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Os01g0918500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11 (0.0157) R2 : 0.0506
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.163 (0.033) R2dN8 : 0.0653 R2N8 : 0.0506
σ : 0.295
deviance : 39.94
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
14.79 0.181 11 0.714 0.456 -0.589 0.0677 -1.87 0.243 2.85 20 4549 -- --
16.24 0.188 11 0.625 0.458 -0.0592 0.0819 -- 0.212 2.89 31.4 3033 -- --
14.8 0.179 11 0.709 0.456 -0.623 -- -1.95 0.243 2.84 19.82 4533 -- --
15.88 0.186 11 0.478 0.461 -0.185 -- -- 0.152 2.79 128.1 31955 -- --
26.65 0.24 11 0.734 -- -0.567 -- -1.74 0.248 -- 20.37 3948 -- --
16.31 0.189 11 0.643 0.457 -- 0.0838 -- 0.225 2.85 -- -- -- --
16.33 0.189 11 0.641 0.457 -- -- -- 0.224 2.84 -- -- -- --
24.81 0.233 11 0.752 -- 0.5 -- -- 0.302 -- 221.7 32783 -- --
17.06 0.192 11.1 -- 0.449 -0.512 -- -- -7.7e-05 2.89 135.5 47520 -- --
28.42 0.249 11 0.661 -- -- -- -- 0.236 -- -- -- -- --
27.17 0.244 11 -- 0.47 -- -- -- 0.153 2.86 -- -- -- --
28.65 0.249 11.1 -- -- -0.54 -- -- 0.000889 -- 134 47520 -- --
39.94 0.295 11 -- -- -- -- -- 0.163 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 13.99 wind 9 4320 > th dose independent rect. 15 1
2 14.13 wind 9 4320 > th dose dependent rect. 13 3
3 14.15 wind 9 4320 > th dose dependent rect. 13 1
4 14.16 temperature 20 720 > th dose independent rect. 5 2
9 14.19 wind 7 4320 > th dose dependent rect. 15 1
10 14.20 wind 9 4320 > th dose independent rect. 13 1
11 14.20 wind 9 4320 > th dose independent rect. 13 3
12 14.22 wind 9 4320 < th dose independent rect. 13 1
15 14.24 wind 9 4320 < th dose independent rect. 15 1
19 14.31 wind 9 4320 < th dose independent rect. 13 3
38 14.43 wind 9 4320 > th dose dependent rect. 13 8
44 14.46 wind 9 4320 > th dose dependent rect. 13 11
54 14.50 radiation 1 4320 > th dose independent rect. 14 2
57 14.51 radiation 1 720 > th dose independent rect. 18 1
59 14.51 humidity 70 43200 < th dose independent rect. 7 2
61 14.51 radiation 1 4320 < th dose independent rect. 14 2
82 14.54 wind 7 14400 < th dose independent rect. 23 12
83 14.54 humidity 50 43200 < th dose dependent rect. 14 1
84 14.54 temperature 15 720 > th dose dependent rect. 5 2
108 14.57 wind 9 4320 > th dose independent rect. 13 11
109 14.57 temperature 20 720 > th dose independent rect. 2 11
114 14.57 humidity 70 43200 < th dose dependent rect. 8 1
115 14.57 humidity 60 43200 < th dose dependent rect. 11 1
129 14.58 humidity 50 43200 > th dose independent rect. 10 8
137 14.58 wind 7 14400 > th dose independent rect. 24 11
180 14.60 humidity 50 43200 > th dose independent sin 21 NA
184 14.60 humidity 50 43200 > th dose independent rect. 10 2
186 14.60 wind 9 4320 < th dose independent rect. 13 7
231 14.61 wind 9 4320 < th dose independent rect. 13 11
234 14.61 humidity 50 43200 < th dose independent rect. 10 11
288 14.62 humidity 50 43200 > th dose independent no NA NA
289 14.62 humidity 60 43200 > th dose independent rect. 8 1
296 14.62 humidity 50 43200 < th dose independent rect. 10 8
384 14.62 humidity 50 43200 > th dose independent rect. 17 23
403 14.63 humidity 50 43200 < th dose independent sin 20 NA
407 14.63 humidity 50 43200 < th dose independent rect. 10 2
465 14.63 wind 7 14400 > th dose dependent rect. 7 3
578 14.65 temperature 20 720 > th dose independent sin 5 NA
582 14.65 humidity 50 43200 < th dose independent no NA NA
584 14.65 atmosphere 1015 43200 < th dose independent rect. 23 1
657 14.65 humidity 50 43200 < th dose independent rect. 13 23
658 14.65 humidity 50 43200 < th dose independent rect. 16 23
696 14.66 atmosphere 1015 43200 > th dose independent rect. 23 1
700 14.66 humidity 50 43200 > th dose independent rect. 13 3
773 14.67 humidity 60 43200 > th dose independent rect. 1 8
807 14.67 wind 9 4320 > th dose dependent rect. 23 17
826 14.68 humidity 50 43200 < th dose independent rect. 13 4
875 14.68 humidity 50 43200 < th dose dependent sin 17 NA
881 14.68 wind 7 14400 > th dose dependent rect. 5 5
889 14.68 wind 9 4320 > th dose dependent rect. 3 13
907 14.69 wind 1 43200 > th dose independent rect. 9 1
908 14.69 wind 1 14400 > th dose independent rect. 23 2
959 14.69 atmosphere 1015 43200 > th dose dependent rect. 23 1
966 14.69 atmosphere 1015 43200 > th dose dependent rect. 21 8
979 14.70 wind 7 14400 > th dose independent rect. 24 3
989 14.70 wind 7 14400 < th dose independent rect. 4 6