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Os01g0858900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Glycosyl transferase, family 29 protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.9 (0.0226) R2 : 0.612
β1 : 1.25 (0.0828) R2dD : 0.202 R2D : 0.00182
β2 : 0.66 (0.0541) R2dC : 0.127 R2C : 0.0328
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.992 (0.0483) R2dN8 : 0.482 R2N8 : 0.277
σ : 0.425
deviance : 82.44
__
_____
C
peak time of C : 1.21
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
74.04 0.404 11.9 0.991 0.618 -1.02 0.481 -0.649 0.875 1.12 20.4 2590 -- --
74.32 0.402 11.9 0.95 0.621 -0.8 0.503 -- 0.864 1.15 20.87 2596 -- --
74.98 0.403 11.9 0.989 0.624 -1.03 -- -0.749 0.875 1.1 20.4 2634 -- --
75.35 0.404 11.9 0.946 0.626 -0.775 -- -- 0.864 1.13 21 2678 -- --
96.37 0.457 11.9 1.11 -- -0.93 -- -0.519 0.826 -- 26.04 977 -- --
81.72 0.424 11.9 1.27 0.66 -- 0.419 -- 0.995 1.19 -- -- -- --
82.44 0.425 11.9 1.25 0.66 -- -- -- 0.992 1.21 -- -- -- --
96.69 0.458 11.9 1.01 -- -0.891 -- -- 0.804 -- 26.6 979 -- --
77.91 0.411 12 -- 0.641 -1.11 -- -- 0.535 1.09 24.91 46504 -- --
109.35 0.489 11.9 1.28 -- -- -- -- 1.01 -- -- -- -- --
123.69 0.52 11.9 -- 0.681 -- -- -- 0.853 1.28 -- -- -- --
103.1 0.473 12 -- -- -1.14 -- -- 0.549 -- 25 47520 -- --
152.34 0.576 11.9 -- -- -- -- -- 0.864 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 72.67 wind 1 43200 < th dose dependent rect. 3 21
3 72.99 wind 1 43200 > th dose independent rect. 12 21
8 73.15 wind 1 43200 < th dose independent rect. 11 21
12 73.25 wind 1 43200 < th dose independent rect. 18 20
16 73.29 wind 1 1440 < th dose dependent rect. 6 1
25 73.37 wind 1 43200 < th dose independent rect. 20 18
27 73.39 wind 1 43200 > th dose independent rect. 16 19
38 73.44 wind 1 43200 < th dose dependent rect. 5 7
60 73.53 wind 1 43200 > th dose independent rect. 22 14
65 73.53 wind 1 43200 < th dose dependent rect. 9 23
72 73.56 wind 1 43200 < th dose dependent rect. 22 21
76 73.58 wind 1 43200 < th dose dependent rect. 3 12
90 73.64 wind 1 43200 < th dose independent rect. 14 22
99 73.67 wind 7 14400 > th dose dependent rect. 16 1
110 73.72 wind 1 43200 > th dose independent sin 6 NA
118 73.75 wind 1 43200 < th dose dependent rect. 18 23
125 73.76 wind 1 43200 < th dose dependent rect. 15 23
129 73.77 radiation 10 4320 > th dose dependent rect. 17 14
139 73.79 wind 1 43200 < th dose dependent no NA NA
148 73.82 atmosphere 1015 43200 < th dose independent rect. 6 1
150 73.82 wind 1 43200 < th dose independent rect. 3 22
151 73.82 wind 1 43200 < th dose dependent sin 3 NA
164 73.85 radiation 10 4320 > th dose dependent rect. 5 2
177 73.86 atmosphere 1015 43200 > th dose independent rect. 6 1
188 73.88 wind 1 43200 > th dose independent rect. 6 3
199 73.90 wind 1 43200 > th dose independent rect. 6 1
217 73.93 wind 1 43200 < th dose dependent rect. 6 3
222 73.94 wind 1 43200 < th dose independent rect. 20 23
232 73.96 wind 1 43200 < th dose independent rect. 22 23
260 74.02 wind 1 43200 < th dose independent no NA NA
288 74.08 wind 1 43200 > th dose independent rect. 3 9
325 74.15 wind 1 43200 < th dose dependent rect. 18 20
344 74.18 wind 1 43200 > th dose independent rect. 3 21
365 74.22 humidity 60 43200 > th dose dependent rect. 5 2
385 74.25 wind 1 43200 > th dose independent rect. 20 23
386 74.25 wind 1 43200 > th dose independent rect. 22 23
391 74.26 wind 1 43200 < th dose independent rect. 5 23
411 74.30 wind 7 14400 < th dose independent rect. 18 1
416 74.31 wind 1 43200 > th dose independent rect. 3 12
419 74.31 wind 1 43200 > th dose independent rect. 22 21
433 74.33 wind 9 14400 < th dose independent rect. 16 1
440 74.33 atmosphere 1015 43200 < th dose independent rect. 23 10
453 74.34 wind 7 14400 > th dose dependent rect. 18 1
454 74.34 atmosphere 1015 43200 > th dose dependent rect. 7 1
459 74.35 temperature 30 720 < th dose dependent rect. 6 1
480 74.38 wind 1 43200 > th dose independent no NA NA
481 74.38 atmosphere 1015 43200 < th dose independent sin 5 NA
483 74.38 wind 7 14400 > th dose independent rect. 23 2
488 74.38 atmosphere 1015 43200 > th dose independent rect. 23 10
512 74.39 atmosphere 1015 43200 > th dose independent rect. 19 14
513 74.39 atmosphere 1015 43200 < th dose independent rect. 19 14
520 74.39 atmosphere 1015 43200 < th dose independent rect. 4 16
527 74.39 atmosphere 1015 43200 > th dose independent rect. 3 18
534 74.40 wind 1 43200 < th dose independent rect. 6 1
547 74.40 atmosphere 1015 43200 > th dose independent rect. 5 16
570 74.41 atmosphere 1015 43200 > th dose independent sin 5 NA
576 74.41 wind 1 43200 < th dose independent rect. 3 12
597 74.41 atmosphere 1015 43200 > th dose independent rect. 3 21
600 74.41 wind 7 14400 > th dose dependent rect. 23 2
602 74.42 wind 1 43200 < th dose independent sin 5 NA
604 74.42 atmosphere 1015 43200 > th dose independent sin 3 NA
678 74.43 atmosphere 1015 43200 < th dose independent rect. 3 21
685 74.43 atmosphere 1015 43200 < th dose independent rect. 22 22
686 74.43 temperature 20 270 > th dose dependent rect. 7 5
772 74.45 atmosphere 1015 43200 > th dose independent rect. 22 23
780 74.45 atmosphere 1015 43200 > th dose dependent rect. 22 10
841 74.47 atmosphere 1015 43200 > th dose independent no NA NA
843 74.47 atmosphere 1015 43200 < th dose independent no NA NA
844 74.47 wind 7 14400 < th dose independent rect. 23 2
888 74.47 atmosphere 1015 43200 > th dose dependent rect. 2 6
897 74.48 wind 7 14400 > th dose independent rect. 18 1
898 74.48 temperature 20 1440 < th dose independent rect. 5 4
988 74.49 atmosphere 1015 43200 > th dose dependent sin 8 NA
999 74.50 wind 1 1440 < th dose independent rect. 6 1