Os01g0917100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0917100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 284.49 | 0.792 | 2.95 | -0.0847 | 0.269 | 0.62 | -0.064 | 1.57 | -0.05 | 8.55 | 20.02 | 164 | -- | -- |
| 292.62 | 0.797 | 2.92 | 0.155 | 0.297 | 0.462 | 0.00672 | -- | 0.0302 | 8.83 | 20.89 | 182 | -- | -- |
| 284.51 | 0.786 | 2.95 | -0.086 | 0.268 | 0.622 | -- | 1.57 | -0.0499 | 8.64 | 20.02 | 163 | -- | -- |
| 292.46 | 0.796 | 2.92 | 0.134 | 0.284 | 0.447 | -- | -- | 0.0177 | 8.54 | 20.9 | 161 | -- | -- |
| 288.54 | 0.791 | 2.96 | -0.0939 | -- | 0.611 | -- | 1.6 | -0.051 | -- | 20.1 | 164 | -- | -- |
| 300.85 | 0.813 | 2.94 | 0.00561 | 0.298 | -- | 0.0663 | -- | -0.0805 | 7.05 | -- | -- | -- | -- |
| 300.86 | 0.812 | 2.94 | 0.00699 | 0.298 | -- | -- | -- | -0.0806 | 7.08 | -- | -- | -- | -- |
| 295.82 | 0.801 | 2.92 | 0.161 | -- | 0.49 | -- | -- | 0.0375 | -- | 20.9 | 286 | -- | -- |
| 292.9 | 0.797 | 2.92 | -- | 0.288 | 0.43 | -- | -- | -0.00191 | 8.37 | 20.86 | 161 | -- | -- |
| 305.55 | 0.817 | 2.95 | 0.0128 | -- | -- | -- | -- | -0.0752 | -- | -- | -- | -- | -- |
| 300.86 | 0.811 | 2.94 | -- | 0.298 | -- | -- | -- | -0.0814 | 7.08 | -- | -- | -- | -- |
| 296.52 | 0.802 | 2.93 | -- | -- | 0.456 | -- | -- | 0.00981 | -- | 20.9 | 285 | -- | -- |
| 305.55 | 0.816 | 2.95 | -- | -- | -- | -- | -- | -0.0767 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 267.62 | temperature | 20.0 | 90 | < th | dose independent | rect. | 8 | 11 |
| 4 | 269.11 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 9 | 11 |
| 5 | 269.20 | wind | 5.0 | 10 | > th | dose dependent | rect. | 20 | 1 |
| 7 | 269.21 | wind | 5.0 | 10 | > th | dose independent | rect. | 20 | 1 |
| 29 | 269.93 | temperature | 20.0 | 90 | < th | dose independent | rect. | 14 | 5 |
| 34 | 270.06 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 12 | 7 |
| 35 | 270.07 | temperature | 20.0 | 90 | < th | dose independent | rect. | 17 | 2 |
| 36 | 270.07 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 17 | 2 |
| 40 | 270.09 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 14 | 5 |
| 86 | 270.74 | temperature | 20.0 | 90 | < th | dose independent | rect. | 1 | 19 |
| 110 | 272.44 | temperature | 20.0 | 90 | < th | dose independent | rect. | 3 | 17 |
| 156 | 273.85 | wind | 5.0 | 90 | > th | dose dependent | rect. | 18 | 2 |
| 164 | 274.84 | temperature | 20.0 | 90 | < th | dose independent | rect. | 5 | 15 |
| 177 | 276.09 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 9 | 1 |
| 221 | 278.16 | temperature | 20.0 | 90 | < th | dose independent | sin | 23 | NA |
| 243 | 279.47 | temperature | 20.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 244 | 279.63 | temperature | 20.0 | 90 | > th | dose independent | sin | 23 | NA |
| 250 | 279.83 | wind | 5.0 | 90 | > th | dose independent | rect. | 18 | 1 |
| 269 | 280.99 | humidity | 90.0 | 270 | < th | dose independent | rect. | 6 | 1 |
| 272 | 281.19 | temperature | 20.0 | 90 | < th | dose independent | rect. | 1 | 5 |
| 280 | 281.41 | humidity | 80.0 | 10 | < th | dose independent | rect. | 9 | 1 |
| 287 | 281.75 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 6 | 15 |
| 334 | 284.02 | temperature | 20.0 | 90 | < th | dose independent | rect. | 24 | 10 |
| 337 | 284.11 | wind | 5.0 | 30 | < th | dose independent | rect. | 9 | 1 |
| 341 | 284.17 | temperature | 20.0 | 90 | < th | dose independent | rect. | 16 | 14 |
