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Os01g0901300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.73 (0.0387) R2 : 0.754
β1 : -1.65 (0.147) R2dD : 0.0694 R2D : 0.0268
β2 : 3.01 (0.097) R2dC : 0.584 R2C : 0.668
β3 : 1.13 (0.14) R2dE : 0.0504 R2E : 0.104
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.167 (0.0865) R2dN8 : 0.00295 R2N8 : -0.0117
σ : 0.715
deviance : 235.47
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C
peak time of C : 22.2
E
wheather : temperature
threshold : 20.67
memory length : 1026
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
229.96 0.712 6.87 -2.93 3.22 1.46 0.893 -5.87 -0.342 22.4 25.69 1584 -- --
235.56 0.715 6.73 -1.7 2.92 1.25 1.12 -- -0.247 22.3 19.25 906 -- --
233.16 0.711 6.87 -2.94 3.21 1.47 -- -5.87 -0.331 22.4 25.78 1597 -- --
235.47 0.715 6.73 -1.65 3.01 1.13 -- -- -0.167 22.2 20.67 1026 -- --
657.69 1.19 6.8 -2.81 -- 3.21 -- -4.27 -0.634 -- 22.47 794 -- --
267.49 0.767 6.67 -1.17 3.26 -- 0.89 -- 0.0825 22.3 -- -- -- --
270.69 0.77 6.67 -1.2 3.26 -- -- -- 0.0804 22.3 -- -- -- --
670.91 1.21 6.71 -2 -- 3 -- -- -0.44 -- 21.61 799 -- --
293.3 0.798 6.67 -- 3.09 0.724 -- -- 0.0922 22.2 21.8 1033 -- --
917.97 1.42 6.59 -1.15 -- -- -- -- 0.0893 -- -- -- -- --
308.77 0.822 6.64 -- 3.25 -- -- -- 0.214 22.3 -- -- -- --
759.8 1.28 6.61 -- -- 2.54 -- -- -0.00779 -- 24 796 -- --
952.97 1.44 6.56 -- -- -- -- -- 0.217 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 219.15 temperature 25 270 > th dose independent rect. 8 10
4 221.53 humidity 90 43200 < th dose independent rect. 5 1
5 221.56 radiation 1 4320 < th dose independent rect. 2 3
6 221.63 radiation 1 4320 < th dose independent rect. 4 1
7 221.64 temperature 25 270 < th dose independent rect. 6 15
14 222.40 radiation 10 1440 < th dose independent rect. 20 11
16 222.41 radiation 10 1440 < th dose independent rect. 22 9
18 222.47 radiation 10 1440 < th dose independent rect. 24 7
20 222.49 radiation 10 1440 < th dose independent rect. 2 5
32 223.07 temperature 30 270 < th dose dependent rect. 6 16
44 223.66 humidity 60 14400 < th dose independent rect. 17 1
45 223.69 temperature 30 270 < th dose dependent rect. 5 8
48 223.78 humidity 70 14400 < th dose independent rect. 21 10
49 223.83 temperature 25 270 < th dose independent rect. 7 3
50 223.85 humidity 60 14400 > th dose independent rect. 17 1
53 223.91 temperature 25 270 > th dose independent sin 23 NA
57 224.06 humidity 90 43200 < th dose independent rect. 1 10
59 224.33 temperature 25 270 < th dose independent rect. 6 7
67 224.67 humidity 90 43200 < th dose independent rect. 24 12
69 224.74 temperature 20 270 > th dose dependent rect. 1 17
70 224.77 humidity 90 43200 < th dose independent sin 7 NA
75 224.91 humidity 90 43200 < th dose independent rect. 20 14
76 224.92 radiation 1 1440 > th dose dependent rect. 4 2
102 225.26 temperature 20 720 > th dose dependent rect. 23 14
112 225.32 temperature 20 720 > th dose dependent sin 7 NA
124 225.51 humidity 80 43200 > th dose dependent rect. 2 10
125 225.52 radiation 1 4320 > th dose independent rect. 4 1
153 225.73 radiation 30 14400 < th dose independent rect. 16 10
157 225.76 radiation 30 14400 < th dose independent rect. 16 12
161 225.78 humidity 80 43200 > th dose dependent rect. 1 12
187 225.88 temperature 25 270 < th dose independent rect. 9 1
