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Os01g0879400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Glycoside hydrolase, family 43 protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10 (0.0108) R2 : 0.0337
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0904 (0.0227) R2dN8 : 0.0435 R2N8 : 0.0337
σ : 0.203
deviance : 18.87
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
14.15 0.177 9.96 0.602 0.161 -0.17 0.556 3.36 0.00648 8.89 27.38 725 -- --
14.75 0.18 10 0.192 0.201 0.322 -0.00733 -- -0.0697 5.97 27.16 233 -- --
14.73 0.18 10 0.144 0.198 0.379 -- -0.666 -0.0773 5.97 27.38 725 -- --
14.62 0.179 10 0.188 0.208 0.325 -- -- -0.0747 5.81 26.54 168 -- --
15.86 0.185 9.96 0.684 -- -0.112 -- 2.42 0.0287 -- 27.33 4035 -- --
16 0.188 10 0.223 0.143 -- 0.295 -- -0.0658 8.79 -- -- -- --
16.18 0.188 10 0.231 0.153 -- -- -- -0.0668 7.67 -- -- -- --
16.33 0.188 10 0.146 -- 0.16 -- -- -0.14 -- 29.4 13050 -- --
15.49 0.184 10 -- 0.225 0.368 -- -- -0.0986 5.55 26.3 130 -- --
17.44 0.195 10 0.233 -- -- -- -- -0.0646 -- -- -- -- --
17.59 0.196 10 -- 0.155 -- -- -- -0.0926 7.57 -- -- -- --
16.92 0.192 10 -- -- 0.199 -- -- -0.173 -- 29.33 13050 -- --
18.87 0.203 10 -- -- -- -- -- -0.0904 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 13.32 temperature 30 720 > th dose independent rect. 13 1
2 13.34 temperature 30 720 < th dose independent rect. 7 5
4 13.38 temperature 25 90 > th dose dependent sin 12 NA
6 13.42 atmosphere 1005 270 > th dose independent rect. 15 12
7 13.42 temperature 30 720 < th dose independent rect. 22 14
8 13.43 temperature 30 720 < th dose independent rect. 24 12
9 13.44 temperature 25 90 > th dose independent rect. 16 11
11 13.46 temperature 25 10 > th dose independent rect. 16 11
14 13.47 temperature 30 10 < th dose independent rect. 9 10
19 13.50 temperature 30 720 < th dose independent rect. 24 10
24 13.52 temperature 25 90 > th dose dependent rect. 17 10
25 13.52 temperature 25 90 > th dose dependent rect. 17 13
30 13.54 temperature 30 10 < th dose independent rect. 11 8
40 13.57 temperature 30 270 < th dose independent rect. 15 13
46 13.58 temperature 10 720 > th dose dependent rect. 4 3
50 13.59 temperature 30 720 < th dose independent rect. 11 1
52 13.59 temperature 30 270 < th dose independent rect. 8 11
53 13.59 temperature 25 90 > th dose independent rect. 16 14
88 13.64 temperature 25 10 > th dose dependent rect. 18 9
90 13.64 temperature 25 10 > th dose dependent rect. 18 12
94 13.65 temperature 30 720 < th dose independent rect. 9 1
105 13.67 humidity 70 90 > th dose independent rect. 15 14
152 13.74 atmosphere 1000 90 > th dose dependent rect. 15 14
160 13.76 temperature 10 720 > th dose dependent rect. 3 6
192 13.81 humidity 70 90 > th dose independent rect. 13 16
215 13.84 temperature 25 90 > th dose independent sin 13 NA
220 13.84 temperature 30 720 < th dose dependent rect. 7 3
235 13.85 atmosphere 995 720 > th dose dependent rect. 16 3
242 13.86 atmosphere 1005 270 > th dose independent sin 16 NA
310 13.94 temperature 30 720 > th dose independent sin 5 NA
312 13.94 temperature 25 90 < th dose independent sin 14 NA
315 13.94 temperature 30 720 < th dose dependent rect. 9 1
336 13.97 temperature 30 720 < th dose independent rect. 8 23
341 13.97 atmosphere 1015 10 < th dose dependent rect. 19 14
351 13.98 temperature 30 720 < th dose independent rect. 12 23
359 13.99 temperature 30 720 < th dose independent sin 22 NA
376 14.00 temperature 30 270 < th dose independent rect. 11 16
377 14.00 temperature 30 720 < th dose independent rect. 7 21
395 14.01 temperature 30 720 < th dose independent rect. 24 17
417 14.03 atmosphere 1000 270 > th dose independent rect. 7 21
433 14.04 temperature 30 10 < th dose independent rect. 11 18
435 14.04 temperature 30 720 < th dose dependent rect. 24 10
442 14.05 temperature 30 720 < th dose independent rect. 6 17
443 14.05 humidity 70 90 > th dose independent rect. 11 18
459 14.06 temperature 30 720 < th dose independent rect. 7 15
481 14.07 temperature 30 720 < th dose independent rect. 10 23
486 14.07 temperature 10 720 > th dose dependent rect. 4 11
489 14.08 atmosphere 1005 720 > th dose independent rect. 16 3
492 14.08 temperature 30 10 < th dose independent rect. 11 12
508 14.09 atmosphere 1005 720 > th dose independent rect. 16 5
553 14.10 temperature 25 30 < th dose independent rect. 16 10
585 14.10 atmosphere 995 30 > th dose dependent rect. 11 18
587 14.10 atmosphere 995 90 > th dose dependent rect. 9 20
588 14.10 atmosphere 995 10 > th dose dependent rect. 9 21
589 14.11 temperature 30 4320 < th dose independent rect. 13 1
590 14.11 temperature 20 720 > th dose independent rect. 4 2
613 14.12 temperature 30 4320 < th dose independent rect. 11 3
624 14.12 atmosphere 1005 30 > th dose dependent rect. 15 8
649 14.13 temperature 30 720 > th dose dependent rect. 11 4
676 14.14 temperature 30 720 < th dose independent rect. 3 23
710 14.15 atmosphere 1000 720 > th dose independent rect. 22 14
727 14.16 temperature 30 4320 < th dose independent rect. 24 14
729 14.16 temperature 30 4320 < th dose independent rect. 22 16
731 14.16 temperature 30 4320 < th dose independent rect. 20 18
737 14.16 atmosphere 1015 10 < th dose dependent rect. 19 16
746 14.17 temperature 30 4320 < th dose independent rect. 7 7
774 14.18 temperature 30 720 < th dose independent sin 4 NA
782 14.18 temperature 30 10 < th dose independent rect. 9 14
785 14.18 temperature 30 720 < th dose independent rect. 3 21
797 14.18 temperature 15 10 > th dose dependent rect. 6 16
803 14.19 atmosphere 1005 720 > th dose independent rect. 15 8
893 14.21 temperature 30 720 < th dose independent rect. 11 4
904 14.21 temperature 30 270 < th dose independent rect. 22 21
921 14.21 temperature 10 270 > th dose dependent rect. 4 18
924 14.22 temperature 30 270 < th dose independent sin 19 NA
936 14.22 humidity 70 90 > th dose independent rect. 9 20
938 14.22 temperature 30 720 > th dose dependent sin 6 NA
963 14.22 atmosphere 995 270 > th dose dependent rect. 9 18
972 14.23 atmosphere 1000 720 > th dose independent rect. 24 10
988 14.23 temperature 10 720 > th dose dependent rect. 23 8