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Os01g0934000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : WD40-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.7 (0.016) R2 : 0.0107
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.075 (0.0337) R2dN8 : 0.0139 R2N8 : 0.0107
σ : 0.302
deviance : 41.76
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
21.44 0.218 11.7 0.488 0.388 0.224 -0.0355 1.05 0.163 4.14 60 4211 -- --
22.87 0.223 11.7 0.548 0.431 0.294 -0.019 -- 0.177 4.14 62.8 4854 -- --
21.44 0.216 11.7 0.488 0.388 0.224 -- 1.05 0.164 4.16 59.97 4210 -- --
22.87 0.223 11.7 0.558 0.425 0.314 -- -- 0.184 4.15 62.59 4855 -- --
29.57 0.253 11.7 0.501 -- 0.273 -- 1.07 0.185 -- 59.66 4172 -- --
24.63 0.233 11.7 0.548 0.4 -- -0.000905 -- 0.127 4.06 -- -- -- --
24.63 0.232 11.7 0.548 0.4 -- -- -- 0.127 4.06 -- -- -- --
30.9 0.259 11.7 0.565 -- 0.356 -- -- 0.24 -- 64 4078 -- --
30.29 0.256 11.7 -- 0.392 0.378 -- -- 0.146 4.24 59 3938 -- --
33.35 0.27 11.7 0.565 -- -- -- -- 0.138 -- -- -- -- --
32.56 0.267 11.7 -- 0.411 -- -- -- 0.0659 4.04 -- -- -- --
36.47 0.281 11.7 -- -- -0.477 -- -- 0.0622 -- 65.89 47520 -- --
41.76 0.302 11.7 -- -- -- -- -- 0.075 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 20.35 humidity 50 14400 > th dose dependent rect. 3 3
9 20.39 humidity 60 14400 > th dose dependent rect. 3 1
21 20.44 humidity 50 14400 > th dose dependent rect. 5 1
45 20.53 wind 1 14400 < th dose dependent rect. 11 2
57 20.66 humidity 90 14400 < th dose dependent rect. 3 1
75 20.74 humidity 90 14400 < th dose dependent rect. 24 3
81 20.77 wind 1 14400 < th dose independent rect. 12 1
83 20.77 wind 1 14400 > th dose independent rect. 5 8
84 20.77 humidity 60 14400 < th dose dependent rect. 8 1
92 20.79 wind 1 14400 < th dose dependent rect. 22 15
93 20.80 humidity 60 14400 < th dose independent rect. 8 2
95 20.81 wind 1 14400 < th dose independent rect. 5 8
96 20.81 humidity 50 14400 < th dose dependent rect. 11 1
97 20.81 humidity 90 14400 < th dose dependent rect. 24 1
99 20.81 humidity 90 14400 < th dose dependent rect. 24 7
102 20.83 wind 9 14400 > th dose independent rect. 20 17
106 20.84 wind 1 14400 > th dose independent rect. 24 2
107 20.84 wind 1 14400 < th dose dependent rect. 24 2
115 20.86 wind 1 14400 > th dose independent rect. 12 1
129 20.88 humidity 60 14400 > th dose independent rect. 8 2
130 20.88 wind 9 14400 < th dose independent rect. 20 18
137 20.89 wind 1 14400 > th dose independent rect. 22 15
145 20.91 humidity 50 14400 < th dose independent rect. 11 1
147 20.91 wind 1 14400 > th dose independent rect. 5 5
161 20.91 wind 1 14400 < th dose dependent rect. 4 9
165 20.91 wind 1 14400 > th dose dependent rect. 17 15
166 20.92 radiation 30 43200 < th dose independent rect. 11 1
169 20.92 humidity 60 14400 > th dose independent rect. 24 10
175 20.92 wind 1 14400 < th dose independent rect. 22 15
177 20.92 wind 9 14400 < th dose dependent rect. 17 15
180 20.93 wind 1 14400 < th dose independent rect. 24 2
182 20.93 humidity 60 14400 > th dose independent rect. 3 7
218 20.97 wind 9 14400 > th dose dependent rect. 16 22
229 20.98 humidity 60 14400 < th dose dependent rect. 18 16
259 21.01 atmosphere 1010 14400 < th dose independent rect. 14 1
261 21.01 humidity 90 14400 < th dose independent rect. 3 2
270 21.02 wind 1 14400 > th dose independent rect. 8 1
274 21.02 humidity 50 14400 > th dose independent rect. 17 19
275 21.02 wind 1 14400 < th dose dependent sin 7 NA
285 21.03 humidity 50 14400 < th dose independent rect. 17 19
294 21.04 atmosphere 1010 14400 > th dose independent rect. 13 1
296 21.04 wind 9 14400 > th dose independent rect. 16 22
301 21.04 wind 1 14400 < th dose dependent rect. 22 9
308 21.04 wind 9 14400 > th dose dependent rect. 3 18
315 21.05 wind 9 14400 < th dose independent rect. 3 18
318 21.05 wind 9 14400 < th dose dependent sin 11 NA
