BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0934000 Os01g0934000|AK072525
(457 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G62770.1 | chr3:23218858-23221110 REVERSE LENGTH=426 488 e-138
AT3G56440.1 | chr3:20926874-20928797 FORWARD LENGTH=392 399 e-111
AT2G40810.1 | chr2:17032686-17034338 FORWARD LENGTH=394 392 e-109
AT5G05150.1 | chr5:1524841-1526199 REVERSE LENGTH=375 277 9e-75
AT4G30510.1 | chr4:14905299-14906915 REVERSE LENGTH=313 103 2e-22
>AT3G62770.1 | chr3:23218858-23221110 REVERSE LENGTH=426
Length = 425
Score = 488 bits (1255), Expect = e-138, Method: Compositional matrix adjust.
Identities = 242/355 (68%), Positives = 268/355 (75%), Gaps = 9/355 (2%)
Query: 99 LLHISFNQDYGCFAAGTKSGFRIYNCDPFREIFRRDLXXXXXXXXXXXXXXXXXXEMLFR 158
+LH+SFNQD+ CFA GT GFRI NCDPFREIFRRD EMLFR
Sbjct: 78 VLHLSFNQDHACFAVGTDRGFRILNCDPFREIFRRDFDRGGGVAVV---------EMLFR 128
Query: 159 CNILALVGGGDAPHYPPNKVMIWDDHQSRCIGELSFRSPXXXXXXXXXXXXXXXENKIFV 218
CNILALVGGG P YPPNKVMIWDDHQ RCIGELSFRS E KIFV
Sbjct: 129 CNILALVGGGPDPQYPPNKVMIWDDHQGRCIGELSFRSDVRSVRLRRDRIIVVLEQKIFV 188
Query: 219 YNFADLKLVHQIETAPNPKGLCAVSQQPGSIVLVCPGAQKGQVRVEHYGARKTKFINAHT 278
YNF+DLKL+HQIET NPKGLCAVSQ GS+VLVCPG QKGQVR+EHY +++TKF+ AH
Sbjct: 189 YNFSDLKLMHQIETIANPKGLCAVSQGVGSMVLVCPGLQKGQVRIEHYASKRTKFVMAHD 248
Query: 279 SRVACFALSQDGRLIATASTKGTLVRIYNAAEGNLLQEVRRGADRAEIYSLAFSNNLQYL 338
SR+ACFAL+QDG L+ATAS+KGTLVRI+N +G L QEVRRGADRAEIYSLAFS+N Q+L
Sbjct: 249 SRIACFALTQDGHLLATASSKGTLVRIFNTVDGTLRQEVRRGADRAEIYSLAFSSNAQWL 308
Query: 339 AVSSDKGTIHVFNLKINVGLTTNDKPLPAPDPDVPHISPSLSFIKGVLPKYFHSEWSVAQ 398
AVSSDKGT+HVF LK+N G D APD S SLS KGVLP+YF SEWSVAQ
Sbjct: 309 AVSSDKGTVHVFGLKVNSGSQVKDSSRIAPDATPSSPSSSLSLFKGVLPRYFSSEWSVAQ 368
Query: 399 FRLHEGEQYIVAFGHEKNTVAVVGMDGSFYRCQFDPVNGGEMLQLECYNFLKPSS 453
FRL EG QYI AFGH+KNTV ++GMDGSFYRCQFDPVNGGEM QLE +N LKP S
Sbjct: 369 FRLVEGTQYIAAFGHQKNTVVILGMDGSFYRCQFDPVNGGEMSQLEYHNCLKPPS 423
>AT3G56440.1 | chr3:20926874-20928797 FORWARD LENGTH=392
Length = 391
Score = 399 bits (1026), Expect = e-111, Method: Compositional matrix adjust.