191 225.91 humidity 70 14400 < th dose independent rect. 19 13
210 226.15 humidity 60 14400 < th dose independent rect. 16 3
213 226.20 humidity 90 43200 > th dose independent rect. 5 1
224 226.31 humidity 70 14400 > th dose independent rect. 7 1
228 226.33 humidity 60 14400 < th dose independent rect. 16 16
233 226.37 humidity 60 14400 > th dose independent rect. 17 15
236 226.42 humidity 70 14400 < th dose independent rect. 7 1
246 226.49 temperature 25 1440 < th dose independent rect. 17 1
247 226.49 radiation 30 14400 < th dose independent rect. 16 3
258 226.54 humidity 90 43200 < th dose independent rect. 3 6
264 226.58 humidity 80 43200 > th dose dependent rect. 3 8
302 227.03 radiation 30 4320 < th dose dependent rect. 4 1
312 227.15 temperature 25 1440 > th dose independent rect. 17 1
329 227.27 humidity 90 43200 < th dose independent rect. 4 3
331 227.29 humidity 60 14400 < th dose independent rect. 16 6
340 227.30 temperature 10 270 > th dose dependent rect. 1 16
349 227.37 radiation 20 4320 < th dose dependent rect. 2 3
362 227.45 radiation 40 270 < th dose independent rect. 5 7
366 227.47 temperature 20 720 > th dose dependent rect. 1 10
379 227.58 humidity 70 14400 < th dose dependent rect. 17 15
384 227.61 temperature 25 1440 > th dose dependent rect. 16 1
385 227.62 temperature 25 1440 > th dose dependent rect. 15 3
391 227.67 humidity 90 43200 > th dose independent rect. 24 11
398 227.71 humidity 90 43200 > th dose independent rect. 21 13
399 227.71 humidity 80 43200 > th dose dependent sin 4 NA
409 227.79 humidity 70 14400 > th dose independent rect. 2 6
412 227.81 humidity 70 14400 > th dose independent rect. 4 4
432 227.87 humidity 90 43200 > th dose independent sin 8 NA
433 227.87 humidity 90 43200 < th dose independent rect. 20 6
439 227.92 humidity 90 43200 > th dose independent rect. 4 3
442 227.95 radiation 10 1440 < th dose dependent rect. 20 10
444 227.96 temperature 25 270 < th dose independent sin 23 NA
446 227.96 radiation 10 1440 < th dose dependent rect. 22 8
448 227.97 humidity 60 14400 > th dose independent rect. 17 8
486 228.08 radiation 10 1440 < th dose dependent rect. 24 6
505 228.22 radiation 1 14400 < th dose independent rect. 10 1
506 228.22 radiation 1 14400 < th dose dependent rect. 10 1
516 228.28 humidity 70 14400 < th dose dependent rect. 17 2
556 228.47 humidity 90 43200 > th dose dependent rect. 4 2
617 228.71 temperature 25 1440 > th dose dependent rect. 11 7
644 228.83 temperature 30 270 < th dose dependent rect. 7 3
719 229.03 radiation 1 14400 > th dose dependent rect. 18 1
777 229.21 humidity 80 14400 < th dose dependent rect. 6 2
783 229.23 humidity 90 43200 < th dose independent rect. 21 1
798 229.29 humidity 70 14400 > th dose independent rect. 19 13
815 229.37 atmosphere 1010 90 < th dose independent rect. 3 16
825 229.40 humidity 80 43200 > th dose dependent rect. 18 19
916 229.70 humidity 70 14400 < th dose dependent rect. 17 5
932 229.73 humidity 90 43200 > th dose independent rect. 21 5
935 229.73 atmosphere 1010 90 < th dose independent rect. 1 18
939 229.74 temperature 30 270 < th dose dependent sin 23 NA
952 229.77 temperature 20 270 > th dose dependent sin 1 NA
974 229.87 radiation 10 1440 < th dose independent sin 11 NA
977 229.88 humidity 90 43200 > th dose independent rect. 20 7
981 229.90 radiation 40 14400 > th dose dependent rect. 15 17