Os01g0898900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Nucleotide-sugar transporter family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0898900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Nucleotide-sugar transporter family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 134.05 | 0.544 | 6.87 | 1.23 | 1.27 | 2.34 | -0.349 | -3.14 | 0.193 | 8.67 | 20.43 | 10 | -- | -- |
| 141.38 | 0.554 | 6.81 | 1.73 | 1.27 | 2.66 | -0.714 | -- | 0.356 | 8.95 | 14.39 | 9 | -- | -- |
| 134.42 | 0.54 | 6.88 | 1.18 | 1.28 | 2.35 | -- | -3.32 | 0.185 | 8.64 | 20.5 | 10 | -- | -- |
| 143.36 | 0.558 | 6.82 | 1.68 | 1.26 | 2.71 | -- | -- | 0.338 | 8.84 | 14.32 | 9 | -- | -- |
| 222.09 | 0.694 | 6.92 | 1.13 | -- | 2.55 | -- | -3.4 | 0.157 | -- | 19.92 | 3 | -- | -- |
| 209.61 | 0.679 | 6.73 | 2.25 | 1.56 | -- | -0.942 | -- | 0.723 | 10.8 | -- | -- | -- | -- |
| 213.32 | 0.684 | 6.73 | 2.21 | 1.56 | -- | -- | -- | 0.72 | 10.8 | -- | -- | -- | -- |
| 230.9 | 0.708 | 6.86 | 1.62 | -- | 3.03 | -- | -- | 0.303 | -- | 9.527 | 3 | -- | -- |
| 210.31 | 0.675 | 6.88 | -- | 1.27 | 3.53 | -- | -- | 0.0503 | 8.03 | 13.53 | 12 | -- | -- |
| 364.26 | 0.892 | 6.77 | 2.17 | -- | -- | -- | -- | 0.71 | -- | -- | -- | -- | -- |
| 341.66 | 0.865 | 6.78 | -- | 1.55 | -- | -- | -- | 0.474 | 10.7 | -- | -- | -- | -- |
| 296.3 | 0.802 | 6.91 | -- | -- | 3.54 | -- | -- | 0.0649 | -- | 9.91 | 3 | -- | -- |
| 489.04 | 1.03 | 6.82 | -- | -- | -- | -- | -- | 0.469 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 120.37 | temperature | 20 | 90 | > th | dose dependent | rect. | 4 | 21 |
| 2 | 120.38 | temperature | 20 | 10 | > th | dose dependent | rect. | 5 | 20 |
| 47 | 131.71 | temperature | 30 | 10 | < th | dose dependent | rect. | 6 | 23 |
| 75 | 134.31 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 84 | 135.31 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 87 | 135.38 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 91 | 135.68 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 99 | 136.38 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 109 | 136.64 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 110 | 136.68 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 117 | 137.14 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 126 | 137.58 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 136 | 137.99 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 164 | 139.38 | temperature | 25 | 30 | < th | dose independent | rect. | 6 | 22 |
| 165 | 139.43 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 180 | 140.10 | temperature | 15 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 194 | 140.51 | temperature | 20 | 90 | > th | dose dependent | rect. | 14 | 23 |
| 195 | 140.52 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 211 | 140.85 | temperature | 20 | 10 | > th | dose dependent | rect. | 24 | 23 |
| 220 | 141.10 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 10 |
| 224 | 141.22 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 225 | 141.25 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 10 |
| 238 | 141.42 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 19 |
| 239 | 141.42 | temperature | 20 | 30 | > th | dose dependent | rect. | 20 | 23 |
| 260 | 141.57 | temperature | 20 | 10 | > th | dose dependent | rect. | 22 | 23 |
| 287 | 141.66 | temperature | 20 | 90 | > th | dose dependent | rect. | 11 | 23 |
| 300 | 141.73 | temperature | 10 | 1440 | > th | dose dependent | sin | 2 | NA |
| 331 | 141.85 | temperature | 30 | 1440 | < th | dose dependent | sin | 2 | NA |
| 370 | 141.97 | temperature | 10 | 720 | > th | dose dependent | rect. | 11 | 21 |
| 525 | 142.36 | temperature | 30 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 566 | 142.44 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 593 | 142.51 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |
| 595 | 142.51 | temperature | 10 | 1440 | > th | dose dependent | rect. | 8 | 22 |
| 703 | 142.66 | temperature | 10 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 768 | 142.77 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 22 |
| 783 | 142.79 | temperature | 30 | 1440 | < th | dose dependent | rect. | 19 | 21 |
| 836 | 142.88 | temperature | 30 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 857 | 142.92 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |
| 971 | 143.14 | temperature | 30 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 972 | 143.14 | temperature | 30 | 1440 | < th | dose dependent | rect. | 13 | 23 |