Os01g0911800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Heavy meromyosin-like protein (Fragment).
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Os01g0911800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Heavy meromyosin-like protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 13.28 | 0.171 | 10.3 | -0.604 | 0.68 | -0.664 | -0.0295 | -0.0658 | 0.151 | 4.22 | 23.73 | 11 | -- | -- |
| 13.24 | 0.171 | 10.3 | -0.611 | 0.678 | -0.668 | -0.0463 | -- | 0.152 | 4.21 | 23.51 | 9 | -- | -- |
| 13.23 | 0.171 | 10.3 | -0.598 | 0.679 | -0.683 | -- | -0.108 | 0.155 | 4.21 | 23.44 | 8 | -- | -- |
| 13.25 | 0.171 | 10.3 | -0.611 | 0.678 | -0.667 | -- | -- | 0.152 | 4.21 | 23.51 | 9 | -- | -- |
| 36.91 | 0.285 | 10.3 | -0.544 | -- | -0.379 | -- | 0.154 | 0.206 | -- | 23.44 | 8 | -- | -- |
| 19.14 | 0.205 | 10.2 | -0.468 | 0.616 | -- | -0.0244 | -- | 0.249 | 4.73 | -- | -- | -- | -- |
| 19.14 | 0.205 | 10.2 | -0.468 | 0.616 | -- | -- | -- | 0.249 | 4.73 | -- | -- | -- | -- |
| 36.9 | 0.284 | 10.3 | -0.526 | -- | -0.411 | -- | -- | 0.211 | -- | 23.1 | 4 | -- | -- |
| 22.25 | 0.221 | 10.2 | -- | 0.643 | -0.439 | -- | -- | 0.251 | 4.41 | 23.2 | 14 | -- | -- |
| 39.26 | 0.293 | 10.2 | -0.445 | -- | -- | -- | -- | 0.265 | -- | -- | -- | -- | -- |
| 24.91 | 0.233 | 10.2 | -- | 0.607 | -- | -- | -- | 0.301 | 4.75 | -- | -- | -- | -- |
| 43.7 | 0.309 | 10.2 | -- | -- | -0.227 | -- | -- | 0.29 | -- | 23.1 | 4 | -- | -- |
| 44.47 | 0.311 | 10.2 | -- | -- | -- | -- | -- | 0.314 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 12.13 | temperature | 25 | 270 | < th | dose dependent | rect. | 11 | 15 |
| 2 | 12.16 | temperature | 25 | 270 | < th | dose dependent | rect. | 13 | 13 |
| 3 | 12.17 | temperature | 25 | 270 | < th | dose dependent | sin | 16 | NA |
| 12 | 12.30 | temperature | 25 | 10 | < th | dose dependent | sin | 14 | NA |
| 39 | 12.50 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 16 |
| 51 | 12.61 | temperature | 25 | 10 | < th | dose dependent | rect. | 16 | 12 |
| 81 | 12.77 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 6 |
| 198 | 13.13 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 199 | 13.15 | temperature | 15 | 10 | > th | dose dependent | sin | 12 | NA |
| 215 | 13.17 | temperature | 25 | 10 | < th | dose dependent | rect. | 9 | 19 |
| 220 | 13.19 | temperature | 20 | 30 | > th | dose independent | sin | 14 | NA |
| 262 | 13.25 | temperature | 25 | 90 | < th | dose dependent | rect. | 13 | 22 |
| 287 | 13.30 | temperature | 25 | 10 | < th | dose dependent | rect. | 16 | 18 |
| 293 | 13.31 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 12 |
| 315 | 13.33 | temperature | 25 | 90 | < th | dose dependent | rect. | 15 | 20 |
| 385 | 13.42 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 2 |
| 396 | 13.42 | temperature | 25 | 10 | < th | dose dependent | rect. | 6 | 22 |
| 406 | 13.44 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 5 |
| 417 | 13.45 | temperature | 30 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 421 | 13.45 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 5 |
| 563 | 13.54 | temperature | 25 | 90 | < th | dose dependent | rect. | 5 | 23 |
| 657 | 13.59 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 660 | 13.60 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 680 | 13.60 | temperature | 25 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 718 | 13.62 | temperature | 25 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 740 | 13.63 | temperature | 25 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 741 | 13.64 | temperature | 20 | 30 | > th | dose independent | rect. | 18 | 12 |
| 742 | 13.64 | temperature | 20 | 30 | > th | dose independent | rect. | 13 | 17 |
| 818 | 13.67 | temperature | 20 | 30 | < th | dose independent | sin | 14 | NA |
| 862 | 13.68 | temperature | 25 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 917 | 13.71 | temperature | 10 | 1440 | > th | dose dependent | sin | 12 | NA |