Identities = 197/367 (53%), Positives = 249/367 (67%), Gaps = 23/367 (6%)
Query: 98 DLLHISFNQDYGCFAAGTKSGFRIYNCDPFREIFRRDLXXXXXXXXXXXXXXXXXXEMLF 157
+L+ +S+NQDY CFAAGT GFRIYNC+PF+E FRR+L EMLF
Sbjct: 35 ELVSVSWNQDYSCFAAGTSHGFRIYNCEPFKETFRRELKDGGFKIV----------EMLF 84
Query: 158 RCNILALVGGGDAPHYPPNKVMIWDDHQSRCIGELSFRSPXXXXXXXXXXXXXXXENKIF 217
R NILALVGGG YP NKV+IWDDHQ RCI E +FRS E+KI+
Sbjct: 85 RSNILALVGGGPNSQYPSNKVLIWDDHQGRCISEFTFRSEIRAVKLRRDRIVVVLEHKIY 144
Query: 218 VYNFADLKLVHQIETAPNPKGLCAVSQQPGSIVLVCPGAQKGQVRVEHYGARKTKFINAH 277
VYNF DL+L+HQIE NP+GLC +S + VL CPG ++G+VRVEH+G + INAH
Sbjct: 145 VYNFMDLRLLHQIENMANPRGLCCLSHHMNTSVLACPGIRRGEVRVEHFGLNMVQIINAH 204
Query: 278 TSRVACFALSQDGRLIATASTKGTLVRIYNAAEGNLLQEVRRGADRAEIYSLAFSNNLQY 337
S +AC L+ DG L+ATASTKGTL+RI+N +G LQEVRRG DRA+IYS+A S N+Q+
Sbjct: 205 DSNIACMTLTLDGLLLATASTKGTLIRIFNTMDGTRLQEVRRGVDRADIYSIALSPNVQW 264
Query: 338 LAVSSDKGTIHVFNLKINV-----------GLTTNDKPLPAPDPDVPHISPSLSFIKGVL 386
LAVSSDKGT+H+F+L++ V + + +PL +P + SLSF++GVL
Sbjct: 265 LAVSSDKGTVHIFSLRVRVIGEDAYSTEHETSSNSLQPLVSPASGA-NPGSSLSFLRGVL 323
Query: 387 PKYFHSEWSVAQFRLHEGEQYIVAFGHEKNTVAVVGMDGSFYRCQFDPVNGGEMLQLECY 446
PKYF SEWS +QF + E QY AFG +NT+A++G+DGSFYRC FDPVNGGEM QLE +
Sbjct: 324 PKYFSSEWSFSQFHVPEVTQYFAAFG-AQNTIAIIGLDGSFYRCNFDPVNGGEMTQLEHF 382
Query: 447 NFLKPSS 453
+FLK S
Sbjct: 383 HFLKQDS 389
>AT2G40810.1 | chr2:17032686-17034338 FORWARD LENGTH=394
Length = 393
Score = 392 bits (1006), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/369 (53%), Positives = 245/369 (66%), Gaps = 27/369 (7%)
Query: 98 DLLHISFNQDYGCFAAGTKSGFRIYNCDPFREIFRRDLXXXXXXXXXXXXXXXXXXEMLF 157
+L+ + +NQD CFAAGT GFRIYNC+PF+E FRR+L EMLF
Sbjct: 31 ELVSVCWNQDSSCFAAGTSHGFRIYNCEPFKETFRRELKDGGFKIV----------EMLF 80
Query: 158 RCNILALVGGGDAPHYPPNKVMIWDDHQSRCIGELSFRSPXXXXXXXXXXXXXXXENKIF 217
R NILALVGGG YP +KV+IWDDHQSRCI E +FRS E+KI+
Sbjct: 81 RSNILALVGGGPNSQYPSSKVLIWDDHQSRCISEFAFRSEIRAVKLRRDRIVVVLEHKIY 140
Query: 218 VYNFADLKLVHQIETAPNPKGLCAVSQQPGSIVLVCPGAQKGQVRVEHYGARKTKFINAH 277
VYNF DL+L+HQIET NP+GLC +S + VL CPG +G++RVEH+G + INAH
Sbjct: 141 VYNFMDLRLLHQIETQANPRGLCCLSHHSNTSVLACPGLNRGEIRVEHFGLNMVQIINAH 200
Query: 278 TSRVACFALSQDGRLIATASTKGTLVRIYNAAEGNLLQEVRRGADRAEIYSLAFSNNLQY 337
S +AC L+ DG L+ATASTKGTL+RI+N +G LQEVRRG DRA+IYS+A S N+Q+
Sbjct: 201 DSSIACMTLTLDGLLLATASTKGTLIRIFNTMDGTRLQEVRRGVDRADIYSIALSPNVQW 260
Query: 338 LAVSSDKGTIHVFNLKINV----GLTTNDKPLPA----PDPDVPHISP--------SLSF 381
LAVSSDKGT+H+F+L++ V +T + L + +SP SLSF
Sbjct: 261 LAVSSDKGTVHIFSLRVRVVGEDSYSTENGALLTQQNYSNSLQGLVSPTIGTNPGSSLSF 320
Query: 382 IKGVLPKYFHSEWSVAQFRLHEGEQYIVAFGHEKNTVAVVGMDGSFYRCQFDPVNGGEML 441
++GVLPKYF SEWS AQF + E Q+ AFG NTVA++GMDGSFYRC FDPVNGGEM
Sbjct: 321 MRGVLPKYFSSEWSYAQFHVSEVTQFFAAFG-SNNTVAIIGMDGSFYRCSFDPVNGGEMG 379
Query: 442 QLECYNFLK 450
QLE +F+K
Sbjct: 380 QLEYIHFMK 388
>AT5G05150.1 | chr5:1524841-1526199 REVERSE LENGTH=375
Length = 374
