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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0869300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.32 (0.0431) R2 : 0.00455
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.131 (0.0908) R2dN8 : 0.00587 R2N8 : 0.00455
σ : 0.812
deviance : 302.55
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
287.54 0.797 3.34 -0.227 0.168 -0.63 0.328 2.3 0.0997 0.942 1.013 12 -- --
292.34 0.796 3.32 -0.135 0.173 -0.484 0.148 -- 0.12 0.758 1 12 -- --
285.39 0.793 3.34 -0.267 0.177 -0.585 -- 2.54 0.0935 1.88 1.013 12 -- --
292.21 0.796 3.32 -0.145 0.189 -0.462 -- -- 0.119 2.09 1.1 12 -- --
287.11 0.793 3.34 -0.272 -- -0.66 -- 2.6 0.0975 -- 1.013 12 -- --
297.05 0.808 3.32 -0.0972 0.303 -- 0.0287 -- 0.114 2.93 -- -- -- --
297.05 0.807 3.32 -0.0978 0.304 -- -- -- 0.114 2.96 -- -- -- --
292.43 0.8 3.31 -0.147 -- -0.48 -- -- 0.137 -- 1.142 12 -- --
292.79 0.797 3.31 -- 0.19 -0.442 -- -- 0.137 2.13 1.025 12 -- --
302.36 0.813 3.32 -0.0849 -- -- -- -- 0.122 -- -- -- -- --
297.31 0.807 3.32 -- 0.302 -- -- -- 0.125 2.95 -- -- -- --
292.99 0.8 3.31 -- -- -0.469 -- -- 0.153 -- 1.142 12 -- --
302.55 0.812 3.32 -- -- -- -- -- 0.131 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 273.91 radiation 1.0 90 < th dose independent rect. 8 1
4 273.91 radiation 1.0 90 < th dose dependent rect. 8 1
11 280.07 wind 1.0 10 > th dose independent rect. 10 23
12 280.64 wind 1.0 10 > th dose independent rect. 19 13
14 282.00 temperature 20.0 90 > th dose independent rect. 2 1
16 282.25 wind 1.0 10 < th dose independent rect. 2 3
20 282.86 wind 3.0 90 < th dose dependent rect. 8 1
26 283.82 wind 9.0 1440 < th dose independent rect. 3 1
27 283.82 temperature 10.0 1440 > th dose independent rect. 3 1
30 283.82 temperature 30.0 1440 < th dose independent rect. 3 1
34 283.82 humidity 50.0 1440 > th dose independent rect. 3 1
43 283.82 atmosphere 995.0 1440 > th dose independent rect. 3 1
44 283.82 radiation 1.0 1440 < th dose independent rect. 3 1
64 283.82 temperature 10.0 1440 > th dose independent rect. 4 23
67 283.82 radiation 1.0 1440 < th dose dependent rect. 3 1
88 284.59 humidity 90.0 10 > th dose independent rect. 2 1
89 284.62 humidity 90.0 30 > th dose dependent rect. 2 1
93 284.70 wind 1.0 30 < th dose dependent rect. 2 1
94 284.72 wind 1.0 10 < th dose independent rect. 2 1
100 284.95 wind 1.0 270 > th dose independent rect. 3 11
104 285.00 atmosphere 1000.0 30 > th dose independent rect. 2 1
105 285.01 atmosphere 1000.0 10 > th dose independent rect. 3 23
107 285.02 atmosphere 1005.0 90 > th dose dependent rect. 2 1
118 285.13 wind 1.0 10 < th dose independent rect. 22 7
119 285.13 wind 1.0 10 < th dose independent rect. 15 14
121 285.14 wind 5.0 30 < th dose independent rect. 2 1
124 285.14 wind 1.0 10 < th dose independent rect. 17 12
131 285.15 temperature 15.0 30 > th dose dependent rect. 2 1
137 285.18 temperature 10.0 30 > th dose independent rect. 2 1
139 285.18 temperature 30.0 30 < th dose independent rect. 2 1
140 285.18 humidity 50.0 30 > th dose independent rect. 2 1
