29.48 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 945 | 29.51 | atmosphere | 1005.0 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 970 | 29.52 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 989 | 29.52 | humidity | 60.0 | 14400 | < th | dose dependent | sin | 11 | NA |
| 993 | 29.52 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 9 | 5 |