Os01g0861900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0861900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 50.97 | 0.335 | 10.1 | -0.428 | 1.04 | -1.47 | 1.72 | -0.856 | -0.194 | 8.26 | 24.7 | 792 | -- | -- |
| 51.97 | 0.336 | 10.2 | -0.512 | 1.07 | -1.34 | 1.53 | -- | -0.209 | 8.22 | 25.1 | 777 | -- | -- |
| 58.98 | 0.358 | 10.1 | -0.485 | 1.03 | -1.41 | -- | -0.12 | -0.214 | 8.45 | 24.8 | 807 | -- | -- |
| 58.9 | 0.357 | 10.2 | -0.529 | 1.03 | -1.41 | -- | -- | -0.231 | 8.43 | 24.8 | 790 | -- | -- |
| 103.4 | 0.474 | 10.2 | -0.428 | -- | -1.29 | -- | -0.327 | -0.208 | -- | 28.7 | 1422 | -- | -- |
| 79.97 | 0.419 | 10.1 | -0.174 | 0.88 | -- | 1.69 | -- | 0.0619 | 7.81 | -- | -- | -- | -- |
| 88.11 | 0.44 | 10.1 | -0.129 | 0.878 | -- | -- | -- | 0.0608 | 7.96 | -- | -- | -- | -- |
| 103.55 | 0.474 | 10.2 | -0.537 | -- | -1.32 | -- | -- | -0.229 | -- | 28.1 | 1418 | -- | -- |
| 65.31 | 0.376 | 10.1 | -- | 1.01 | -1.17 | -- | -- | -0.127 | 8.36 | 24.7 | 771 | -- | -- |
| 130.16 | 0.533 | 10.1 | -0.12 | -- | -- | -- | -- | 0.0722 | -- | -- | -- | -- | -- |
| 88.54 | 0.44 | 10.1 | -- | 0.877 | -- | -- | -- | 0.0751 | 7.97 | -- | -- | -- | -- |
| 110.01 | 0.488 | 10.2 | -- | -- | -1.06 | -- | -- | -0.118 | -- | 28.8 | 1413 | -- | -- |
| 130.54 | 0.533 | 10.1 | -- | -- | -- | -- | -- | 0.0855 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 44.18 | temperature | 30 | 10 | < th | dose dependent | sin | 4 | NA |
| 9 | 46.51 | temperature | 10 | 10 | > th | dose dependent | sin | 5 | NA |
| 10 | 46.52 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 17 |
| 21 | 47.76 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 32 | 48.05 | temperature | 15 | 720 | > th | dose dependent | sin | 9 | NA |
| 58 | 48.79 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 17 |
| 84 | 49.60 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 7 |
| 87 | 49.77 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 17 |
| 120 | 50.23 | temperature | 30 | 720 | < th | dose dependent | sin | 10 | NA |
| 169 | 50.63 | temperature | 30 | 720 | < th | dose dependent | rect. | 20 | 13 |
| 206 | 50.81 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 14 |
| 213 | 50.83 | temperature | 20 | 270 | > th | dose dependent | rect. | 1 | 10 |
| 223 | 50.88 | temperature | 30 | 10 | < th | dose dependent | rect. | 20 | 23 |
| 307 | 51.41 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 337 | 51.54 | temperature | 25 | 720 | < th | dose dependent | rect. | 9 | 23 |
| 353 | 51.66 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 22 |
| 383 | 51.85 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 392 | 51.92 | temperature | 20 | 90 | > th | dose dependent | rect. | 17 | 23 |
| 394 | 51.94 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 406 | 51.98 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 434 | 52.09 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 473 | 52.28 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 487 | 52.35 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 489 | 52.37 | temperature | 10 | 270 | > th | dose dependent | rect. | 15 | 23 |
| 495 | 52.40 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 509 | 52.46 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 544 | 52.66 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 560 | 52.75 | temperature | 20 | 10 | > th | dose dependent | rect. | 19 | 21 |
| 599 | 52.92 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 646 | 53.16 | temperature | 20 | 10 | > th | dose dependent | rect. | 19 | 23 |
| 679 | 53.28 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 681 | 53.30 | temperature | 25 | 1440 | < th | dose independent | rect. | 7 | 15 |
| 690 | 53.35 | temperature | 25 | 1440 | < th | dose independent | sin | 22 | NA |
| 701 | 53.38 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 763 | 53.57 | temperature | 25 | 1440 | < th | dose independent | rect. | 3 | 17 |
| 764 | 53.57 | temperature | 25 | 1440 | < th | dose independent | rect. | 3 | 19 |
| 769 | 53.58 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 11 |
| 810 | 53.68 | temperature | 25 | 1440 | > th | dose independent | sin | 22 | NA |
| 816 | 53.70 | temperature | 25 | 1440 | > th | dose independent | rect. | 8 | 14 |
| 894 | 53.86 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 904 | 53.88 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 947 | 53.96 | temperature | 25 | 1440 | > th | dose independent | rect. | 3 | 17 |
| 967 | 53.98 | temperature | 25 | 1440 | > th | dose independent | rect. | 3 | 19 |