Os01g0873800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0873800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 34.67 | 0.277 | 9.58 | -0.533 | 0.359 | -1.01 | -1.08 | -2.42 | -0.0123 | 6.65 | 20.09 | 5811 | -- | -- |
| 39.21 | 0.292 | 9.68 | -0.645 | 0.38 | -0.411 | -1.03 | -- | -0.0716 | 6.5 | 22.1 | 2224 | -- | -- |
| 37.55 | 0.285 | 9.58 | -0.547 | 0.355 | -1.03 | -- | -2.47 | -0.00758 | 6.96 | 20.1 | 5906 | -- | -- |
| 41.74 | 0.301 | 9.68 | -0.72 | 0.375 | -0.462 | -- | -- | -0.0968 | 7.2 | 22.1 | 2239 | -- | -- |
| 44.17 | 0.31 | 9.59 | -0.573 | -- | -1.05 | -- | -2.42 | -0.0115 | -- | 20 | 5758 | -- | -- |
| 45.76 | 0.317 | 9.65 | -0.504 | 0.365 | -- | -1.11 | -- | 0.0586 | 6.57 | -- | -- | -- | -- |
| 48.81 | 0.327 | 9.65 | -0.519 | 0.361 | -- | -- | -- | 0.0623 | 6.82 | -- | -- | -- | -- |
| 48.84 | 0.325 | 9.69 | -0.754 | -- | -0.459 | -- | -- | -0.102 | -- | 22.09 | 2716 | -- | -- |
| 53.19 | 0.34 | 9.65 | -- | 0.359 | -0.256 | -- | -- | 0.0371 | 7.15 | 22.5 | 2227 | -- | -- |
| 55.62 | 0.348 | 9.66 | -0.511 | -- | -- | -- | -- | 0.0693 | -- | -- | -- | -- | -- |
| 55.91 | 0.35 | 9.64 | -- | 0.355 | -- | -- | -- | 0.12 | 6.91 | -- | -- | -- | -- |
| 59.69 | 0.36 | 9.66 | -- | -- | -0.306 | -- | -- | 0.0467 | -- | 24.69 | 2813 | -- | -- |
| 62.51 | 0.369 | 9.64 | -- | -- | -- | -- | -- | 0.126 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.76 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 7 | 32.87 | wind | 1 | 14400 | > th | dose independent | rect. | 11 | 2 |
| 17 | 33.10 | wind | 1 | 14400 | < th | dose independent | rect. | 11 | 2 |
| 24 | 33.27 | wind | 3 | 43200 | < th | dose dependent | rect. | 23 | 3 |
| 32 | 33.39 | wind | 1 | 14400 | < th | dose dependent | rect. | 10 | 3 |
| 34 | 33.41 | wind | 1 | 14400 | > th | dose independent | rect. | 7 | 6 |
| 44 | 33.58 | wind | 1 | 14400 | < th | dose independent | rect. | 6 | 17 |
| 46 | 33.60 | wind | 3 | 14400 | < th | dose dependent | rect. | 5 | 9 |
| 47 | 33.61 | wind | 1 | 14400 | < th | dose independent | rect. | 7 | 6 |
| 55 | 33.71 | wind | 1 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 61 | 33.80 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 20 |
| 68 | 33.84 | wind | 1 | 14400 | < th | dose dependent | rect. | 6 | 17 |
| 77 | 33.90 | wind | 3 | 14400 | < th | dose dependent | rect. | 20 | 20 |
| 84 | 33.95 | temperature | 30 | 4320 | < th | dose dependent | rect. | 1 | 2 |
| 87 | 33.96 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 2 |
| 108 | 34.03 | humidity | 90 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 110 | 34.03 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 7 |
| 115 | 34.06 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 7 |
| 171 | 34.19 | wind | 1 | 43200 | > th | dose independent | rect. | 21 | 5 |
| 198 | 34.22 | wind | 3 | 14400 | < th | dose dependent | sin | 3 | NA |
| 217 | 34.24 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 1 |
| 233 | 34.27 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 258 | 34.30 | wind | 1 | 14400 | > th | dose independent | sin | 0 | NA |
| 289 | 34.33 | wind | 3 | 14400 | < th | dose dependent | rect. | 1 | 15 |
| 356 | 34.40 | wind | 3 | 14400 | < th | dose dependent | rect. | 4 | 22 |
| 394 | 34.45 | wind | 3 | 14400 | < th | dose dependent | rect. | 5 | 4 |
| 423 | 34.47 | temperature | 25 | 1440 | < th | dose dependent | rect. | 15 | 16 |
| 431 | 34.49 | temperature | 25 | 1440 | < th | dose dependent | sin | 10 | NA |
| 465 | 34.51 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 15 |
| 500 | 34.53 | temperature | 25 | 1440 | < th | dose dependent | rect. | 10 | 21 |
| 526 | 34.56 | humidity | 90 | 14400 | < th | dose dependent | rect. | 1 | 6 |
| 535 | 34.56 | wind | 3 | 14400 | < th | dose dependent | rect. | 10 | 22 |
| 538 | 34.57 | wind | 3 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 562 | 34.58 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 18 |
| 600 | 34.61 | wind | 1 | 14400 | < th | dose independent | sin | 23 | NA |
| 615 | 34.62 | wind | 1 | 43200 | < th | dose independent | rect. | 19 | 7 |
| 616 | 34.62 | wind | 3 | 14400 | < th | dose dependent | no | NA | NA |
| 681 | 34.66 | wind | 1 | 43200 | > th | dose independent | rect. | 16 | 10 |
| 704 | 34.67 | temperature | 25 | 1440 | < th | dose dependent | rect. | 15 | 21 |
| 707 | 34.68 | wind | 1 | 43200 | < th | dose independent | rect. | 16 | 10 |
| 785 | 34.72 | wind | 3 | 14400 | < th | dose dependent | rect. | 24 | 23 |
| 826 | 34.77 | wind | 1 | 14400 | < th | dose independent | rect. | 6 | 14 |
| 845 | 34.78 | wind | 1 | 43200 | > th | dose independent | sin | 15 | NA |
| 864 | 34.79 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 891 | 34.81 | wind | 1 | 43200 | < th | dose independent | sin | 16 | NA |