Os01g0885200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0885200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 47.69 | 0.324 | 10.7 | 0.937 | 0.416 | 1.37 | 0.235 | -1.09 | 0.388 | 5.46 | 25.5 | 593 | -- | -- |
| 49.39 | 0.327 | 10.8 | 0.748 | 0.407 | 1.48 | 0.282 | -- | 0.362 | 5.13 | 25.14 | 600 | -- | -- |
| 47.81 | 0.322 | 10.8 | 0.929 | 0.409 | 1.38 | -- | -1.03 | 0.387 | 5.47 | 25.57 | 587 | -- | -- |
| 49.02 | 0.326 | 10.8 | 0.744 | 0.449 | 1.48 | -- | -- | 0.326 | 5.62 | 24.57 | 587 | -- | -- |
| 48.78 | 0.325 | 10.7 | 1.06 | -- | 1.66 | -- | -1.58 | 0.446 | -- | 29.9 | 458 | -- | -- |
| 80.94 | 0.422 | 10.8 | 0.345 | 0.581 | -- | -0.0581 | -- | 0.0326 | 6.53 | -- | -- | -- | -- |
| 80.95 | 0.421 | 10.8 | 0.344 | 0.581 | -- | -- | -- | 0.0328 | 6.52 | -- | -- | -- | -- |
| 51.21 | 0.333 | 10.8 | 0.781 | -- | 1.65 | -- | -- | 0.379 | -- | 29.39 | 449 | -- | -- |
| 61.86 | 0.366 | 10.8 | -- | 0.482 | 1.16 | -- | -- | 0.191 | 5.94 | 24.54 | 561 | -- | -- |
| 98.51 | 0.464 | 10.8 | 0.358 | -- | -- | -- | -- | 0.0448 | -- | -- | -- | -- | -- |
| 84.07 | 0.429 | 10.8 | -- | 0.585 | -- | -- | -- | -0.00557 | 6.49 | -- | -- | -- | -- |
| 65.32 | 0.376 | 10.8 | -- | -- | 1.4 | -- | -- | 0.245 | -- | 29.6 | 419 | -- | -- |
| 101.9 | 0.471 | 10.9 | -- | -- | -- | -- | -- | 0.00499 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 42.56 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 15 |
| 4 | 42.89 | temperature | 15 | 720 | > th | dose dependent | sin | 10 | NA |
| 31 | 44.85 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 17 |
| 93 | 45.92 | temperature | 25 | 720 | < th | dose dependent | sin | 11 | NA |
| 195 | 46.95 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 232 | 47.26 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 7 |
| 234 | 47.28 | temperature | 20 | 1440 | > th | dose dependent | rect. | 19 | 5 |
| 260 | 47.43 | temperature | 15 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 273 | 47.50 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 328 | 47.74 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 397 | 48.00 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 406 | 48.02 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 461 | 48.13 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 3 |
| 490 | 48.18 | humidity | 90 | 14400 | > th | dose dependent | rect. | 21 | 5 |
| 532 | 48.26 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 758 | 48.64 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 967 | 48.96 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 3 |