144 285.18 atmosphere 1010.0 30 < th dose independent rect. 2 1
146 285.18 radiation 1.0 30 < th dose independent rect. 2 1
151 285.18 precipitation 0.1 30 < th dose independent rect. 2 1
152 285.18 temperature 10.0 30 > th dose independent rect. 3 23
153 285.18 radiation 1.0 30 < th dose dependent rect. 2 1
159 285.18 precipitation 0.1 30 < th dose dependent rect. 2 1
162 285.25 precipitation 0.1 10 < th dose independent rect. 3 23
163 285.25 precipitation 0.1 10 < th dose dependent rect. 3 23
164 285.26 wind 1.0 10 < th dose independent rect. 12 17
168 285.27 humidity 90.0 90 < th dose independent rect. 1 2
175 285.35 temperature 30.0 30 < th dose dependent rect. 2 1
182 285.39 atmosphere 1015.0 30 < th dose dependent rect. 2 1
192 285.63 humidity 70.0 10 > th dose dependent rect. 10 1
196 285.67 wind 9.0 30 < th dose independent rect. 3 23
227 285.82 wind 1.0 30 > th dose independent rect. 2 1
228 285.83 humidity 80.0 720 < th dose independent rect. 23 2
233 285.92 humidity 80.0 720 < th dose dependent rect. 23 2
238 286.05 humidity 70.0 10 > th dose independent rect. 10 1
246 286.19 wind 1.0 10 > th dose independent sin 12 NA
248 286.24 radiation 40.0 90 < th dose dependent rect. 9 1
251 286.29 wind 1.0 30 > th dose independent rect. 3 23
254 286.34 radiation 40.0 90 < th dose independent rect. 9 1
264 286.49 atmosphere 1000.0 90 > th dose independent rect. 19 13
266 286.56 wind 1.0 10 < th dose independent rect. 2 7
270 286.66 precipitation 0.1 90 < th dose independent rect. 19 13
271 286.66 precipitation 0.1 90 < th dose dependent rect. 19 13
272 286.70 wind 1.0 10 < th dose independent rect. 7 22
277 286.78 temperature 10.0 90 > th dose independent rect. 8 11
278 286.78 atmosphere 1015.0 90 < th dose independent rect. 8 11
279 286.78 precipitation 0.1 90 < th dose independent rect. 8 11
280 286.78 temperature 10.0 90 > th dose independent rect. 19 13
281 286.78 temperature 30.0 90 < th dose independent rect. 19 13
282 286.78 humidity 50.0 90 > th dose independent rect. 19 13
285 286.78 precipitation 0.1 90 < th dose dependent rect. 8 11
288 286.82 radiation 40.0 90 < th dose independent rect. 19 13
292 286.91 wind 9.0 90 < th dose independent rect. 19 13
296 286.97 humidity 50.0 90 > th dose independent rect. 8 11
297 287.00 radiation 20.0 90 < th dose independent rect. 9 1
298 287.04 radiation 40.0 90 < th dose dependent rect. 19 13
303 287.06 radiation 1.0 90 < th dose dependent rect. 3 23
311 287.13 atmosphere 995.0 90 > th dose independent rect. 8 11
322 287.21 temperature 20.0 720 > th dose independent rect. 22 3
341 287.37 wind 1.0 90 > th dose independent rect. 8 11
347 287.40 precipitation 0.1 720 < th dose independent rect. 9 22
349 287.40 precipitation 0.1 720 < th dose dependent rect. 9 22
350 287.41 wind 1.0 10 > th dose independent rect. 19 19
355 287.48 precipitation 0.1 10 < th dose independent rect. 19 13
356 287.48 precipitation 0.1 10 < th dose dependent rect. 19 13
358 287.53 atmosphere 995.0 90 > th dose dependent rect. 19 13
363 287.59 radiation 40.0 30 < th dose independent rect. 9 10
372 287.72 wind 3.0 30 < th dose dependent rect. 1 4
