Os01g0851700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cytosolic starch phosphorylase (Fragment).
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Os01g0851700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Cytosolic starch phosphorylase (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 89.71 | 0.445 | 13.8 | -1.36 | 2.21 | -0.99 | -0.699 | 0.528 | -0.742 | 15.2 | 72 | 1408 | -- | -- |
| 90.32 | 0.443 | 13.8 | -1.28 | 2.2 | -0.96 | -0.693 | -- | -0.719 | 15.2 | 73 | 1418 | -- | -- |
| 91.25 | 0.445 | 13.8 | -1.38 | 2.19 | -1 | -- | 0.52 | -0.748 | 15.2 | 72.31 | 1418 | -- | -- |
| 91.85 | 0.446 | 13.8 | -1.29 | 2.19 | -0.98 | -- | -- | -0.725 | 15.2 | 72.54 | 1421 | -- | -- |
| 190.17 | 0.646 | 13.8 | -1.33 | -- | -1.44 | -- | 0.4 | -0.637 | -- | 72.31 | 1418 | -- | -- |
| 125.6 | 0.525 | 13.8 | -1.09 | 2.18 | -- | -0.918 | -- | -0.588 | 15.2 | -- | -- | -- | -- |
| 128.32 | 0.53 | 13.8 | -1.11 | 2.17 | -- | -- | -- | -0.593 | 15.1 | -- | -- | -- | -- |
| 182.34 | 0.632 | 13.8 | -1.31 | -- | -1.45 | -- | -- | -0.681 | -- | 73.37 | 382 | -- | -- |
| 134.84 | 0.541 | 13.8 | -- | 2.22 | -0.812 | -- | -- | -0.561 | 15.2 | 72.49 | 1421 | -- | -- |
| 397 | 0.931 | 13.8 | -1.2 | -- | -- | -- | -- | -0.65 | -- | -- | -- | -- | -- |
| 160.51 | 0.593 | 13.8 | -- | 2.19 | -- | -- | -- | -0.47 | 15.1 | -- | -- | -- | -- |
| 214.2 | 0.682 | 13.8 | -- | -- | -1.48 | -- | -- | -0.532 | -- | 82.07 | 124 | -- | -- |
| 434.84 | 0.973 | 13.8 | -- | -- | -- | -- | -- | -0.517 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 89.67 | humidity | 70 | 720 | > th | dose independent | rect. | 15 | 5 |
| 4 | 89.94 | humidity | 70 | 720 | > th | dose independent | rect. | 15 | 14 |
| 5 | 90.07 | humidity | 70 | 1440 | > th | dose independent | rect. | 15 | 21 |
| 7 | 90.19 | humidity | 60 | 720 | > th | dose dependent | rect. | 17 | 3 |
| 10 | 90.45 | humidity | 70 | 720 | > th | dose dependent | rect. | 8 | 13 |
| 14 | 90.56 | humidity | 70 | 1440 | > th | dose independent | sin | 13 | NA |
| 33 | 90.83 | radiation | 40 | 1440 | < th | dose dependent | rect. | 18 | 3 |
| 42 | 91.13 | humidity | 80 | 720 | > th | dose independent | rect. | 8 | 14 |
| 97 | 91.85 | radiation | 30 | 1440 | < th | dose dependent | rect. | 18 | 6 |
| 126 | 92.44 | humidity | 90 | 1440 | < th | dose dependent | rect. | 8 | 12 |
| 131 | 92.47 | radiation | 10 | 1440 | < th | dose dependent | rect. | 15 | 6 |
| 132 | 92.47 | radiation | 10 | 1440 | < th | dose dependent | rect. | 15 | 9 |
| 179 | 92.80 | humidity | 70 | 1440 | < th | dose independent | rect. | 15 | 16 |
| 183 | 92.83 | humidity | 70 | 1440 | < th | dose independent | rect. | 15 | 5 |
| 196 | 92.86 | humidity | 70 | 1440 | < th | dose independent | rect. | 15 | 21 |
| 206 | 92.92 | humidity | 70 | 1440 | < th | dose independent | sin | 13 | NA |
| 252 | 93.22 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 22 |
| 312 | 93.47 | humidity | 50 | 1440 | > th | dose dependent | sin | 22 | NA |
| 333 | 93.56 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 13 |
| 362 | 93.60 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 8 |
| 400 | 93.65 | humidity | 90 | 1440 | < th | dose dependent | sin | 23 | NA |
| 441 | 93.68 | humidity | 70 | 1440 | > th | dose independent | rect. | 23 | 22 |
| 448 | 93.69 | humidity | 70 | 1440 | > th | dose independent | no | NA | NA |
| 499 | 93.76 | humidity | 80 | 1440 | < th | dose dependent | rect. | 16 | 22 |
| 526 | 93.82 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 15 |
| 528 | 93.83 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 8 |
| 534 | 93.84 | humidity | 90 | 1440 | < th | dose dependent | rect. | 16 | 3 |
| 545 | 93.87 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 549 | 93.89 | humidity | 90 | 1440 | < th | dose dependent | rect. | 15 | 5 |
| 568 | 93.94 | radiation | 40 | 1440 | < th | dose dependent | rect. | 16 | 8 |
| 582 | 93.97 | radiation | 40 | 1440 | < th | dose dependent | rect. | 16 | 5 |
| 586 | 93.98 | humidity | 50 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 648 | 94.11 | radiation | 10 | 1440 | < th | dose dependent | sin | 14 | NA |
| 656 | 94.13 | humidity | 50 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 666 | 94.15 | humidity | 50 | 14400 | > th | dose independent | rect. | 16 | 18 |
| 682 | 94.19 | humidity | 90 | 1440 | < th | dose dependent | rect. | 13 | 7 |
| 690 | 94.21 | humidity | 50 | 14400 | < th | dose independent | rect. | 16 | 19 |
| 693 | 94.22 | temperature | 25 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 711 | 94.26 | wind | 5 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 738 | 94.31 | wind | 5 | 43200 | > th | dose dependent | rect. | 18 | 4 |
| 789 | 94.40 | humidity | 80 | 1440 | < th | dose dependent | no | NA | NA |
| 814 | 94.48 | temperature | 30 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 832 | 94.51 | humidity | 80 | 1440 | < th | dose dependent | rect. | 10 | 23 |
| 933 | 94.71 | humidity | 60 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 959 | 94.78 | radiation | 10 | 1440 | > th | dose independent | rect. | 15 | 16 |
| 962 | 94.79 | humidity | 60 | 1440 | > th | dose dependent | rect. | 10 | 4 |