BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0928100 Os01g0928100|AK120714
(570 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G48860.2 | chr3:18117619-18121853 FORWARD LENGTH=578 486 e-137
AT5G23700.1 | chr5:7992851-7996420 FORWARD LENGTH=574 429 e-120
AT5G13260.1 | chr5:4243164-4246677 FORWARD LENGTH=538 427 e-120
AT4G25070.2 | chr4:12872482-12876468 FORWARD LENGTH=768 400 e-112
AT4G08630.1 | chr4:5506998-5511959 REVERSE LENGTH=846 318 7e-87
>AT3G48860.2 | chr3:18117619-18121853 FORWARD LENGTH=578
Length = 577
Score = 486 bits (1251), Expect = e-137, Method: Compositional matrix adjust.
Identities = 265/462 (57%), Positives = 325/462 (70%), Gaps = 20/462 (4%)
Query: 120 GVSLLGRTARSPSPALGRNIVEP-PPTVRSTSAGRPAVASRPTT-----TVVPPIKTSTT 173
VS RT RSPSPALGRN E P +VRS SAGRP++++R TT ++PP + S
Sbjct: 119 AVSFAPRT-RSPSPALGRNFAEQVPSSVRSASAGRPSMSARSTTPTPIPNLMPPSRVSV- 176
Query: 174 LRTXXXXXXXXXXXXXDRSRQKRF--DTGHLNSRESTPKREASALQDELDILQEENESVX 231
RSR KRF D +NS+E +REASAL+DELD+LQEENE+V
Sbjct: 177 ----KTPVSIPPLDPPTRSRDKRFFADVPSVNSKEKGDQREASALRDELDMLQEENENVL 232
Query: 232 XXXXXXXXXXXXXXXXXXXXXXQVAALGEGVSLEARLLSRKEAALKQREAALKAARESKD 291
QVA+LGEGVSLEA+LLSRKEAAL+QREAAL A++ K
Sbjct: 233 EKLRRAEEKRVEAEARAKELEKQVASLGEGVSLEAKLLSRKEAALRQREAALNVAKQKKS 292
Query: 292 GKDGEVTTLKHELDCAKEEVVTAMEQLKEAETETKALRSMTQRMILTQEEMEEVVLKRCW 351
GKD E+ +L+ EL+ K+E TA E+L+EAE+E K+LR+MTQRMILTQ+EMEEVVLKRCW
Sbjct: 293 GKDEEIVSLRSELENLKDEATTAAERLQEAESEAKSLRTMTQRMILTQDEMEEVVLKRCW 352
Query: 352 LSRYWGLAVQYGVYPEIAVSKHEHWSSLAPLPLEVVLSAGQKAKEEPLKQGEDDAQRRNK 411
L+RYWGLAVQ+G+ +IA S+ EHWS LAPLP E+V SA QKAKE +G +D R+K
Sbjct: 353 LARYWGLAVQHGICADIAPSRQEHWSKLAPLPFELVTSAAQKAKELSWDKGGND---RSK 409
Query: 412 LVRDMSDVMGEGNIESMLSVEMGLRELSSLKVEDAVVVALGQHRRPSIVRQFTSDFKSPG 471
RD+SD+ GEGNIESMLSVEMGLREL+SLKVEDAVV+ Q R+ S+VR SD K G
Sbjct: 410 AARDLSDLTGEGNIESMLSVEMGLRELASLKVEDAVVLIFAQQRKLSLVRHTVSDSKGHG 469
Query: 472 EPKFLEAFDLSHEEAEDVSFKQAWLIYFWRRAKTHGIEEDIAEERLQFWIGRNA--VAPT 529
E +F++A++L E EDV+FKQAWL+YFW RAK HG+E+DIAEER+Q WI R++ T
Sbjct: 470 ESRFIDAYELGEAEQEDVAFKQAWLMYFWGRAKLHGVEDDIAEERVQLWISRSSGKSQTT 529
Query: 530 SHDAIDVERGLTELRKLGIEQQLWEGSRADIDE-DSSAIENH 570
SHDA+DVERGL ELRKLGIEQQLWE SR +ID+ S NH
Sbjct: 530 SHDALDVERGLIELRKLGIEQQLWEASRREIDQLPSPTSSNH 571
>AT5G23700.1 | chr5:7992851-7996420 FORWARD LENGTH=574
Length = 573
Score = 429 bits (1102), Expect = e-120, Method: Compositional matrix adjust.
