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Os01g0908200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : BTB domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.9 (0.0288) R2 : 0.769
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.7 (0.0696) R2dC : 0.764 R2C : 0.764
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.156 (0.0607) R2dN8 : 0.00432 R2N8 : 0.00501
σ : 0.544
deviance : 135.26
__
_____
C
peak time of C : 13.6
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
107.54 0.487 13 -0.675 1.47 -1.08 -0.294 -0.807 -0.304 14.2 0.6298 114 -- --
108.32 0.485 13 -0.717 1.45 -1.09 0.599 -- -0.319 14.2 0.8193 118 -- --
107.6 0.483 13 -0.688 1.47 -1.08 -- -0.593 -0.307 14.2 0.7198 114 -- --
109.66 0.488 13 -0.695 1.47 -1.09 -- -- -0.312 14.3 0.8 114 -- --
127.3 0.525 13 -0.763 -- -2.13 -- -0.521 -0.329 -- 0.8227 150 -- --
122.78 0.519 12.9 -0.647 2.69 -- 0.754 -- -0.229 13.6 -- -- -- --
125.05 0.524 12.9 -0.622 2.69 -- -- -- -0.225 13.6 -- -- -- --
129.17 0.529 13 -0.8 -- -2.14 -- -- -0.342 -- 0.8729 157 -- --
122.54 0.516 13 -- 1.5 -1.08 -- -- -0.269 14.3 1.241 109 -- --
567.66 1.11 13 -0.73 -- -- -- -- -0.284 -- -- -- -- --
135.26 0.544 12.9 -- 2.7 -- -- -- -0.156 13.6 -- -- -- --
145.98 0.563 13 -- -- -2.15 -- -- -0.265 -- 1.23 160 -- --
581.72 1.13 12.9 -- -- -- -- -- -0.203 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 99.79 precipitation 0.1 90 < th dose independent rect. 22 10
2 99.79 precipitation 0.1 90 < th dose dependent rect. 22 10
3 100.15 temperature 15.0 90 > th dose independent rect. 8 14
4 100.17 precipitation 0.1 10 < th dose independent rect. 22 10
5 100.17 precipitation 0.1 10 < th dose dependent rect. 22 10
8 100.52 wind 5.0 90 < th dose independent rect. 22 10
10 101.07 temperature 10.0 90 > th dose independent rect. 22 10
11 101.07 temperature 30.0 90 < th dose independent rect. 22 10
12 101.07 humidity 50.0 90 > th dose independent rect. 22 10
14 101.07 atmosphere 995.0 90 > th dose independent rect. 22 10
16 101.07 atmosphere 1015.0 90 < th dose independent rect. 8 14
18 101.09 wind 7.0 10 < th dose independent rect. 22 10
19 101.15 radiation 40.0 90 < th dose independent rect. 22 10
20 101.23 wind 9.0 90 < th dose dependent rect. 22 10
34 101.83 temperature 10.0 1440 > th dose independent rect. 23 10
37 101.83 humidity 50.0 1440 > th dose independent rect. 23 10
39 101.83 atmosphere 995.0 1440 > th dose independent rect. 23 10
40 101.83 temperature 10.0 1440 > th dose independent rect. 9 14
53 101.92 atmosphere 995.0 90 > th dose independent rect. 8 14
60 102.38 wind 9.0 90 < th dose independent rect. 8 14
64 102.60 precipitation 0.1 10 < th dose independent rect. 8 14
65 102.60 precipitation 0.1 10 < th dose dependent rect. 8 14
68 102.73 radiation 20.0 270 < th dose independent rect. 16 11
72 103.01 radiation 1.0 90 > th dose independent rect. 12 20
76 103.16 precipitation 0.1 270 < th dose independent rect. 20 11
77 103.16 humidity 50.0 90 > th dose dependent rect. 22 10
78 103.16 precipitation 0.1 270 < th dose dependent rect. 20 11
85 103.44 radiation 40.0 270 < th dose dependent rect. 15 12
87 103.58 temperature 10.0 270 > th dose independent rect. 20 11
88 103.58 temperature 30.0 270 < th dose independent rect. 20 11
89 103.58 humidity 50.0 270 > th dose independent rect. 20 11
91 103.58 atmosphere 995.0 270 > th dose independent rect. 20 11
92 103.58 radiation 40.0 270 < th dose independent rect. 20 11
112 103.63 wind 9.0 270 < th dose independent rect. 20 11
137 103.87 wind 9.0 1440 < th dose independent rect. 23 10
140 103.96 precipitation 0.1 90 < th dose independent rect. 21 23
141 103.96 radiation 40.0 270 < th dose dependent rect. 21 11
142 103.96 precipitation 0.1 90 < th dose dependent rect. 21 23
148 104.10 radiation 1.0 90 < th dose independent rect. 16 14
152 104.21 radiation 20.0 720 < th dose dependent rect. 17 10
154 104.23 precipitation 0.1 270 < th dose independent rect. 3 13
155 104.23 precipitation 0.1 270 < th dose dependent rect. 3 13
183 104.61 wind 9.0 270 < th dose independent rect. 3 13
