Os01g0933500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0933500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 715.32 | 1.26 | 6.85 | 3.51 | 1.46 | 4.17 | -0.782 | -2.12 | 1.35 | 7.36 | 29.2 | 1374 | 14.3 | -- |
| 717.16 | 1.25 | 6.87 | 3.01 | 1.55 | 3.9 | -0.96 | -- | 1.31 | 7.37 | 29.3 | 1371 | 15.2 | -- |
| 716.81 | 1.25 | 6.85 | 3.48 | 1.49 | 4.16 | -- | -2.06 | 1.38 | 7.45 | 29.21 | 1369 | 14.7 | -- |
| 718.91 | 1.25 | 6.89 | 2.99 | 1.56 | 3.91 | -- | -- | 1.28 | 7.33 | 29.3 | 1372 | 15.3 | -- |
| 747.46 | 1.27 | 6.91 | 3.48 | -- | 5.82 | -- | -1.75 | 1.17 | -- | 29.3 | 1281 | 10.7 | -- |
| 1410.49 | 1.76 | 7.01 | 1.69 | 1.56 | -- | -1.14 | -- | 0.777 | 7.18 | -- | -- | -- | -- |
| 1413.74 | 1.76 | 7.01 | 1.67 | 1.55 | -- | -- | -- | 0.78 | 7.32 | -- | -- | -- | -- |
| 744.82 | 1.27 | 6.97 | 2.9 | -- | 5.51 | -- | -- | 1.13 | -- | 28.74 | 1263 | 10.8 | -- |
| 937.09 | 1.43 | 7.02 | -- | 1.13 | 4.15 | -- | -- | 0.754 | 8.15 | 29.2 | 1299 | 13.1 | -- |
| 1541.51 | 1.83 | 7.04 | 1.69 | -- | -- | -- | -- | 0.806 | -- | -- | -- | -- | -- |
| 1487.03 | 1.8 | 7.05 | -- | 1.57 | -- | -- | -- | 0.595 | 7.25 | -- | -- | -- | -- |
| 948.63 | 1.43 | 7.1 | -- | -- | 5.08 | -- | -- | 0.554 | -- | 29.21 | 1251 | 10.7 | -- |
| 1617.2 | 1.88 | 7.09 | -- | -- | -- | -- | -- | 0.618 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 720.19 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 11 |
| 2 | 729.80 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 11 |
| 4 | 733.67 | temperature | 25 | 1440 | > th | dose dependent | rect. | 7 | 12 |
| 20 | 735.76 | temperature | 25 | 1440 | > th | dose dependent | sin | 0 | NA |
| 56 | 737.62 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 11 |
| 111 | 740.14 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 132 | 740.83 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 152 | 741.43 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 153 | 741.52 | temperature | 25 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 156 | 741.74 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 164 | 742.37 | temperature | 25 | 1440 | > th | dose dependent | rect. | 10 | 23 |
| 189 | 743.82 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 18 |
| 191 | 743.88 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 8 |
| 192 | 743.89 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 5 |
| 196 | 743.90 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 15 |
| 202 | 743.94 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 13 |
| 206 | 744.03 | temperature | 25 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 209 | 744.14 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 218 | 744.74 | temperature | 30 | 14400 | > th | dose independent | rect. | 14 | 5 |
| 237 | 745.03 | temperature | 25 | 14400 | > th | dose dependent | rect. | 17 | 3 |
| 246 | 745.57 | temperature | 25 | 4320 | > th | dose dependent | rect. | 8 | 3 |
| 248 | 745.77 | humidity | 90 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 304 | 748.68 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 333 | 750.28 | temperature | 30 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 339 | 750.63 | temperature | 30 | 14400 | < th | dose independent | sin | 13 | NA |
| 345 | 751.04 | temperature | 30 | 14400 | > th | dose independent | sin | 13 | NA |
| 426 | 755.80 | wind | 5 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 430 | 756.16 | humidity | 60 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 464 | 758.54 | wind | 5 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 535 | 762.04 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 612 | 763.92 | temperature | 25 | 14400 | > th | dose dependent | rect. | 16 | 13 |
| 616 | 763.98 | humidity | 90 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 647 | 764.93 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 719 | 767.22 | temperature | 30 | 1440 | < th | dose independent | rect. | 10 | 6 |
| 730 | 767.51 | temperature | 25 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 737 | 767.60 | temperature | 25 | 14400 | > th | dose independent | rect. | 19 | 3 |
| 750 | 767.96 | wind | 5 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 779 | 768.74 | temperature | 25 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 801 | 768.85 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 3 |
| 805 | 768.93 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 869 | 770.05 | humidity | 60 | 14400 | < th | dose dependent | rect. | 16 | 16 |
| 872 | 770.11 | temperature | 25 | 14400 | < th | dose independent | rect. | 19 | 3 |
| 889 | 770.54 | humidity | 60 | 14400 | < th | dose dependent | rect. | 16 | 6 |
| 941 | 771.26 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 4 |
| 945 | 771.31 | temperature | 25 | 14400 | > th | dose dependent | sin | 14 | NA |
| 983 | 771.93 | temperature | 20 | 14400 | > th | dose dependent | rect. | 21 | 1 |