Identities = 248/489 (50%), Positives = 304/489 (62%), Gaps = 80/489 (16%)
Query: 124 LGRTARSPSPALGRNIVEPPPTVRSTSAGRPAVASRPTT-----------------TVVP 166
R RS SPA+GRNI E +VRS+S GRP+ SR +T ++P
Sbjct: 97 FARRNRSHSPAIGRNITEQVTSVRSSSTGRPSTFSRSSTPNASPLWMPPKASLKPPVIIP 156
Query: 167 PIKTSTTLRTXXXXXXXXXXXXXDRSRQKRFDTGHL-NSRESTPKREASALQDELDILQE 225
PI S DR ++ D L NSR+ +REASAL+DE+D+LQE
Sbjct: 157 PIDHS----------------FKDRDQRYFGDVPRLVNSRDKGYQREASALRDEVDMLQE 200
Query: 226 ENESVXXXXXXXXXXXXXXXXXXXXXXXQVAALGEGVSLEARLLSRKEAALKQREAALKA 285
ENE V QVA+LGEGVSLEA+LLSRKEAAL+QREAALKA
Sbjct: 201 ENEIVLEKLHRAEEMREAAEARARELEKQVASLGEGVSLEAKLLSRKEAALRQREAALKA 260
Query: 286 ARESKDGKDGEVTTLKHELDCAKEEVVTAMEQLKEAETETKALRSMTQRMILTQEEMEEV 345
A E KDGK EV +L+ E+ K+E TA E L+EAE+E KALR MTQRM+LTQ+EMEEV
Sbjct: 261 ANEKKDGKKEEVVSLRSEIQILKDEAETAAECLQEAESEAKALRIMTQRMVLTQDEMEEV 320
Query: 346 VLKRCWLSRYWGLAVQYGVYPEIAVSKHEHWSSLAPLPLEVVLSAGQKAKEEPLKQGEDD 405
LKRCWL+RYWGLAVQ+G+ +IA S+HE WS+LAPLP E+V+SA QK K++
Sbjct: 321 ALKRCWLARYWGLAVQHGICADIAPSRHEKWSALAPLPFELVISAAQKTKDD-------- 372
Query: 406 AQRRNKLVRDMSDVMGEGNIESMLSVEMGLRELSSLKVEDAVVVALGQHRRPSIVRQFTS 465
++K R +SD+ GEGNIESMLSVEMGLREL+SLKVEDAV++A Q R PS+VRQ
Sbjct: 373 ---QSKTARFLSDLPGEGNIESMLSVEMGLRELASLKVEDAVMLAFAQKRTPSLVRQ--- 426
Query: 466 DFKSPGEPKFLEAFD-----------------------LSH--------EEAEDVSFKQA 494
D K GE F+E++ LSH E EDV+FKQA
Sbjct: 427 DSKGHGELSFVESYGKRRESKHAQYIISAVKLDEILTMLSHFSNAEIKEGEQEDVAFKQA 486
Query: 495 WLIYFWRRAKTHGIEEDIAEERLQFWIGRN-AVAPTSHDAIDVERGLTELRKLGIEQQLW 553
WL+YFW RAK H +EEDIA+ER QFW R+ +PTS DA+DVERGL ELRKLG+EQQLW
Sbjct: 487 WLMYFWGRAKLHSVEEDIADERFQFWTSRSEGKSPTSQDAVDVERGLLELRKLGVEQQLW 546
Query: 554 EGSRADIDE 562
E R + D+
Sbjct: 547 EACRKETDQ 555
>AT5G13260.1 | chr5:4243164-4246677 FORWARD LENGTH=538
Length = 537
Score = 427 bits (1098), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/433 (52%), Positives = 299/433 (69%), Gaps = 7/433 (1%)
Query: 127 TARSPSPALGRNIVEPPPTVRSTS-AGRPAVASRPTTTVVPPIKTSTTLRTXXXXXXXXX 185
T P P +V PP RS+S A PAV+ R + VPP K LR
Sbjct: 109 TIAKPKPVASSAVVPPPKISRSSSPANSPAVSVRASQPPVPPSK----LRNQTTNPLPVA 164
Query: 186 XXXXDRSRQKRFDTGHLNSRESTPKREASALQDELDILQEENESVXXXXXXXXXXXXXXX 245
++ + D GH N ++S + EASAL+DELD+LQEEN+S+
Sbjct: 165 TPKTEK--RVLADIGHFNGKDSKDQHEASALRDELDMLQEENDSILEKLRLEDEKCKEAE 222
Query: 246 XXXXXXXXQVAALGEGVSLEARLLSRKEAALKQREAALKAARESKDGKDGEVTTLKHELD 305
QV +LGEGVSLEA+LLSRKEAAL+QREAALK AR+++DG + E T L+ +++