194 104.83 wind 1.0 90 > th dose independent rect. 8 14
195 104.84 temperature 10.0 270 > th dose independent rect. 16 11
199 104.84 radiation 40.0 270 < th dose independent rect. 16 11
200 104.84 temperature 10.0 270 > th dose independent rect. 3 13
202 104.84 atmosphere 1015.0 270 < th dose independent rect. 3 13
211 104.94 radiation 1.0 90 < th dose dependent rect. 16 14
216 105.00 humidity 50.0 270 > th dose independent rect. 16 11
230 105.21 wind 9.0 270 < th dose independent rect. 16 11
257 105.52 radiation 10.0 720 < th dose dependent rect. 17 2
264 105.60 atmosphere 995.0 270 > th dose independent rect. 16 11
273 105.69 radiation 1.0 90 < th dose independent rect. 11 19
291 105.86 radiation 1.0 90 > th dose independent rect. 9 23
310 106.00 radiation 20.0 720 < th dose independent rect. 16 4
320 106.23 radiation 1.0 90 < th dose dependent rect. 11 19
341 106.48 precipitation 0.1 1440 < th dose independent rect. 9 4
343 106.48 precipitation 0.1 1440 < th dose dependent rect. 9 4
350 106.59 atmosphere 1005.0 90 > th dose dependent rect. 17 5
352 106.61 radiation 1.0 720 > th dose independent rect. 8 4
353 106.65 radiation 40.0 720 < th dose dependent rect. 16 4
361 106.70 temperature 15.0 720 > th dose independent rect. 8 4
390 106.89 temperature 15.0 30 > th dose dependent rect. 20 16
392 106.90 radiation 40.0 720 < th dose independent rect. 19 14
395 106.94 humidity 50.0 90 > th dose independent rect. 8 14
400 107.01 wind 9.0 720 < th dose independent rect. 19 14
403 107.04 wind 7.0 720 < th dose independent rect. 20 4
405 107.07 temperature 30.0 270 < th dose independent rect. 16 11
408 107.08 radiation 10.0 720 < th dose independent rect. 17 2
448 107.31 radiation 1.0 90 < th dose dependent rect. 16 20
456 107.39 atmosphere 995.0 270 > th dose independent rect. 3 13
457 107.39 precipitation 0.1 720 < th dose independent rect. 12 20
458 107.39 precipitation 0.1 720 < th dose dependent rect. 12 20
466 107.51 temperature 10.0 720 > th dose independent rect. 9 10
467 107.51 atmosphere 1015.0 720 < th dose independent rect. 9 10
468 107.51 temperature 10.0 720 > th dose independent rect. 19 14
469 107.51 humidity 50.0 720 > th dose independent rect. 19 14
470 107.51 atmosphere 995.0 720 > th dose independent rect. 19 14
473 107.52 atmosphere 1015.0 270 < th dose independent rect. 16 11
474 107.52 temperature 15.0 30 > th dose dependent rect. 8 4
483 107.59 precipitation 0.1 270 < th dose independent rect. 12 12
484 107.59 precipitation 0.1 270 < th dose dependent rect. 12 12
501 107.63 atmosphere 1015.0 720 < th dose independent rect. 24 20
504 107.66 precipitation 0.1 30 < th dose independent rect. 14 18
506 107.66 precipitation 0.1 30 < th dose dependent rect. 14 18
522 107.79 humidity 50.0 720 > th dose independent rect. 16 20
523 107.80 radiation 1.0 720 > th dose independent rect. 9 2
532 107.81 humidity 50.0 720 > th dose independent rect. 16 4
543 107.81 precipitation 0.1 270 < th dose independent rect. 9 23
545 107.81 precipitation 0.1 270 < th dose dependent rect. 9 23
553 107.87 temperature 15.0 720 > th dose independent rect. 9 2
557 107.89 atmosphere 1015.0 720 < th dose independent rect. 24 4
583 107.99 radiation 1.0 90 < th dose independent rect. 16 20
593 108.04 wind 9.0 720 < th dose independent rect. 8 4
596 108.04 precipitation 0.1 720 < th dose independent rect. 4 20
597 108.04 precipitation 0.1 720 < th dose dependent rect. 4 20
605 108.07 temperature 15.0 270 > th dose independent rect. 24 12
606 108.08 radiation 1.0 90 > th dose independent sin 13 NA
607 108.09 radiation 1.0 90 < th dose independent sin 13 NA
613 108.10 humidity 50.0 720 > th dose independent rect. 17 18
614 108.10 atmosphere 995.0 90 > th dose dependent rect. 22 10
618 108.11 wind 7.0 720 < th dose independent rect. 3 6
621 108.12 atmosphere 995.0 720 > th dose independent rect. 8 4
622 108.12 atmosphere 1015.0 720 < th dose independent rect. 8 4
626 108.12 temperature 10.0 720 > th dose independent rect. 12 20
