Os01g0931200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Armadillo-like helical domain containing protein.
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Os01g0931200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Armadillo-like helical domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 441.76 | 0.988 | 3.36 | -0.0121 | 0.372 | 0.601 | 0.0297 | -2.78 | 0.261 | 12 | 0.966 | 1928 | -- | -- |
| 450.22 | 0.988 | 3.28 | 0.00866 | 0.432 | 0.666 | -0.0989 | -- | 0.356 | 11.3 | 1.554 | 4264 | -- | -- |
| 441.76 | 0.979 | 3.36 | -0.01 | 0.371 | 0.599 | -- | -2.77 | 0.261 | 12 | 0.9613 | 1928 | -- | -- |
| 450.15 | 0.988 | 3.28 | -0.0423 | 0.4 | 0.723 | -- | -- | 0.36 | 11.5 | 1.498 | 4264 | -- | -- |
| 450.31 | 0.988 | 3.37 | -0.0428 | -- | 0.663 | -- | -2.95 | 0.269 | -- | 0.9644 | 1982 | -- | -- |
| 456.62 | 1 | 3.33 | 0.185 | 0.423 | -- | -0.276 | -- | 0.15 | 11.4 | -- | -- | -- | -- |
| 456.94 | 1 | 3.33 | 0.174 | 0.424 | -- | -- | -- | 0.149 | 11.5 | -- | -- | -- | -- |
| 456.74 | 0.995 | 3.28 | -0.111 | -- | 0.933 | -- | -- | 0.413 | -- | 1.6 | 5105 | -- | -- |
| 449.91 | 0.988 | 3.28 | -- | 0.406 | 0.719 | -- | -- | 0.365 | 11.7 | 1.3 | 4286 | -- | -- |
| 468.24 | 1.01 | 3.34 | 0.162 | -- | -- | -- | -- | 0.144 | -- | -- | -- | -- | -- |
| 457.74 | 1 | 3.33 | -- | 0.422 | -- | -- | -- | 0.129 | 11.5 | -- | -- | -- | -- |
| 456.97 | 0.996 | 3.29 | -- | -- | 0.918 | -- | -- | 0.397 | -- | 1.3 | 5077 | -- | -- |
| 468.94 | 1.01 | 3.34 | -- | -- | -- | -- | -- | 0.126 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 433.12 | radiation | 1.0 | 10 | < th | dose independent | rect. | 6 | 1 |
| 3 | 435.73 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 4 | 3 |
| 4 | 435.74 | wind | 3.0 | 90 | > th | dose dependent | rect. | 4 | 3 |
| 5 | 435.80 | radiation | 30.0 | 270 | > th | dose independent | rect. | 8 | 2 |
| 6 | 435.84 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 4 | 10 |
| 10 | 435.85 | wind | 3.0 | 90 | > th | dose dependent | rect. | 5 | 1 |
| 11 | 435.86 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 4 | 3 |
| 12 | 435.86 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 4 | 10 |
| 16 | 435.91 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 4 | 4 |
| 38 | 436.05 | wind | 3.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 42 | 436.10 | wind | 3.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 132 | 436.86 | wind | 5.0 | 90 | > th | dose independent | rect. | 4 | 3 |
| 138 | 436.91 | wind | 3.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 144 | 437.01 | precipitation | 0.1 | 10 | > th | dose independent | sin | 1 | NA |
| 152 | 437.20 | precipitation | 0.1 | 10 | > th | dose dependent | sin | 1 | NA |
| 153 | 437.26 | precipitation | 0.1 | 10 | < th | dose independent | sin | 1 | NA |
| 154 | 437.26 | precipitation | 0.1 | 10 | < th | dose dependent | sin | 1 | NA |
| 167 | 437.75 | radiation | 30.0 | 270 | > th | dose independent | sin | 11 | NA |
| 171 | 438.00 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 177 | 438.45 | wind | 1.0 | 10 | < th | dose dependent | rect. | 3 | 1 |
| 179 | 438.53 | wind | 1.0 | 1440 | < th | dose independent | rect. | 2 | 18 |
| 190 | 438.85 | wind | 1.0 | 1440 | > th | dose independent | rect. | 2 | 18 |
| 193 | 438.97 | wind | 1.0 | 1440 | < th | dose independent | rect. | 2 | 15 |
| 214 | 439.33 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 8 | 1 |
| 218 | 439.42 | wind | 1.0 | 1440 | > th | dose independent | rect. | 2 | 15 |
| 246 | 440.24 | wind | 1.0 | 1440 | < th | dose independent | sin | 1 | NA |
| 247 | 440.29 | wind | 1.0 | 1440 | > th | dose independent | sin | 1 | NA |