322 21.05 humidity 50 14400 < th dose dependent rect. 17 19
328 21.06 wind 1 14400 < th dose independent rect. 8 1
336 21.06 wind 1 14400 > th dose dependent sin 12 NA
339 21.06 wind 3 14400 < th dose dependent rect. 22 1
351 21.07 wind 1 14400 < th dose independent rect. 8 5
357 21.07 humidity 50 14400 > th dose independent rect. 16 21
358 21.07 wind 9 14400 < th dose independent rect. 20 23
360 21.07 wind 3 14400 < th dose dependent rect. 7 1
377 21.07 humidity 50 14400 < th dose dependent rect. 16 21
378 21.07 wind 9 14400 > th dose dependent rect. 20 23
388 21.08 wind 1 14400 < th dose dependent rect. 8 5
410 21.09 wind 9 14400 < th dose independent rect. 17 21
417 21.09 wind 1 14400 < th dose dependent rect. 5 5
437 21.11 humidity 50 14400 > th dose independent rect. 11 1
444 21.11 humidity 50 14400 < th dose independent rect. 16 21
471 21.12 wind 9 14400 < th dose independent rect. 12 23
473 21.12 atmosphere 1010 14400 > th dose dependent rect. 12 1
480 21.12 wind 5 14400 < th dose dependent rect. 24 15
484 21.12 wind 5 14400 < th dose dependent rect. 22 17
498 21.13 wind 9 14400 < th dose independent rect. 12 21
501 21.13 wind 9 14400 > th dose dependent no NA NA
528 21.13 wind 9 14400 > th dose dependent rect. 10 21
535 21.14 wind 9 43200 > th dose independent rect. 15 1
539 21.14 wind 1 14400 > th dose independent rect. 22 4
541 21.14 wind 7 14400 < th dose independent rect. 15 4
565 21.14 wind 9 14400 < th dose dependent rect. 21 19
576 21.14 wind 9 14400 > th dose dependent rect. 12 23
577 21.15 humidity 60 4320 > th dose independent sin 8 NA
578 21.15 atmosphere 1010 14400 < th dose independent rect. 3 1
598 21.15 wind 9 14400 > th dose dependent rect. 20 17
609 21.16 wind 1 14400 > th dose independent sin 5 NA
610 21.16 atmosphere 1010 14400 < th dose independent rect. 16 1
611 21.16 radiation 10 43200 < th dose independent rect. 12 1
617 21.16 wind 7 14400 > th dose independent rect. 15 4
621 21.16 wind 9 14400 > th dose independent rect. 20 23
654 21.17 wind 9 14400 < th dose independent rect. 10 23
684 21.18 wind 9 14400 < th dose independent no NA NA
685 21.18 humidity 60 4320 < th dose independent sin 8 NA
686 21.18 atmosphere 1010 14400 > th dose independent rect. 3 1
689 21.18 radiation 30 43200 > th dose independent rect. 10 2
700 21.18 wind 9 14400 > th dose independent rect. 3 18
708 21.18 wind 9 14400 > th dose independent rect. 13 22
725 21.18 wind 9 14400 < th dose dependent rect. 24 15
732 21.18 wind 1 14400 > th dose dependent rect. 22 18
735 21.18 wind 1 14400 > th dose dependent rect. 20 19
743 21.19 atmosphere 1010 14400 > th dose independent rect. 16 1
751 21.19 wind 1 14400 < th dose independent rect. 22 4
756 21.19 atmosphere 1010 14400 > th dose independent rect. 3 7
759 21.19 wind 3 14400 > th dose independent rect. 18 14
778 21.19 wind 9 14400 < th dose independent rect. 6 23
779 21.19 wind 9 14400 < th dose independent rect. 8 23
781 21.19 wind 9 14400 > th dose dependent sin 17 NA
782 21.19 wind 9 14400 < th dose dependent rect. 5 1
843 21.20 atmosphere 1010 14400 > th dose independent rect. 3 14
857 21.20 wind 5 14400 < th dose dependent sin 5 NA
858 21.20 wind 9 14400 < th dose dependent sin 5 NA
859 21.20 wind 3 14400 < th dose dependent rect. 5 1
862 21.20 wind 9 14400 < th dose dependent rect. 5 3
909 21.21 wind 9 14400 < th dose independent rect. 12 9
913 21.21 atmosphere 1010 14400 > th dose independent rect. 3 12
937 21.21 wind 7 14400 > th dose dependent rect. 12 9
954 21.22 wind 1 14400 < th dose independent sin 5 NA
958 21.22 atmosphere 1010 14400 > th dose independent rect. 8 1
969 21.22 atmosphere 1010 14400 < th dose independent rect. 3 6
976 21.22 wind 9 14400 < th dose independent rect. 10 11
987 21.22 atmosphere 1010 14400 < th dose independent rect. 3 14
997 21.22 wind 9 14400 > th dose independent rect. 12 20