Os01g0894600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : RINGv domain containing protein.
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Os01g0894600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : RINGv domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 77.31 | 0.413 | 8.48 | -2.15 | 0.572 | 0.561 | -0.43 | -0.433 | -0.569 | 9.23 | 24.6 | 1548 | -- | -- |
| 77.55 | 0.41 | 8.46 | -2.02 | 0.574 | 0.526 | -0.439 | -- | -0.524 | 9.21 | 24.69 | 1556 | -- | -- |
| 77.96 | 0.411 | 8.48 | -2.15 | 0.572 | 0.56 | -- | -0.396 | -0.565 | 9.24 | 24.6 | 1546 | -- | -- |
| 78.18 | 0.412 | 8.46 | -2.03 | 0.573 | 0.533 | -- | -- | -0.526 | 9.23 | 24.6 | 1546 | -- | -- |
| 96.91 | 0.458 | 8.49 | -2.15 | -- | 0.553 | -- | -0.392 | -0.56 | -- | 24.62 | 1494 | -- | -- |
| 86.16 | 0.435 | 8.42 | -1.83 | 0.57 | -- | -0.422 | -- | -0.338 | 9.15 | -- | -- | -- | -- |
| 86.79 | 0.436 | 8.42 | -1.84 | 0.571 | -- | -- | -- | -0.338 | 9.16 | -- | -- | -- | -- |
| 97.11 | 0.459 | 8.47 | -2.05 | -- | 0.519 | -- | -- | -0.519 | -- | 24.69 | 1501 | -- | -- |
| 123.29 | 0.517 | 8.3 | -- | 0.485 | -1.16 | -- | -- | 0.187 | 10.1 | 18.4 | 47520 | -- | -- |
| 105.68 | 0.48 | 8.43 | -1.85 | -- | -- | -- | -- | -0.335 | -- | -- | -- | -- | -- |
| 176.4 | 0.621 | 8.37 | -- | 0.572 | -- | -- | -- | -0.133 | 9.41 | -- | -- | -- | -- |
| 140.21 | 0.551 | 8.32 | -- | -- | -1.19 | -- | -- | 0.15 | -- | 18.33 | 47520 | -- | -- |
| 195.54 | 0.653 | 8.39 | -- | -- | -- | -- | -- | -0.13 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 72.44 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 2 | 72.55 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 9 |
| 4 | 72.61 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 9 |
| 5 | 72.62 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 7 |
| 13 | 72.85 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 13 |
| 29 | 73.41 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 32 | 73.59 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 33 | 73.61 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 15 |
| 38 | 73.81 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 40 | 73.87 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 4 |
| 46 | 73.96 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 49 | 74.01 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 4 |
| 57 | 74.10 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 19 | 5 |
| 71 | 74.23 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 6 |
| 74 | 74.26 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 7 |
| 96 | 74.43 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 10 | 20 |
| 135 | 74.79 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 173 | 75.15 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 16 | 3 |
| 179 | 75.20 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 15 | 15 |
| 190 | 75.29 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 219 | 75.44 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 220 | 75.44 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 221 | 75.45 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 17 | 19 |
| 231 | 75.50 | atmosphere | 1005.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 236 | 75.53 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 253 | 75.61 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 21 |
| 269 | 75.67 | wind | 7.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 299 | 75.76 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 313 | 75.81 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 314 | 75.81 | humidity | 80.0 | 43200 | > th | dose dependent | sin | 15 | NA |
| 318 | 75.81 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 12 | 22 |
| 341 | 75.87 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 342 | 75.87 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 347 | 75.88 | atmosphere | 1005.0 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 355 | 75.90 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 14 | 16 |
| 406 | 75.99 | atmosphere | 1005.0 | 43200 | < th | dose dependent | rect. | 10 | 15 |
| 412 | 76.00 | humidity | 80.0 | 43200 | > th | dose dependent | no | NA | NA |
| 444 | 76.02 | atmosphere | 1005.0 | 43200 | < th | dose dependent | sin | 22 | NA |
| 457 | 76.02 | atmosphere | 1005.0 | 43200 | < th | dose dependent | rect. | 22 | 18 |
| 517 | 76.05 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 6 | 23 |
| 519 | 76.06 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 13 | 3 |
| 590 | 76.09 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 3 | 23 |
| 592 | 76.09 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 24 | 23 |
| 629 | 76.11 | atmosphere | 1005.0 | 43200 | < th | dose dependent | no | NA | NA |
| 630 | 76.11 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 653 | 76.12 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 701 | 76.13 | atmosphere | 1005.0 | 43200 | < th | dose dependent | rect. | 15 | 23 |
| 727 | 76.15 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 8 | 7 |
| 731 | 76.15 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 749 | 76.16 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 750 | 76.16 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 753 | 76.16 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 787 | 76.17 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 16 | 1 |
| 821 | 76.18 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 17 | 7 |
| 878 | 76.21 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 17 | 11 |
| 916 | 76.24 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 958 | 76.26 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 10 | 20 |
| 960 | 76.27 | wind | 1.0 | 43200 | < th | dose independent | rect. | 16 | 3 |
| 961 | 76.27 | temperature | 20.0 | 1440 | > th | dose dependent | sin | 14 | NA |
| 981 | 76.28 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 14 | 2 |