Score = 277 bits (708), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 151/350 (43%), Positives = 206/350 (58%), Gaps = 30/350 (8%)
Query: 99 LLHISFNQDYGCFAAGTKSGFRIYNCDPFREIFRRDLXXXXXXXXXXXXXXXXXXEMLFR 158
+L +++NQ F GT GF +Y+C P + ++ + EMLF
Sbjct: 33 VLSVAWNQVCSGFIVGTNHGFNVYSCKP---MIKKSISRAPHESGFKVA------EMLFL 83
Query: 159 CNILALVGGG-DAPHYPPNKVMIWDDHQSRCIGELSFRSPXXXXXXXXXXXXXXXENKIF 217
N+ A VG G + YPPNKV +WDD+++ C+ EL+F+S + I+
Sbjct: 84 SNLFAFVGNGYNNSEYPPNKVFVWDDYRNCCLSELTFKSEVIAVKLAREHVVVVLKQNIY 143
Query: 218 VYNFADLKLVHQIETAPNPKGLCAVSQQPGSIVLVCPGAQKGQVRVEHYGARKTKFINAH 277
VY F +LK+ IET NPKGLC V+ VL CPG GQV+V KFI AH
Sbjct: 144 VYTFNNLKVDRVIETLMNPKGLCCVTHVESKAVLACPGFHPGQVQVHDLRWNVIKFIKAH 203
Query: 278 TSRVACFALSQDGRLIATASTKGTLVRIYNAAEGNLLQEVRRGADRAEIYSLAFSNNLQY 337
S +AC L+ DG L+ATASTKGTL+RI+NA +G LLQE RRG +RAEIY++A S+NL++
Sbjct: 204 DSAIACMTLTLDGSLLATASTKGTLIRIFNAVDGTLLQEFRRGVERAEIYNVAISSNLKW 263
Query: 338 LAVSSDKGTIHVFNLKINVGLTTNDKPLPAPDPDVPHISP--SLSFIKGVLPKY-FHSEW 394
+A SS+KGT+HVF L+ PD+ P S SFI+ +LPKY + +E
Sbjct: 264 VAASSEKGTLHVFRLR----------------PDILSFDPASSSSFIRVILPKYLYENER 307
Query: 395 SVAQFRLHEGEQYIVAFGHEKNTVAVVGMDGSFYRCQFDPVNGGEMLQLE 444
S AQF L ++IV FG E NTV +VG+DGSF RC+FD +GG+M++LE
Sbjct: 308 SFAQFSLPASTKFIVGFGSE-NTVLLVGIDGSFRRCKFDHADGGQMVELE 356
>AT4G30510.1 | chr4:14905299-14906915 REVERSE LENGTH=313
Length = 312
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 130/303 (42%), Gaps = 22/303 (7%)
Query: 155 MLFRCNILALVGGGDAPHYPPNKVMIWDDHQSRCIGELSFRSPXXXXXXXXXXXXXXXEN 214
ML+ ++LA+VG G+ P ++ ++ + EL+F +
Sbjct: 1 MLYSSDLLAIVGAGEQASLSPRRLCLFKTTTGLPLRELNFLTSILAVRMNKKRLVVVLLE 60
Query: 215 KIFVYNFADLKLVHQIETAPNPKGLCAVSQQPGSIVLVCPGAQ-KGQVRVEHYGARKT-K 272
K FVY+ L ++ I+T PNPKGL A S L P + KG V V + ++
Sbjct: 61 KTFVYDLNTLVMLDTIDTVPNPKGLSAFSPSLEGCYLAVPASTTKGSVLVYNVMDLQSHS 120
Query: 273 FINAHTSRVACFALSQDGRLIATASTKGTLVRIYNAAEGNLLQEVRRGADRAEIYSLAFS 332
I+AH S +A ALS +G IAT S +GTL+R++ +E RRG + IYSL+F
Sbjct: 121 EIDAHRSPLAAIALSSNGMYIATGSEQGTLIRVHLVSEATKSYSFRRGTYPSTIYSLSFG 180
Query: 333 NNLQY---LAVSSDKGTIHVFNLKINV-----------GLTTNDKPLPAPDPDVPHISPS 378
+ Q L +S G+IH F+L + + G D A DP H+
Sbjct: 181 PSTQLPDILIATSSSGSIHAFSLSLAINQRSKRSTSFLGSVLPDSVSDALDPAHHHV--- 237
Query: 379 LSFIKGVLPKYFHSEWSVAQFRLHEGEQYIVAFGHEKNTVAVVGMDGSFYRCQFDPVNGG 438
++ + S V + EG F + TV+V+ +G F N
Sbjct: 238 ---LQNAVSSGIRSYAVVRKIDKLEGTSSPSHFTSLRATVSVITYNGYFQEYTLSINNKN 294
Query: 439 EML 441
E L
Sbjct: 295 ESL 297
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.138 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,714,289
Number of extensions: 296295
Number of successful extensions: 790
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 777
Number of HSP's successfully gapped: 5
Length of query: 457
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 355
Effective length of database: 8,310,137
Effective search space: 2950098635
Effective search space used: 2950098635
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 113 (48.1 bits)