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Os01g0875400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Ubiquitin domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.91 (0.0143) R2 : 0.395
β1 : 0.884 (0.0525) R2dD : 0.39 R2D : 0.309
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.213 (0.0306) R2dN8 : 0.0861 R2N8 : 0.00533
σ : 0.269
deviance : 33.17
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
22.42 0.222 9.94 0.862 0.219 -0.352 -0.118 -0.681 0.146 23.9 28.8 1294 -- --
22.45 0.221 9.92 1 0.218 -0.427 -0.132 -- 0.161 23.9 28.68 1317 -- --
22.48 0.221 9.94 0.883 0.22 -0.366 -- -0.592 0.152 24 28.61 1294 -- --
22.51 0.221 9.92 1.01 0.219 -0.432 -- -- 0.166 24 28.53 1309 -- --
25 0.233 9.91 1.03 -- -0.463 -- 0.0486 0.202 -- 27.6 1539 -- --
31.24 0.262 9.91 0.87 0.164 -- -0.222 -- 0.211 23.3 -- -- -- --
31.45 0.263 9.91 0.879 0.165 -- -- -- 0.211 23.4 -- -- -- --
25 0.233 9.91 1.02 -- -0.452 -- -- 0.2 -- 27.6 1535 -- --
47.83 0.322 9.94 -- 0.21 -0.296 -- -- 0.0686 0.427 29.22 1234 -- --
33.17 0.269 9.91 0.884 -- -- -- -- 0.213 -- -- -- -- --
51.83 0.337 9.93 -- 0.175 -- -- -- 0.114 23.7 -- -- -- --
50.33 0.33 9.94 -- -- -0.3 -- -- 0.0586 -- 31.6 1550 -- --
53.76 0.342 9.93 -- -- -- -- -- 0.115 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 21.48 humidity 80 1440 < th dose dependent rect. 18 1
2 21.56 humidity 50 1440 > th dose dependent rect. 18 1
4 21.59 humidity 80 1440 < th dose dependent rect. 17 3
5 21.59 humidity 80 1440 < th dose dependent rect. 16 5
9 21.63 humidity 70 1440 > th dose independent rect. 16 12
11 21.64 humidity 70 1440 > th dose independent rect. 16 4
28 21.81 wind 7 43200 > th dose independent rect. 19 21
32 21.82 wind 7 43200 > th dose dependent rect. 17 22
34 21.83 wind 7 43200 < th dose independent rect. 18 22
46 21.85 humidity 70 1440 > th dose independent sin 13 NA
66 21.93 humidity 70 1440 < th dose independent rect. 16 4
83 21.94 wind 7 43200 > th dose independent rect. 15 23
84 21.94 wind 9 43200 > th dose dependent rect. 14 17
108 21.98 wind 7 43200 < th dose independent rect. 15 23
114 21.99 wind 7 43200 > th dose independent rect. 23 23
125 22.00 wind 9 43200 > th dose dependent sin 14 NA
131 22.01 wind 7 43200 < th dose independent rect. 23 23
136 22.02 wind 7 43200 > th dose independent no NA NA
137 22.02 wind 7 43200 > th dose independent rect. 2 23
141 22.02 wind 5 43200 > th dose dependent rect. 24 22
160 22.05 wind 7 43200 < th dose independent no NA NA
163 22.05 wind 7 43200 > th dose independent rect. 8 23
164 22.05 wind 7 43200 > th dose independent rect. 10 23
165 22.05 wind 7 43200 < th dose independent rect. 2 23
169 22.05 wind 5 43200 > th dose dependent rect. 14 23
173 22.06 wind 7 43200 < th dose independent rect. 2 20
187 22.06 wind 5 43200 > th dose dependent no NA NA
188 22.06 wind 5 43200 > th dose dependent rect. 5 11
192 22.06 wind 5 43200 > th dose dependent rect. 2 23
203 22.07 wind 7 43200 < th dose independent rect. 8 23
204 22.07 wind 7 43200 < th dose independent rect. 10 23
228 22.08 wind 9 43200 > th dose dependent rect. 14 11
229 22.08 wind 9 43200 > th dose dependent rect. 14 13
233 22.08 wind 7 43200 > th dose dependent rect. 9 23
235 22.09 wind 7 43200 > th dose independent rect. 23 17
247 22.09 wind 5 43200 > th dose dependent sin 2 NA
256 22.09 wind 5 43200 > th dose dependent rect. 7 23
259 22.10 wind 7 43200 < th dose independent rect. 24 16
311 22.12 wind 7 43200 < th dose independent rect. 4 12
312 22.12 wind 7 43200 > th dose independent rect. 2 14
313 22.12 wind 7 43200 < th dose independent rect. 2 14
329 22.12 wind 7 43200 > th dose dependent rect. 9 19
354 22.13 wind 7 43200 > th dose dependent rect. 9 17
355 22.13 wind 5 43200 > th dose dependent rect. 24 17
373 22.14 wind 9 43200 > th dose independent sin 13 NA
396 22.15 wind 7 43200 < th dose independent rect. 6 10
418 22.16 wind 9 43200 < th dose independent sin 14 NA
419 22.16 wind 7 43200 > th dose independent rect. 6 10
558 22.22 wind 7 43200 > th dose independent sin 2 NA
559 22.22 wind 7 43200 < th dose independent sin 2 NA
632 22.28 humidity 70 1440 < th dose independent sin 13 NA
717 22.35 wind 9 43200 > th dose independent rect. 14 18
780 22.39 wind 9 43200 < th dose independent rect. 14 18
784 22.39 humidity 80 1440 < th dose dependent sin 14 NA
877 22.45 wind 9 43200 > th dose independent rect. 17 14
886 22.45 temperature 30 1440 > th dose dependent rect. 17 19
931 22.48 temperature 30 1440 > th dose dependent sin 10 NA
951 22.49 wind 9 43200 > th dose independent rect. 17 19