Sbjct: 223 ARVRELEKQVTSLGEGVSLEAKLLSRKEAALRQREAALKDARQNRDGTNRETTALRSQVE 282
Query: 306 CAKEEVVTAMEQLKEAETETKALRSMTQRMILTQEEMEEVVLKRCWLSRYWGLAVQYGVY 365
AK E + QL+ AE+E LR+MT RMILTQ+EMEEVVLKRCWL+RYWGLA +YG+
Sbjct: 283 TAKLETAAIVAQLQGAESEVNGLRTMTHRMILTQKEMEEVVLKRCWLARYWGLASRYGIC 342
Query: 366 PEIAVSKHEHWSSLAPLPLEVVLSAGQKAKEEPLKQGEDDAQRRNKLVRDMSDVMGEGNI 425
+IA SK+E+WSSLAPLP E+VLSAGQKAKEE ++ ++ ++R++LV+D++D+ GEGNI
Sbjct: 343 SDIATSKYEYWSSLAPLPFEIVLSAGQKAKEESWEKESEENEKRSQLVQDINDLTGEGNI 402
Query: 426 ESMLSVEMGLRELSSLKVEDAVVVALGQHRRPSIVRQFTSDFKSPGEPKFLEAFDLSHEE 485
ESMLSVEMGL+EL+SLKVE A+ + L Q R + R + KSPG PK E +LS EE
Sbjct: 403 ESMLSVEMGLKELTSLKVEVAITITLAQLRLANTTRLSDIELKSPGGPKITETLELSQEE 462
Query: 486 AEDVSFKQAWLIYFWRRAKTHGIEEDIAEERLQFWIGRNAVAPTSHDAIDVERGLTELRK 545
+EDV FK+AWL YFWRRA++ GIE D A ERL+FWI R+A +P+SHDA++VE+GLTELRK
Sbjct: 463 SEDVLFKEAWLTYFWRRAQSLGIEVDTARERLRFWISRSAHSPSSHDAMEVEQGLTELRK 522
Query: 546 LGIEQQLWEGSRA 558
L IE++LWE SR+
Sbjct: 523 LRIERRLWEASRS 535
>AT4G25070.2 | chr4:12872482-12876468 FORWARD LENGTH=768
Length = 767
Score = 400 bits (1029), Expect = e-112, Method: Compositional matrix adjust.
Identities = 198/358 (55%), Positives = 261/358 (72%), Gaps = 2/358 (0%)
Query: 203 NSRESTPKREASALQDELDILQEENESVXXXXXXXXXXXXXXXXXXXXXXXQVAALGEGV 262
NS + REASAL+DELD+LQEEN+++ QVA+LGEG
Sbjct: 395 NSNQQEDDREASALRDELDMLQEENDNIMDKLQRAEERREAAEARAKELEKQVASLGEGA 454
Query: 263 SLEARLLSRKEAALKQREAALKAARESKDGKDGEVTTLKHELDCAKEEVVTAMEQLKEAE 322
+ + +LL RKEAAL+QREAAL+AA + +DG++ E L E K+E + EQL+E E
Sbjct: 455 NFDVKLLKRKEAALRQREAALRAAEQKRDGRNRETNALSSEFQSLKDEAEKSTEQLQEVE 514
Query: 323 TETKALRSMTQRMILTQEEMEEVVLKRCWLSRYWGLAVQYGVYPEIAVSKHEHWSSLAPL 382
E K+LR+M R IL+QEEMEEVVLKRCWL+RYW LAVQ+G+ +I+ S++EHWS+LAPL
Sbjct: 515 AEIKSLRTMIHRTILSQEEMEEVVLKRCWLARYWELAVQHGICEDISTSRYEHWSALAPL 574
Query: 383 PLEVVLSAGQKAKEEPLKQGEDDAQRRNKLVRDMSDVMGEGNIESMLSVEMGLRELSSLK 442
P EVVLSA QK+++ G D + +K++ + SD+ GEGNIESML+VE GLRE++SLK
Sbjct: 575 PSEVVLSAAQKSEDSWQTGGSD--RTWSKVISNFSDLNGEGNIESMLAVETGLREIASLK 632
Query: 443 VEDAVVVALGQHRRPSIVRQFTSDFKSPGEPKFLEAFDLSHEEAEDVSFKQAWLIYFWRR 502
VEDAV++AL ++R+ ++ RQ +D + GEPKF E F+LSH+E +D+ FK+AWL+YFW+R
Sbjct: 633 VEDAVMLALSRYRQTNVARQAVTDPRVQGEPKFSETFELSHDEQQDILFKEAWLLYFWKR 692
Query: 503 AKTHGIEEDIAEERLQFWIGRNAVAPTSHDAIDVERGLTELRKLGIEQQLWEGSRADI 560
AK HG+E DIAEERLQFWI R +SHDAIDVERG+ ELRKLGIEQQLWE SR ++
