Os01g0917300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0917300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 143.99 | 0.564 | 8.89 | 0.453 | 1.68 | -5.22 | -3.04 | -1.86 | -0.556 | 17 | 31.43 | 223 | 21 | -- |
| 144.43 | 0.56 | 8.89 | 0.314 | 1.88 | -5.61 | -3.1 | -- | -0.538 | 16.1 | 33.43 | 186 | 20.4 | -- |
| 166.61 | 0.601 | 8.9 | 0.42 | 1.75 | -5.27 | -- | -1.43 | -0.549 | 16.6 | 32.39 | 221 | 20.9 | -- |
| 168.15 | 0.604 | 8.9 | 0.299 | 1.17 | -5.18 | -- | -- | -0.594 | 15.9 | 33.1 | 246 | 22.1 | -- |
| 172.87 | 0.612 | 8.92 | 0.235 | -- | -5.08 | -- | 0.435 | -0.653 | -- | 33.03 | 258 | 23.9 | -- |
| 320.43 | 0.839 | 8.87 | 0.959 | 3.27 | -- | -1.55 | -- | -0.116 | 19.4 | -- | -- | -- | -- |
| 326.88 | 0.847 | 8.87 | 0.992 | 3.26 | -- | -- | -- | -0.12 | 19.5 | -- | -- | -- | -- |
| 173.14 | 0.613 | 8.9 | 0.311 | -- | -5.08 | -- | -- | -0.659 | -- | 33.11 | 257 | 23.8 | -- |
| 170.28 | 0.608 | 8.91 | -- | 1.17 | -5.41 | -- | -- | -0.623 | 15.3 | 33.4 | 234 | 22 | -- |
| 894.93 | 1.4 | 8.79 | 0.942 | -- | -- | -- | -- | -0.172 | -- | -- | -- | -- | -- |
| 352.84 | 0.879 | 8.9 | -- | 3.25 | -- | -- | -- | -0.231 | 19.5 | -- | -- | -- | -- |
| 175.52 | 0.617 | 8.92 | -- | -- | -5.17 | -- | -- | -0.71 | -- | 32.81 | 264 | 23.9 | -- |
| 918.36 | 1.41 | 8.82 | -- | -- | -- | -- | -- | -0.276 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 144.46 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 16 |
| 4 | 148.59 | temperature | 30 | 270 | < th | dose dependent | sin | 3 | NA |
| 6 | 149.91 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 20 |
| 14 | 153.02 | temperature | 30 | 90 | < th | dose dependent | sin | 0 | NA |
| 37 | 161.91 | temperature | 20 | 270 | > th | dose dependent | rect. | 22 | 16 |
| 51 | 165.35 | temperature | 10 | 270 | > th | dose dependent | sin | 4 | NA |
| 52 | 165.61 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 22 |
| 72 | 168.31 | temperature | 10 | 90 | > th | dose dependent | sin | 1 | NA |
| 92 | 170.81 | temperature | 25 | 270 | < th | dose independent | rect. | 3 | 17 |
| 97 | 171.39 | temperature | 10 | 10 | > th | dose dependent | sin | 23 | NA |
| 172 | 177.76 | temperature | 25 | 270 | < th | dose independent | sin | 2 | NA |
| 183 | 178.51 | temperature | 30 | 10 | < th | dose dependent | rect. | 6 | 17 |
| 248 | 182.91 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 21 |
| 268 | 184.19 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 22 |
| 269 | 184.26 | temperature | 20 | 90 | > th | dose dependent | rect. | 21 | 23 |
| 275 | 184.54 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 318 | 186.31 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 21 |
| 331 | 186.88 | temperature | 20 | 90 | > th | dose dependent | rect. | 8 | 23 |
| 334 | 187.05 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 353 | 188.34 | temperature | 25 | 270 | > th | dose independent | rect. | 23 | 16 |
| 366 | 188.85 | temperature | 30 | 270 | < th | dose dependent | rect. | 13 | 23 |
| 371 | 189.08 | temperature | 25 | 270 | > th | dose independent | rect. | 22 | 18 |
| 379 | 189.29 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 389 | 189.70 | temperature | 15 | 270 | > th | dose dependent | rect. | 7 | 9 |
| 402 | 190.43 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 15 |
| 419 | 190.93 | temperature | 20 | 90 | > th | dose dependent | no | NA | NA |
| 426 | 191.11 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 608 | 195.78 | temperature | 25 | 270 | > th | dose independent | sin | 3 | NA |
| 690 | 197.54 | temperature | 20 | 90 | > th | dose dependent | rect. | 1 | 23 |
| 855 | 200.67 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 934 | 201.94 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 11 |
| 971 | 202.50 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |