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Os01g0852500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : ELM2 domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.5 (0.0123) R2 : 0.0425
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.117 (0.026) R2dN8 : 0.0549 R2N8 : 0.0425
σ : 0.232
deviance : 24.75
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
14.11 0.177 11.5 0.198 0.4 0.195 -0.0473 -0.376 0.163 4.35 71 1444 -- --
14.41 0.177 11.5 0.138 0.424 0.182 -0.106 -- 0.141 4 72 1257 -- --
14.12 0.175 11.5 0.199 0.4 0.196 -- -0.378 0.164 4.36 71 1444 -- --
14.3 0.176 11.5 0.134 0.405 0.237 -- -- 0.137 3.25 73 949 -- --
16.94 0.192 11.5 0.143 -- 0.348 -- -0.199 0.153 -- 73 338 -- --
15.56 0.185 11.5 0.102 0.404 -- -0.106 -- 0.119 4.27 -- -- -- --
15.59 0.185 11.5 0.103 0.404 -- -- -- 0.119 4.29 -- -- -- --
17.01 0.192 11.5 0.143 -- 0.35 -- -- 0.144 -- 73.08 338 -- --
14.78 0.179 11.5 -- 0.406 0.239 -- -- 0.126 3.24 74 936 -- --
24.37 0.231 11.5 0.119 -- -- -- -- 0.13 -- -- -- -- --
15.88 0.186 11.5 -- 0.406 -- -- -- 0.108 4.29 -- -- -- --
17.52 0.195 11.5 -- -- 0.337 -- -- 0.129 -- 74 340 -- --
24.75 0.232 11.5 -- -- -- -- -- 0.117 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 13.54 humidity 90 720 > th dose dependent rect. 20 1
2 13.54 humidity 90 720 < th dose dependent rect. 12 4
3 13.55 humidity 80 720 < th dose dependent rect. 14 1
5 13.56 radiation 10 720 < th dose dependent rect. 14 5
6 13.56 humidity 50 720 > th dose dependent rect. 14 14
10 13.58 humidity 50 720 > th dose dependent rect. 11 17
12 13.59 radiation 10 720 < th dose independent rect. 14 5
19 13.63 humidity 50 720 > th dose dependent rect. 16 11
24 13.64 radiation 10 720 < th dose dependent rect. 14 14
29 13.66 radiation 10 720 < th dose independent rect. 14 14
42 13.69 humidity 60 720 > th dose dependent rect. 15 4
48 13.72 radiation 10 720 < th dose independent rect. 16 11
57 13.75 radiation 10 720 < th dose dependent rect. 9 10
61 13.76 humidity 70 720 > th dose independent rect. 15 4
65 13.76 humidity 50 720 > th dose dependent rect. 7 20
74 13.79 humidity 60 720 > th dose dependent sin 17 NA
77 13.79 humidity 90 720 < th dose dependent rect. 12 13
102 13.82 radiation 10 720 < th dose dependent rect. 9 19
119 13.85 humidity 60 720 > th dose dependent rect. 11 8
125 13.86 humidity 70 1440 > th dose independent rect. 11 7
126 13.86 temperature 20 90 > th dose independent rect. 17 11
136 13.87 humidity 70 720 > th dose dependent rect. 18 1
144 13.88 humidity 80 720 < th dose independent rect. 12 5
147 13.88 atmosphere 1000 30 > th dose dependent rect. 17 6
148 13.88 humidity 90 720 < th dose dependent rect. 12 8
240 13.96 humidity 90 270 > th dose dependent sin 17 NA
258 13.97 humidity 70 720 > th dose independent rect. 14 14
266 13.97 humidity 90 270 > th dose dependent rect. 10 17
272 13.98 humidity 90 30 < th dose independent rect. 23 18
284 13.98 radiation 40 4320 < th dose dependent rect. 17 7
303 14.00 humidity 90 720 > th dose independent rect. 20 1
304 14.00 humidity 80 720 < th dose independent rect. 14 1
357 14.02 humidity 50 720 > th dose dependent rect. 7 14
363 14.03 humidity 80 1440 < th dose independent rect. 10 5
365 14.03 humidity 80 1440 < th dose independent rect. 9 7
369 14.03 humidity 60 1440 > th dose dependent rect. 11 4
398 14.04 humidity 70 720 < th dose independent rect. 14 4
407 14.04 atmosphere 1000 270 > th dose dependent rect. 18 1
411 14.04 radiation 40 4320 < th dose dependent rect. 17 3
441 14.05 wind 1 90 > th dose independent rect. 23 18
443 14.05 radiation 10 4320 < th dose dependent rect. 17 1
446 14.05 radiation 10 1440 < th dose dependent rect. 14 2
455 14.05 humidity 90 270 > th dose dependent rect. 20 7
482 14.06 humidity 70 1440 > th dose independent rect. 11 12
510 14.06 humidity 90 270 > th dose dependent rect. 13 14
516 14.06 humidity 50 720 > th dose dependent rect. 24 19
548 14.07 humidity 50 720 > th dose dependent rect. 7 12
552 14.07 radiation 30 30 < th dose dependent rect. 10 13
577 14.08 radiation 10 720 < th dose dependent sin 15 NA
593 14.08 radiation 10 1440 < th dose dependent rect. 9 13
623 14.09 humidity 90 720 < th dose dependent sin 18 NA
643 14.09 radiation 10 1440 < th dose dependent rect. 13 9
666 14.10 atmosphere 1000 90 > th dose independent rect. 17 6
667 14.10 atmosphere 1015 90 < th dose independent rect. 17 6
670 14.10 atmosphere 1005 270 > th dose independent rect. 21 10
698 14.10 humidity 50 720 > th dose dependent rect. 24 21
702 14.11 radiation 20 1440 > th dose independent rect. 11 3
754 14.12 radiation 10 1440 < th dose independent rect. 15 1
761 14.12 temperature 20 90 > th dose independent rect. 17 6
772 14.12 radiation 10 1440 < th dose dependent sin 18 NA
814 14.13 humidity 70 1440 > th dose independent sin 21 NA
818 14.13 temperature 20 10 < th dose independent rect. 23 5
823 14.13 radiation 10 1440 > th dose independent rect. 9 7
826 14.13 humidity 90 270 < th dose independent rect. 11 15
828 14.13 humidity 70 720 < th dose independent rect. 12 21
889 14.14 atmosphere 1005 90 > th dose independent rect. 23 10
958 14.15 radiation 10 720 < th dose independent sin 14 NA
974 14.15 radiation 1 4320 > th dose dependent rect. 17 1