Os01g0926700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0926700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 275.83 | 0.78 | 6.98 | -1.1 | 0.328 | 0.875 | 0.383 | -2.73 | 0.157 | 2.88 | 3.1 | 4158 | 8.02 | 0.946 |
| 291.34 | 0.795 | 6.98 | -1.23 | 0.307 | 1.05 | 0.394 | -- | 0.157 | 2.84 | 3.1 | 4172 | 8.03 | 0.983 |
| 275.91 | 0.774 | 6.98 | -1.1 | 0.333 | 0.89 | -- | -2.7 | 0.158 | 2.52 | 3.151 | 4156 | 8.05 | 0.867 |
| 291.47 | 0.795 | 6.99 | -1.1 | 0.307 | 1.11 | -- | -- | 0.17 | 2.68 | 3.116 | 4172 | 8.03 | 0.869 |
| 282.16 | 0.782 | 6.98 | -1.1 | -- | 0.911 | -- | -2.63 | 0.157 | -- | 3.157 | 4166 | 8.06 | 0.85 |
| 319.98 | 0.839 | 7.06 | -1.45 | 0.336 | -- | 0.312 | -- | -0.135 | 2.23 | -- | -- | -- | -- |
| 320.25 | 0.838 | 7.07 | -1.46 | 0.336 | -- | -- | -- | -0.137 | 1.75 | -- | -- | -- | -- |
| 296.57 | 0.802 | 6.99 | -1.11 | -- | 1.1 | -- | -- | 0.168 | -- | 3.1 | 4177 | 8.03 | 0.867 |
| 317.96 | 0.83 | 6.98 | -- | 0.35 | 1.6 | -- | -- | 0.29 | 2.69 | 3.804 | 5770 | 8.08 | 0.967 |
| 327.11 | 0.845 | 7.06 | -1.44 | -- | -- | -- | -- | -0.129 | -- | -- | -- | -- | -- |
| 376.1 | 0.907 | 7.03 | -- | 0.31 | -- | -- | -- | 0.0255 | 1.61 | -- | -- | -- | -- |
| 321.38 | 0.835 | 6.92 | -- | -- | 1.35 | -- | -- | 0.429 | -- | 3.991 | 4178 | 7.98 | 0.933 |
| 381.96 | 0.912 | 7.03 | -- | -- | -- | -- | -- | 0.0309 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 276.72 | wind | 1.0 | 14400 | > th | dose independent | rect. | 24 | 3 |
| 2 | 277.33 | wind | 1.0 | 14400 | < th | dose independent | rect. | 24 | 3 |
| 3 | 278.88 | wind | 3.0 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 6 | 280.39 | wind | 3.0 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 14 | 284.04 | wind | 3.0 | 4320 | < th | dose independent | rect. | 5 | 4 |
| 20 | 285.06 | wind | 3.0 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 25 | 285.56 | radiation | 40.0 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 41 | 285.56 | radiation | 40.0 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 61 | 286.45 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 16 | 1 |
| 69 | 286.94 | wind | 3.0 | 1440 | < th | dose dependent | rect. | 6 | 4 |
| 70 | 287.08 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 81 | 287.68 | wind | 1.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 91 | 287.96 | wind | 3.0 | 4320 | > th | dose independent | rect. | 2 | 8 |
| 97 | 288.36 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 22 | 2 |
| 105 | 288.77 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 6 | 3 |
| 116 | 289.19 | wind | 1.0 | 4320 | > th | dose dependent | rect. | 6 | 3 |
| 121 | 289.54 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 21 | 13 |
| 126 | 289.59 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 21 | 13 |
| 129 | 289.60 | atmosphere | 995.0 | 43200 | < th | dose independent | sin | 9 | NA |
| 130 | 289.64 | atmosphere | 995.0 | 43200 | > th | dose independent | sin | 8 | NA |
| 132 | 289.65 | atmosphere | 995.0 | 43200 | < th | dose dependent | sin | 11 | NA |
| 138 | 289.81 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 2 |
| 146 | 289.92 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 2 |
| 157 | 290.11 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 22 | 2 |
| 172 | 290.45 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 13 | 19 |
| 174 | 290.50 | wind | 3.0 | 4320 | < th | dose independent | rect. | 21 | 13 |
| 175 | 290.52 | wind | 1.0 | 14400 | < th | dose independent | rect. | 13 | 15 |
| 179 | 290.59 | wind | 1.0 | 14400 | > th | dose independent | rect. | 13 | 20 |
| 181 | 290.64 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 182 | 290.66 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 23 | 10 |
| 190 | 290.78 | wind | 1.0 | 14400 | > th | dose independent | rect. | 13 | 15 |
| 191 | 290.79 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 1 | 8 |
| 199 | 290.82 | wind | 3.0 | 4320 | > th | dose independent | rect. | 21 | 13 |
| 204 | 290.90 | wind | 1.0 | 14400 | < th | dose independent | rect. | 13 | 20 |
| 215 | 291.02 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 3 | 5 |
| 225 | 291.14 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 3 | 5 |
| 227 | 291.14 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 17 | 16 |
| 242 | 291.31 | wind | 1.0 | 14400 | < th | dose independent | sin | 13 | NA |
| 246 | 291.38 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 21 | 12 |
| 288 | 291.70 | wind | 1.0 | 14400 | > th | dose independent | sin | 13 | NA |
| 321 | 292.06 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 22 | 5 |
| 324 | 292.08 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 3 | 2 |
| 341 | 292.17 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 6 | 22 |
| 357 | 292.26 | temperature | 15.0 | 4320 | < th | dose independent | rect. | 4 | 1 |
| 429 | 292.69 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 1 | 23 |
| 434 | 292.74 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 12 | 2 |
| 439 | 292.80 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 15 | 1 |
| 449 | 292.92 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 22 | 12 |
| 463 | 293.00 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 1 | 2 |
| 530 | 293.43 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 22 | 20 |
| 531 | 293.44 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 544 | 293.51 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 22 | 22 |
| 548 | 293.54 | wind | 3.0 | 4320 | < th | dose independent | sin | 7 | NA |
| 557 | 293.59 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 12 | 6 |
| 570 | 293.64 | wind | 3.0 | 14400 | < th | dose dependent | sin | 12 | NA |
| 572 | 293.64 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 1 | 19 |
| 614 | 293.68 | wind | 9.0 | 14400 | > th | dose independent | rect. | 23 | 2 |
| 635 | 293.78 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 12 | 4 |
| 682 | 293.83 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 708 | 293.93 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 1 | 17 |
| 722 | 293.99 | wind | 1.0 | 14400 | < th | dose independent | rect. | 5 | 23 |
| 789 | 294.25 | wind | 1.0 | 14400 | < th | dose dependent | no | NA | NA |
| 799 | 294.27 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 16 | 23 |
| 807 | 294.30 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 809 | 294.30 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 843 | 294.38 | humidity | 90.0 | 720 | > th | dose independent | rect. | 5 | 1 |
| 848 | 294.40 | wind | 3.0 | 4320 | > th | dose independent | sin | 7 | NA |
| 938 | 294.67 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 17 |
| 955 | 294.70 | wind | 1.0 | 14400 | < th | dose independent | rect. | 22 | 20 |
| 961 | 294.71 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 16 | 12 |