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Os01g0863400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12 (0.0131) R2 : 0.624
β1 : -0.766 (0.0478) R2dD : 0.219 R2D : 0.155
β2 : 0.738 (0.0339) R2dC : 0.394 R2C : 0.357
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.26 (0.0279) R2dN8 : 0.0959 R2N8 : 0.0166
σ : 0.246
deviance : 27.51
__
_____
C
peak time of C : 7.03
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
24.52 0.233 12 -0.736 0.829 -0.256 0.203 0.14 -0.327 6.46 91.02 29 -- --
24.6 0.231 12 -0.729 0.83 -0.251 0.236 -- -0.323 6.44 91 23 -- --
24.62 0.231 12 -0.735 0.828 -0.253 -- 0.163 -0.327 6.45 91 28 -- --
24.74 0.232 12 -0.726 0.829 -0.246 -- -- -0.322 6.43 91.02 22 -- --
43.46 0.307 12 -0.767 -- 0.457 -- 0.34 -0.229 -- 81 535 -- --
27.44 0.246 12 -0.769 0.737 -- 0.169 -- -0.259 7.05 -- -- -- --
27.51 0.246 12 -0.766 0.738 -- -- -- -0.26 7.03 -- -- -- --
41.3 0.299 12 -0.813 -- 0.544 -- -- -0.208 -- 74.7 536 -- --
38.4 0.289 12 -- 0.851 -0.314 -- -- -0.265 6.33 91.12 27 -- --
56.13 0.35 12 -0.751 -- -- -- -- -0.246 -- -- -- -- --
42.97 0.307 12 -- 0.729 -- -- -- -0.174 7.09 -- -- -- --
53.58 0.341 12 -- -- 0.652 -- -- -0.145 -- 72.61 582 -- --
71.02 0.393 12 -- -- -- -- -- -0.163 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 23.11 temperature 10.0 270 > th dose dependent rect. 15 7
2 23.21 humidity 90.0 10 < th dose independent rect. 17 18
4 23.29 temperature 15.0 10 > th dose dependent rect. 17 8
7 23.36 temperature 25.0 10 > th dose independent rect. 17 18
10 23.49 humidity 80.0 10 > th dose dependent rect. 22 20
14 23.53 radiation 1.0 270 > th dose independent rect. 17 13
15 23.53 temperature 25.0 10 > th dose independent rect. 17 16
23 23.59 humidity 90.0 10 < th dose independent rect. 17 15
27 23.60 temperature 15.0 10 > th dose dependent rect. 17 18
31 23.63 temperature 10.0 270 > th dose dependent rect. 15 18
42 23.68 temperature 10.0 270 > th dose dependent rect. 16 16
81 23.84 temperature 20.0 30 > th dose dependent rect. 17 15
89 23.86 atmosphere 1010.0 270 < th dose independent rect. 15 7
90 23.87 atmosphere 1005.0 90 > th dose independent rect. 11 6
94 23.88 humidity 80.0 10 > th dose dependent rect. 22 10
106 23.92 radiation 1.0 270 < th dose independent rect. 20 20
117 23.95 humidity 90.0 10 < th dose independent rect. 3 20
123 23.97 wind 7.0 270 < th dose independent rect. 15 18
131 23.98 radiation 1.0 270 < th dose independent rect. 20 18
138 23.99 humidity 90.0 10 < th dose independent rect. 24 23
142 23.99 radiation 1.0 270 < th dose dependent rect. 20 22
143 24.00 temperature 15.0 270 > th dose independent rect. 15 7
177 24.05 radiation 1.0 270 < th dose dependent rect. 20 20
178 24.06 atmosphere 1015.0 270 < th dose independent rect. 15 19
183 24.06 radiation 1.0 270 < th dose dependent rect. 20 18
192 24.08 radiation 1.0 270 < th dose independent rect. 20 14
195 24.08 atmosphere 1015.0 90 < th dose independent rect. 17 18
196 24.08 humidity 90.0 30 > th dose independent rect. 22 20
207 24.09 radiation 1.0 90 < th dose independent rect. 22 19
219 24.11 radiation 1.0 270 > th dose independent sin 12 NA
220 24.11 humidity 90.0 10 < th dose independent rect. 2 9
227 24.12 humidity 50.0 90 > th dose independent rect. 11 6
228 24.12 wind 1.0 270 > th dose independent rect. 8 8
239 24.13 humidity 90.0 10 < th dose independent rect. 5 17
240 24.13 atmosphere 995.0 270 > th dose dependent rect. 10 5
243 24.14 radiation 1.0 270 < th dose independent sin 11 NA
247 24.14 radiation 1.0 270 < th dose dependent sin 12 NA
253 24.15 wind 7.0 270 < th dose independent rect. 15 6
262 24.16 temperature 15.0 270 > th dose independent rect. 15 19
268 24.16 radiation 1.0 270 < th dose dependent rect. 20 13
278 24.18 humidity 90.0 10 < th dose independent rect. 24 11
280 24.18 temperature 15.0 90 > th dose independent rect. 17 18