Sbjct: 693 AKIHGVESDIAEERLQFWINRLGQHSSSHDAIDVERGMRELRKLGIEQQLWETSRKEL 750
>AT4G08630.1 | chr4:5506998-5511959 REVERSE LENGTH=846
Length = 845
Score = 318 bits (814), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 196/484 (40%), Positives = 264/484 (54%), Gaps = 81/484 (16%)
Query: 143 PPTVRSTSAGRPAVASRPTTTVVPPIKTSTTLRTXXXXXXXXXXXXXDRSRQKRF--DTG 200
PP+ RS+ GRP P + +S + + + KRF D G
Sbjct: 374 PPSARSSFNGRP-------IRTAPLMPSSVPISLKPVTPAFQSNTPTNLRKDKRFSMDLG 426
Query: 201 HL-NSRESTPKREASALQDELDILQEENESVXXXXXXXXXXXXXXXXXXXXXXXQVAALG 259
N RE +R SALQDE+D+LQEENES+ QV LG
Sbjct: 427 SSGNLRELGSQRSTSALQDEVDMLQEENESLLEKLRLAEDKCEEADARAKQLEKQVEILG 486
Query: 260 EGVSLEARLLSRKEAALKQREAALKAARESKDGKDGEVTTLKHEL-DCA-----KEEVVT 313
EGV+++ARLLSR+ + L K G TT + +C KE +
Sbjct: 487 EGVTMDARLLSRQASVLFNF------------WKRGSSTTERGCFENCITKSWRKEGRSS 534
Query: 314 AMEQLKEAETETKALRSMTQRMILTQEEMEEVVLKRCWLSRYWGLAVQYGVYPEIAVSKH 373
+++QL E E E +L+++T+R+ILTQEEMEEVVLKRCWLSRYWGL V++G+ P+IA KH
Sbjct: 535 SLDQLHEVELELNSLKTVTKRLILTQEEMEEVVLKRCWLSRYWGLCVRHGIQPDIAGGKH 594
Query: 374 EHWSSLAPLPLEVVLSAGQKAKE-------------------------------EPLKQG 402
E+WSS APLPLE+VLSAGQ+A++ P +
Sbjct: 595 EYWSSFAPLPLEIVLSAGQRARDGVSQCNIFHLAAEISLELFGIVLTSLVLTLWSPHQAA 654
Query: 403 EDDAQRRNKLVRDMSDVMGEGNIESMLSVEMGLRELSSLK-------------------- 442
+ R K ++++ + GEGN+E+M+ VE GLREL+SLK
Sbjct: 655 NNTYGEREKSLQNLQETSGEGNLENMIWVEKGLRELASLKNQSSVIQETDLKYDSLRCLK 714
Query: 443 VEDAVVVALGQHRRPSIVRQFTSD-FKSPGEPKFLEAFDLSHEEAEDVSFKQAWLIYFWR 501
V++AV + Q+RR + + F SD K P + +F EAF+LS EE EDV+FKQAWL YFWR
Sbjct: 715 VQEAVAFVMAQNRRNTSSKFFVSDEVKMPMDGQF-EAFELSDEEVEDVNFKQAWLSYFWR 773
Query: 502 RAKTHGIEEDIAEERLQFWIGRNAVAPTSHDAIDVERGLTELRKLGIEQQLWEGSRADID 561
RAK H IE D+ +ERLQ+WI + + TS DA+DVERGL ELRKL IE QLW+ SR +D
Sbjct: 774 RAKNHEIESDLVDERLQYWINQGTRSATSQDAVDVERGLMELRKLNIESQLWQKSRKGLD 833
Query: 562 EDSS 565
+S+
Sbjct: 834 HESN 837
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.312 0.128 0.359
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,905,715
Number of extensions: 339743
Number of successful extensions: 1513
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 1477
Number of HSP's successfully gapped: 5
Length of query: 570
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 466
Effective length of database: 8,255,305
Effective search space: 3846972130
Effective search space used: 3846972130
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 114 (48.5 bits)