376 287.75 wind 1.0 10 < th dose independent rect. 2 21
378 287.77 wind 1.0 10 > th dose independent rect. 9 10
380 287.77 radiation 1.0 270 < th dose independent rect. 3 22
384 287.80 humidity 90.0 10 > th dose independent rect. 2 3
386 287.82 wind 1.0 270 > th dose independent rect. 15 23
388 287.86 precipitation 0.1 720 < th dose independent rect. 19 2
390 287.86 precipitation 0.1 720 < th dose dependent rect. 19 2
393 287.87 wind 1.0 10 > th dose independent rect. 17 23
398 287.94 wind 9.0 90 < th dose independent rect. 8 11
401 287.96 wind 1.0 720 > th dose independent rect. 19 2
413 288.01 atmosphere 1010.0 90 < th dose dependent rect. 8 1
415 288.02 wind 1.0 10 < th dose independent sin 12 NA
422 288.04 temperature 10.0 1440 > th dose independent rect. 10 10
425 288.04 temperature 10.0 1440 > th dose independent rect. 20 14
428 288.04 atmosphere 995.0 1440 > th dose independent rect. 20 14
430 288.05 humidity 70.0 720 > th dose independent rect. 7 2
449 288.08 atmosphere 995.0 720 > th dose independent rect. 9 22
450 288.09 wind 1.0 10 > th dose independent no NA NA
455 288.10 atmosphere 995.0 10 > th dose independent rect. 8 11
456 288.10 humidity 90.0 10 < th dose independent rect. 20 13
460 288.13 atmosphere 1000.0 720 > th dose independent rect. 19 2
461 288.13 humidity 90.0 10 > th dose independent rect. 24 5
470 288.13 radiation 1.0 270 < th dose dependent rect. 3 20
491 288.18 wind 1.0 10 > th dose independent rect. 19 21
500 288.22 atmosphere 1010.0 30 < th dose independent rect. 9 1
510 288.22 wind 1.0 10 < th dose independent rect. 2 16
520 288.24 atmosphere 995.0 720 > th dose independent rect. 21 22
521 288.24 wind 1.0 10 > th dose independent rect. 19 23
530 288.26 wind 1.0 10 < th dose independent rect. 2 14
534 288.27 wind 9.0 270 < th dose independent rect. 3 11
541 288.27 humidity 50.0 1440 > th dose independent rect. 20 13
547 288.29 wind 1.0 10 < th dose independent rect. 2 11
578 288.40 temperature 30.0 720 < th dose independent rect. 7 2
579 288.40 humidity 50.0 720 > th dose independent rect. 10 5
588 288.42 temperature 10.0 720 > th dose independent rect. 19 2
589 288.42 temperature 30.0 720 < th dose independent rect. 19 2
590 288.42 humidity 50.0 720 > th dose independent rect. 19 2
592 288.42 radiation 1.0 720 < th dose independent rect. 19 2
599 288.42 temperature 10.0 720 > th dose independent rect. 21 22
601 288.42 radiation 1.0 720 < th dose dependent rect. 19 2
615 288.46 precipitation 0.1 720 < th dose independent rect. 22 21
618 288.46 precipitation 0.1 720 < th dose dependent rect. 22 21
619 288.48 atmosphere 1000.0 720 > th dose independent rect. 3 10
621 288.48 humidity 90.0 30 < th dose independent rect. 10 23
625 288.49 wind 1.0 10 < th dose independent rect. 4 1
628 288.50 wind 9.0 720 < th dose independent rect. 19 2
631 288.50 wind 1.0 10 < th dose independent rect. 12 21
643 288.54 wind 9.0 720 < th dose independent rect. 7 2
644 288.54 temperature 10.0 720 > th dose independent rect. 7 2
647 288.54 atmosphere 995.0 720 > th dose independent rect. 7 2
648 288.54 atmosphere 1015.0 720 < th dose independent rect. 7 2
