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Os01g0928100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.5 (0.0194) R2 : 0.0483
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.197 (0.0408) R2dN8 : 0.0624 R2N8 : 0.0483
σ : 0.365
deviance : 61.22
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
39.01 0.293 10.5 -0.669 0.294 0.546 0.519 -1.34 -0.0505 2.07 19.9 2628 -- --
41.21 0.299 10.5 -0.513 0.307 0.909 0.505 -- -0.0437 2.01 19.1 2696 -- --
39.84 0.294 10.5 -0.65 0.301 0.6 -- -1.21 -0.0398 2.31 19.5 2663 -- --
41.7 0.301 10.5 -0.483 0.298 0.875 -- -- -0.00359 2.29 19.1 2723 -- --
45.07 0.313 10.5 -0.655 -- 0.632 -- -1.18 -0.0332 -- 19.5 2551 -- --
53.93 0.344 10.5 -0.0478 0.337 -- 0.341 -- 0.186 2.13 -- -- -- --
54.35 0.345 10.5 -0.058 0.339 -- -- -- 0.183 2.35 -- -- -- --
46.52 0.318 10.5 -0.491 -- 0.917 -- -- 0.00261 -- 19.03 2466 -- --
45.47 0.314 10.5 -- 0.334 0.681 -- -- 0.113 2.39 19.1 1937 -- --
61.17 0.365 10.5 -0.0437 -- -- -- -- 0.192 -- -- -- -- --
54.44 0.345 10.5 -- 0.338 -- -- -- 0.19 2.35 -- -- -- --
51.09 0.333 10.5 -- -- 0.649 -- -- 0.0974 -- 19.12 2284 -- --
61.22 0.365 10.5 -- -- -- -- -- 0.197 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 35.51 humidity 90 14400 > th dose dependent rect. 6 1
18 37.36 humidity 90 14400 > th dose dependent rect. 5 21
31 37.65 humidity 90 14400 > th dose dependent rect. 5 14
35 37.67 humidity 90 14400 > th dose dependent rect. 4 16
37 37.69 humidity 90 14400 > th dose dependent sin 1 NA
64 37.88 humidity 90 14400 > th dose independent rect. 6 1
75 37.99 humidity 90 14400 > th dose independent rect. 18 1
91 38.14 humidity 90 14400 > th dose dependent sin 17 NA
104 38.20 humidity 90 14400 < th dose independent rect. 6 2
108 38.21 radiation 20 4320 > th dose dependent rect. 16 16
109 38.24 humidity 90 14400 > th dose dependent no NA NA
114 38.27 humidity 90 14400 > th dose dependent rect. 17 8
118 38.29 humidity 90 14400 > th dose dependent rect. 21 23
120 38.30 humidity 90 14400 > th dose dependent rect. 13 23
136 38.37 humidity 90 14400 > th dose dependent rect. 9 23
152 38.44 humidity 90 14400 > th dose independent rect. 6 5
153 38.44 humidity 90 14400 < th dose independent rect. 6 5
161 38.46 humidity 90 14400 > th dose dependent rect. 22 1
172 38.51 temperature 20 1440 > th dose independent rect. 6 1
178 38.54 temperature 20 4320 > th dose independent rect. 19 3
189 38.56 temperature 20 4320 > th dose independent rect. 18 6
208 38.64 humidity 90 14400 < th dose independent rect. 6 19
231 38.69 temperature 20 4320 < th dose independent rect. 19 4
238 38.70 temperature 20 4320 < th dose independent rect. 18 6
243 38.71 humidity 90 14400 > th dose independent rect. 6 20
251 38.73 wind 5 43200 < th dose dependent rect. 6 1
272 38.77 wind 3 43200 < th dose dependent rect. 6 3
277 38.79 temperature 20 4320 > th dose independent rect. 20 1
291 38.83 wind 3 43200 < th dose independent rect. 6 1
304 38.85 wind 1 43200 > th dose dependent rect. 6 1
315 38.87 humidity 90 14400 > th dose independent rect. 2 21
326 38.89 temperature 20 1440 < th dose independent rect. 5 2
336 38.90 humidity 90 14400 > th dose independent sin 2 NA
346 38.92 wind 3 43200 < th dose independent rect. 6 3
355 38.93 humidity 90 14400 > th dose independent rect. 2 18
362 38.94 wind 3 43200 > th dose independent rect. 6 1
363 38.94 wind 3 43200 > th dose independent rect. 6 3
368 38.94 humidity 90 14400 > th dose dependent rect. 21 3
371 38.95 humidity 90 14400 > th dose independent rect. 5 15
379 38.96 radiation 20 4320 > th dose dependent rect. 6 2
396 38.97 radiation 30 4320 < th dose independent rect. 24 8
419 39.00 humidity 90 14400 < th dose independent rect. 6 13
461 39.05 humidity 90 14400 > th dose independent rect. 21 23
488 39.08 radiation 30 4320 < th dose independent rect. 6 2
492 39.08 humidity 90 14400 > th dose independent rect. 17 23
504 39.10 humidity 90 14400 > th dose independent no NA NA
541 39.13 temperature 20 1440 < th dose independent rect. 22 12
549 39.13 humidity 90 14400 > th dose independent rect. 14 23
568 39.15 temperature 20 1440 > th dose independent rect. 22 12
597 39.18 humidity 90 14400 > th dose independent rect. 9 23
617 39.20 temperature 25 1440 < th dose dependent rect. 8 1
618 39.20 humidity 90 14400 > th dose dependent rect. 18 1
644 39.23 temperature 20 1440 > th dose independent sin 8 NA
653 39.24 humidity 90 14400 > th dose independent sin 19 NA
661 39.25 temperature 20 1440 < th dose independent sin 8 NA
670 39.25 temperature 10 1440 > th dose dependent rect. 7 2
758 39.31 humidity 90 14400 < th dose independent sin 20 NA
759 39.31 humidity 90 14400 < th dose independent sin 1 NA
854 39.36 temperature 20 1440 < th dose independent rect. 2 6
855 39.36 temperature 20 1440 > th dose independent rect. 1 8
856 39.36 temperature 20 1440 < th dose independent rect. 1 8
944 39.41 humidity 90 14400 > th dose independent rect. 9 2
947 39.41 temperature 20 1440 > th dose independent rect. 2 6
962 39.42 humidity 90 14400 < th dose independent rect. 18 1
985 39.43 humidity 90 14400 < th dose independent rect. 17 23