| 249 | 440.33 | radiation | 20.0 | 270 | > th | dose dependent | rect. | 16 | 18 |
| 252 | 440.42 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 315 | 441.19 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 2 | 18 |
| 367 | 441.41 | wind | 1.0 | 30 | > th | dose independent | rect. | 24 | 8 |
| 378 | 441.48 | wind | 1.0 | 4320 | < th | dose independent | rect. | 2 | 8 |
| 395 | 441.52 | wind | 1.0 | 1440 | > th | dose independent | rect. | 5 | 15 |
| 399 | 441.60 | wind | 1.0 | 1440 | > th | dose independent | rect. | 5 | 12 |
| 405 | 441.69 | wind | 1.0 | 4320 | > th | dose independent | rect. | 2 | 8 |
| 409 | 441.72 | radiation | 20.0 | 270 | > th | dose dependent | sin | 11 | NA |
| 412 | 441.75 | wind | 1.0 | 1440 | < th | dose independent | rect. | 5 | 12 |
| 415 | 441.81 | wind | 1.0 | 1440 | < th | dose independent | rect. | 5 | 15 |
| 418 | 441.83 | wind | 1.0 | 1440 | < th | dose dependent | sin | 0 | NA |
| 425 | 441.90 | radiation | 30.0 | 270 | < th | dose independent | sin | 10 | NA |
| 429 | 441.93 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 2 | 15 |
| 438 | 442.02 | radiation | 40.0 | 30 | < th | dose independent | rect. | 10 | 22 |
| 472 | 442.15 | wind | 1.0 | 30 | < th | dose independent | rect. | 3 | 1 |
| 493 | 442.21 | radiation | 30.0 | 270 | < th | dose independent | rect. | 23 | 12 |
| 494 | 442.26 | wind | 3.0 | 1440 | < th | dose dependent | rect. | 18 | 2 |
| 524 | 442.45 | wind | 3.0 | 4320 | < th | dose independent | rect. | 8 | 2 |
| 527 | 442.48 | wind | 3.0 | 4320 | > th | dose independent | rect. | 8 | 2 |
| 576 | 442.63 | wind | 1.0 | 1440 | > th | dose independent | rect. | 5 | 18 |
| 579 | 442.65 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 9 | 6 |
| 593 | 442.73 | wind | 1.0 | 1440 | < th | dose independent | rect. | 5 | 18 |
| 613 | 442.76 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 5 | 15 |
| 636 | 442.92 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 5 | 12 |
| 658 | 442.96 | wind | 1.0 | 30 | > th | dose independent | rect. | 13 | 19 |
| 663 | 443.00 | wind | 1.0 | 4320 | < th | dose dependent | rect. | 2 | 11 |
| 699 | 443.16 | wind | 1.0 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 711 | 443.25 | wind | 1.0 | 4320 | < th | dose independent | sin | 5 | NA |
| 713 | 443.25 | wind | 1.0 | 1440 | < th | dose independent | rect. | 5 | 23 |
| 721 | 443.32 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 10 | 3 |
| 742 | 443.42 | wind | 1.0 | 4320 | > th | dose independent | sin | 5 | NA |
| 784 | 443.53 | wind | 5.0 | 4320 | < th | dose dependent | rect. | 8 | 2 |
| 827 | 443.60 | wind | 1.0 | 1440 | > th | dose independent | rect. | 5 | 23 |
| 856 | 443.64 | radiation | 30.0 | 90 | < th | dose independent | rect. | 24 | 14 |
| 860 | 443.66 | wind | 1.0 | 1440 | > th | dose independent | rect. | 18 | 2 |
| 872 | 443.70 | wind | 1.0 | 1440 | < th | dose independent | rect. | 18 | 23 |
| 920 | 443.84 | wind | 1.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 921 | 443.84 | wind | 1.0 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 928 | 443.86 | wind | 1.0 | 1440 | < th | dose independent | rect. | 8 | 23 |
| 944 | 443.92 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 9 | 9 |
| 946 | 443.93 | wind | 1.0 | 1440 | < th | dose independent | rect. | 9 | 4 |
| 956 | 443.96 | wind | 1.0 | 10 | < th | dose independent | rect. | 22 | 1 |
| 958 | 443.96 | wind | 1.0 | 10 | < th | dose dependent | rect. | 22 | 1 |
| 963 | 443.97 | wind | 1.0 | 1440 | > th | dose independent | rect. | 11 | 4 |
| 984 | 443.99 | wind | 1.0 | 1440 | < th | dose independent | no | NA | NA |