| 343 | 284.18 | temperature | 20.0 | 90 | < th | dose independent | rect. | 24 | 16 |
| 346 | 284.19 | temperature | 20.0 | 90 | < th | dose independent | rect. | 10 | 20 |
| 359 | 284.37 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 363 | 284.41 | temperature | 20.0 | 10 | < th | dose independent | rect. | 4 | 2 |
| 367 | 284.45 | atmosphere | 1000.0 | 10 | > th | dose dependent | rect. | 9 | 1 |
| 371 | 284.46 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 1 | 19 |
| 380 | 284.55 | wind | 7.0 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 420 | 285.07 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 3 | 17 |
| 456 | 285.47 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 463 | 285.57 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 19 | 1 |
| 546 | 285.95 | temperature | 20.0 | 90 | > th | dose independent | rect. | 9 | 22 |
| 591 | 286.18 | humidity | 90.0 | 90 | < th | dose independent | rect. | 2 | 8 |
| 627 | 286.41 | temperature | 20.0 | 90 | < th | dose independent | rect. | 17 | 21 |
| 644 | 286.47 | humidity | 80.0 | 10 | < th | dose independent | rect. | 3 | 7 |
| 654 | 286.50 | wind | 1.0 | 10 | < th | dose dependent | rect. | 8 | 1 |
| 656 | 286.50 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 1 |
| 658 | 286.52 | temperature | 20.0 | 90 | < th | dose independent | no | NA | NA |
| 660 | 286.52 | temperature | 20.0 | 90 | < th | dose independent | rect. | 13 | 23 |
| 696 | 286.62 | temperature | 20.0 | 90 | > th | dose independent | rect. | 24 | 17 |
| 723 | 286.75 | radiation | 20.0 | 90 | < th | dose independent | rect. | 9 | 1 |
| 738 | 286.86 | temperature | 20.0 | 90 | > th | dose independent | rect. | 24 | 15 |
| 742 | 286.87 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 754 | 286.94 | wind | 7.0 | 10 | < th | dose independent | sin | 11 | NA |
| 760 | 286.99 | temperature | 20.0 | 90 | > th | dose independent | rect. | 21 | 23 |
| 768 | 287.04 | temperature | 20.0 | 90 | > th | dose independent | rect. | 23 | 23 |
| 785 | 287.11 | temperature | 20.0 | 90 | < th | dose independent | rect. | 3 | 23 |
| 789 | 287.14 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 5 | 1 |
| 790 | 287.16 | temperature | 20.0 | 90 | > th | dose independent | no | NA | NA |
| 792 | 287.17 | temperature | 20.0 | 90 | < th | dose independent | rect. | 3 | 13 |
| 804 | 287.22 | temperature | 20.0 | 90 | < th | dose independent | rect. | 3 | 11 |
| 844 | 287.35 | temperature | 20.0 | 270 | > th | dose independent | rect. | 18 | 22 |
| 875 | 287.49 | temperature | 20.0 | 90 | < th | dose independent | rect. | 8 | 1 |
| 888 | 287.54 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 8 | 1 |
| 891 | 287.55 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 1 |
| 894 | 287.55 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 1 |
| 898 | 287.56 | temperature | 20.0 | 10 | > th | dose independent | rect. | 24 | 16 |
| 915 | 287.64 | temperature | 20.0 | 10 | < th | dose independent | rect. | 8 | 2 |
| 922 | 287.64 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 8 | 2 |
| 933 | 287.67 | wind | 1.0 | 720 | < th | dose dependent | rect. | 21 | 2 |
| 949 | 287.74 | temperature | 15.0 | 720 | < th | dose independent | rect. | 23 | 1 |
| 962 | 287.74 | temperature | 15.0 | 720 | < th | dose dependent | rect. | 23 | 1 |
| 997 | 287.85 | wind | 1.0 | 270 | < th | dose dependent | rect. | 4 | 1 |