282 24.18 humidity 50.0 90 > th dose independent rect. 22 19
298 24.19 precipitation 0.1 270 < th dose independent rect. 15 18
303 24.19 precipitation 0.1 270 < th dose dependent rect. 15 18
306 24.20 humidity 90.0 30 > th dose independent rect. 22 16
320 24.21 wind 1.0 270 > th dose independent rect. 9 6
330 24.21 humidity 80.0 10 > th dose dependent sin 9 NA
335 24.22 radiation 40.0 270 < th dose independent rect. 15 7
345 24.23 precipitation 0.1 270 < th dose independent rect. 15 7
355 24.23 precipitation 0.1 270 < th dose dependent rect. 15 7
365 24.24 humidity 90.0 30 > th dose independent rect. 22 12
372 24.24 humidity 50.0 10 > th dose dependent sin 10 NA
377 24.25 radiation 40.0 270 < th dose independent rect. 13 9
383 24.25 atmosphere 995.0 270 > th dose independent rect. 22 17
389 24.25 atmosphere 995.0 270 > th dose dependent rect. 11 3
390 24.25 wind 9.0 270 < th dose dependent rect. 15 6
397 24.26 atmosphere 1005.0 270 > th dose independent rect. 11 2
400 24.26 wind 9.0 270 < th dose independent rect. 22 17
401 24.26 temperature 10.0 270 > th dose independent rect. 22 17
439 24.28 atmosphere 1015.0 270 < th dose dependent rect. 15 7
453 24.29 temperature 25.0 270 > th dose independent rect. 15 7
478 24.30 wind 9.0 90 < th dose dependent rect. 17 18
480 24.31 humidity 90.0 30 > th dose independent sin 7 NA
502 24.32 wind 1.0 270 > th dose independent rect. 15 7
510 24.32 humidity 50.0 270 > th dose dependent rect. 20 8
520 24.32 humidity 50.0 10 > th dose dependent rect. 22 19
527 24.33 temperature 15.0 270 > th dose dependent rect. 17 2
541 24.34 atmosphere 1010.0 10 < th dose independent rect. 17 8
581 24.36 wind 3.0 270 > th dose independent rect. 11 3
603 24.36 wind 9.0 270 < th dose dependent rect. 15 19
609 24.37 precipitation 0.1 270 < th dose independent rect. 2 9
616 24.37 precipitation 0.1 270 < th dose dependent rect. 2 9
625 24.38 wind 9.0 270 < th dose independent rect. 9 6
628 24.38 wind 3.0 90 > th dose independent rect. 23 18
649 24.39 humidity 90.0 10 < th dose independent sin 7 NA
660 24.39 atmosphere 1000.0 10 > th dose dependent rect. 12 5
670 24.40 radiation 10.0 1440 > th dose independent rect. 11 3
671 24.40 temperature 10.0 270 > th dose independent rect. 9 6
672 24.40 atmosphere 1015.0 270 < th dose independent rect. 9 6
685 24.40 radiation 1.0 90 < th dose dependent rect. 22 19
686 24.40 humidity 90.0 30 > th dose dependent rect. 5 23
691 24.41 atmosphere 995.0 270 > th dose independent rect. 9 6
707 24.42 radiation 1.0 90 < th dose independent rect. 22 10
721 24.42 atmosphere 1015.0 90 < th dose dependent rect. 17 6
727 24.43 humidity 90.0 270 < th dose independent rect. 3 4
731 24.43 precipitation 0.1 270 < th dose independent rect. 9 6
742 24.43 precipitation 0.1 270 < th dose dependent rect. 9 6
751 24.44 radiation 10.0 30 < th dose independent sin 19 NA
830 24.47 atmosphere 1005.0 10 > th dose independent rect. 12 6
848 24.48 radiation 40.0 270 > th dose independent rect. 12 1
861 24.48 humidity 50.0 270 > th dose independent rect. 19 22
864 24.48 humidity 90.0 720 > th dose dependent rect. 23 1
898 24.50 radiation 10.0 10 < th dose independent rect. 17 6
906 24.50 precipitation 0.1 270 < th dose independent rect. 22 17
907 24.50 atmosphere 995.0 90 > th dose independent rect. 17 18
908 24.50 precipitation 0.1 270 < th dose independent rect. 13 22
919 24.50 precipitation 0.1 270 < th dose dependent rect. 22 17
922 24.50 precipitation 0.1 270 < th dose dependent rect. 13 22
935 24.51 radiation 40.0 270 < th dose independent rect. 15 18
947 24.51 humidity 80.0 10 > th dose dependent rect. 7 23
949 24.52 humidity 90.0 270 < th dose independent rect. 2 6
977 24.53 temperature 25.0 270 > th dose independent rect. 16 4
981 24.53 atmosphere 995.0 270 > th dose independent rect. 15 7
983 24.53 radiation 10.0 30 < th dose independent rect. 9 14