627 108.12 precipitation 0.1 30 < th dose independent rect. 12 20
629 108.12 precipitation 0.1 30 < th dose dependent rect. 12 20
630 108.13 atmosphere 1015.0 720 < th dose independent rect. 23 13
635 108.14 precipitation 0.1 90 > th dose independent rect. 19 11
642 108.18 radiation 40.0 720 < th dose independent rect. 3 6
659 108.25 temperature 15.0 720 > th dose independent rect. 16 4
663 108.27 humidity 90.0 10 < th dose independent rect. 8 6
665 108.28 atmosphere 1015.0 90 < th dose independent rect. 22 10
669 108.29 temperature 30.0 90 < th dose dependent rect. 22 10
670 108.30 wind 7.0 720 < th dose independent rect. 21 2
683 108.36 temperature 10.0 720 > th dose independent rect. 20 4
684 108.36 temperature 30.0 720 < th dose independent rect. 20 4
685 108.36 humidity 50.0 720 > th dose independent rect. 20 4
688 108.36 atmosphere 995.0 720 > th dose independent rect. 20 4
689 108.36 radiation 1.0 720 < th dose independent rect. 20 4
694 108.36 temperature 10.0 720 > th dose independent rect. 24 20
696 108.36 radiation 1.0 720 < th dose dependent rect. 20 4
731 108.44 radiation 1.0 90 < th dose dependent no NA NA
737 108.48 wind 7.0 720 < th dose independent rect. 4 4
757 108.54 precipitation 0.1 720 < th dose independent rect. 12 4
758 108.54 precipitation 0.1 720 < th dose dependent rect. 12 4
764 108.56 radiation 30.0 720 < th dose independent rect. 4 4
782 108.64 wind 9.0 720 < th dose independent rect. 12 20
788 108.65 atmosphere 1005.0 270 > th dose dependent rect. 17 2
795 108.68 temperature 10.0 720 > th dose independent rect. 12 4
796 108.68 atmosphere 1015.0 720 < th dose independent rect. 12 4
797 108.68 temperature 10.0 720 > th dose independent rect. 16 20
817 108.71 radiation 1.0 90 < th dose dependent rect. 23 23
818 108.72 atmosphere 1015.0 720 < th dose independent rect. 15 6
819 108.73 atmosphere 1015.0 720 < th dose independent rect. 24 11
823 108.74 temperature 10.0 720 > th dose independent rect. 24 4
824 108.74 temperature 30.0 720 < th dose independent rect. 24 4
825 108.74 humidity 50.0 720 > th dose independent rect. 24 4
828 108.74 atmosphere 995.0 720 > th dose independent rect. 24 4
829 108.74 radiation 1.0 720 < th dose independent rect. 24 4
835 108.74 temperature 10.0 720 > th dose independent rect. 4 20
837 108.74 radiation 1.0 720 < th dose dependent rect. 24 4
846 108.76 temperature 15.0 90 > th dose independent rect. 7 23
854 108.78 wind 9.0 720 < th dose independent rect. 24 4
856 108.78 temperature 10.0 720 > th dose independent rect. 3 6
857 108.78 humidity 50.0 720 > th dose independent rect. 3 6
858 108.78 atmosphere 995.0 720 > th dose independent rect. 3 6
862 108.78 temperature 10.0 720 > th dose independent rect. 9 18
867 108.80 wind 9.0 720 < th dose independent rect. 12 4
868 108.80 temperature 10.0 720 > th dose independent rect. 4 4
869 108.80 temperature 30.0 720 < th dose independent rect. 4 4
870 108.80 humidity 50.0 720 > th dose independent rect. 4 4
872 108.80 atmosphere 995.0 720 > th dose independent rect. 4 4
873 108.80 atmosphere 1015.0 720 < th dose independent rect. 4 4
878 108.80 temperature 10.0 720 > th dose independent rect. 8 20
880 108.81 precipitation 0.1 720 < th dose independent rect. 19 5
883 108.81 precipitation 0.1 720 < th dose dependent rect. 19 5
887 108.82 atmosphere 1015.0 30 < th dose independent rect. 8 22
896 108.84 precipitation 0.1 720 < th dose independent rect. 11 6
898 108.84 precipitation 0.1 720 < th dose dependent rect. 11 6
906 108.86 precipitation 0.1 720 < th dose independent rect. 9 2
916 108.86 precipitation 0.1 720 < th dose dependent rect. 9 2
930 108.93 temperature 10.0 30 > th dose dependent rect. 8 6
958 109.00 atmosphere 995.0 720 > th dose independent rect. 9 2
959 109.00 atmosphere 1015.0 720 < th dose independent rect. 9 2
962 109.00 temperature 10.0 720 > th dose independent rect. 11 22
967 109.01 atmosphere 1015.0 720 < th dose independent rect. 16 4
981 109.01 temperature 10.0 720 > th dose independent rect. 20 20
987 109.02 wind 9.0 720 < th dose independent rect. 9 2