650 288.54 wind 1.0 10 < th dose independent rect. 15 18
654 288.54 temperature 10.0 720 > th dose independent rect. 9 22
655 288.54 humidity 90.0 90 < th dose dependent rect. 1 2
656 288.56 wind 1.0 10 < th dose independent rect. 17 16
660 288.57 precipitation 0.1 720 < th dose independent rect. 7 2
665 288.57 precipitation 0.1 720 < th dose dependent rect. 7 2
672 288.59 humidity 60.0 14400 > th dose independent rect. 7 1
673 288.59 wind 1.0 10 < th dose independent rect. 21 12
694 288.62 wind 3.0 30 < th dose dependent rect. 18 11
706 288.65 wind 1.0 720 > th dose independent rect. 9 6
738 288.69 wind 9.0 270 < th dose independent rect. 14 13
756 288.73 humidity 50.0 270 > th dose independent rect. 14 13
758 288.74 wind 3.0 90 < th dose independent rect. 8 1
761 288.74 wind 1.0 30 > th dose dependent rect. 19 13
765 288.75 radiation 1.0 270 < th dose independent rect. 16 14
771 288.77 precipitation 0.1 270 < th dose independent rect. 14 13
772 288.77 precipitation 0.1 270 < th dose dependent rect. 14 13
776 288.79 humidity 50.0 720 > th dose independent rect. 22 19
778 288.80 temperature 30.0 30 < th dose independent rect. 9 10
781 288.80 wind 3.0 30 < th dose dependent rect. 7 22
785 288.81 atmosphere 1000.0 720 > th dose independent rect. 19 10
794 288.84 temperature 20.0 10 < th dose dependent rect. 24 4
797 288.85 atmosphere 1010.0 10 < th dose independent rect. 1 10
803 288.88 radiation 1.0 720 > th dose independent rect. 7 2
806 288.89 precipitation 0.1 720 < th dose independent rect. 1 14
807 288.89 precipitation 0.1 720 < th dose independent rect. 10 19
809 288.89 precipitation 0.1 720 < th dose dependent rect. 1 14
810 288.89 precipitation 0.1 720 < th dose dependent rect. 10 19
830 288.98 radiation 40.0 270 < th dose independent rect. 14 13
837 289.00 humidity 90.0 30 < th dose independent rect. 19 10
865 289.03 radiation 1.0 270 > th dose independent rect. 11 23
870 289.05 humidity 50.0 720 > th dose independent rect. 22 21
871 289.06 wind 1.0 10 > th dose independent rect. 9 1
878 289.09 wind 9.0 10 < th dose independent rect. 9 10
901 289.14 wind 1.0 270 < th dose independent rect. 6 20
907 289.15 humidity 50.0 720 > th dose independent rect. 19 19
923 289.19 wind 1.0 270 < th dose independent rect. 6 3
924 289.19 temperature 10.0 270 > th dose independent rect. 3 11
926 289.19 atmosphere 1015.0 270 < th dose independent rect. 3 11
929 289.19 temperature 10.0 270 > th dose independent rect. 14 13
954 289.26 temperature 30.0 10 < th dose independent rect. 9 1
958 289.26 precipitation 0.1 720 < th dose independent rect. 15 19
959 289.26 humidity 60.0 90 > th dose dependent rect. 21 13
960 289.26 precipitation 0.1 720 < th dose dependent rect. 15 19
967 289.28 wind 1.0 720 > th dose independent rect. 13 6
979 289.30 wind 9.0 30 < th dose independent rect. 10 23
980 289.30 wind 3.0 30 < th dose dependent rect. 21 8
992 289.32 precipitation 0.1 270 < th dose independent rect. 3 11
995 289.32 precipitation 0.1 270 < th dose dependent rect. 3 11
996 289.32 radiation 10.0 270 < th dose dependent rect. 16 14