BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0851700 Os01g0851700|AK103367
(841 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G46970.1 | chr3:17301625-17306111 REVERSE LENGTH=842 1363 0.0
AT3G29320.1 | chr3:11252871-11257587 FORWARD LENGTH=963 1048 0.0
>AT3G46970.1 | chr3:17301625-17306111 REVERSE LENGTH=842
Length = 841
Score = 1363 bits (3528), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 642/841 (76%), Positives = 724/841 (86%), Gaps = 2/841 (0%)
Query: 1 MPESNG-AACGAAEKVKXXXXXXXXXXXXIAGNISFHAQYSPHFSPLAFGPEQAFYSTAE 59
M +NG AA EK+ IAGNI +HA+YSPHFSPL FGPEQA Y+TAE
Sbjct: 1 MANANGKAATSLPEKISAKANPEADDATEIAGNIVYHAKYSPHFSPLKFGPEQALYATAE 60
Query: 60 SVRDHLVQRWNETYLHFHKTDPKQTYYLSMEYLQGRALTNAVGNLGITGAYAEAVKKFGY 119
S+RD L+Q WNETY+HF+K DPKQTYYLSMEYLQGRALTNA+GNL + G YA+A++ GY
Sbjct: 61 SLRDRLIQLWNETYVHFNKVDPKQTYYLSMEYLQGRALTNAIGNLNLQGPYADALRTLGY 120
Query: 120 ELEALVGQEKDXXXXXXXXXXXXSCFLDSMATLNLPAWGYGLRYRYGLFKQCITKEGQEE 179
ELE + QEKD SCFLDSMATLNLPAWGYGLRYR+GLFKQ ITK+GQEE
Sbjct: 121 ELEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRYRHGLFKQIITKKGQEE 180
Query: 180 IAEDWLEKFSPWEIVRHDIVYPIRFFGHVEILPDGSRKWVGGEVLNALAYDVPIPGYKTK 239
I EDWLEKFSPWEIVRHD+V+P+RFFG V++ PDGSRKWV G+V+ ALAYDVPIPGY TK
Sbjct: 181 IPEDWLEKFSPWEIVRHDVVFPVRFFGKVQVNPDGSRKWVDGDVVQALAYDVPIPGYGTK 240
Query: 240 NAISLRLWDAKASAEDFNLFQFNDGQYESAAQLHARAQQICAVLYPGDATEEGKLLRLKQ 299
N ISLRLW+AKA AED +LFQFN+G+YE AAQLH+RAQQIC VLYPGDATE GKLLRLKQ
Sbjct: 241 NTISLRLWEAKARAEDLDLFQFNEGEYELAAQLHSRAQQICTVLYPGDATENGKLLRLKQ 300
Query: 300 QYFLCSASLQDIFFRFKERKADRVSGKWSEFPAKVAVQLNDTHPTLAIPELMRLLMDVEG 359
Q+FLCSASLQDI RF ER S KWSEFP+KVAVQ+NDTHPTLAIPELMRLLMD G
Sbjct: 301 QFFLCSASLQDIISRFHERSTTEGSRKWSEFPSKVAVQMNDTHPTLAIPELMRLLMDDNG 360
Query: 360 LGWDEAWDITNKTIAYTNHTVLPEALEKWSQIVMRKLLPRHMEIIEEIDKRFKEMVISTR 419
LGWDEAWD+T+KT+AYTNHTVLPEALEKWSQ +M KLLPRHMEIIEEIDKRF + + TR
Sbjct: 361 LGWDEAWDVTSKTVAYTNHTVLPEALEKWSQSLMWKLLPRHMEIIEEIDKRFVQTIRDTR 420
Query: 420 KEMEGKIDSMRILDNSNPQKPVVRMANLCVVSAHTVNGVAELHSNILKEELFADYLSIWP 479
++E KI S+ ILDN NPQKPVVRMANLCVVS+HTVNGVA+LHS+ILK ELFADY+SIWP
Sbjct: 421 VDLEDKISSLSILDN-NPQKPVVRMANLCVVSSHTVNGVAQLHSDILKAELFADYVSIWP 479
Query: 480 NKFQNKTNGITPRRWLRFCNPELSEIVTKWLKTDQWTSNLDLLTGLRKFADDEKLHAEWX 539
NKFQNKTNGITPRRWLRFC+PELS+I+TKWLKTD+W ++LDLLTGLR+FAD+E+L +EW
Sbjct: 480 NKFQNKTNGITPRRWLRFCSPELSDIITKWLKTDKWITDLDLLTGLRQFADNEELQSEWA 539
Query: 540 XXXXXXXXXXXXHVLDVTGVTIDPNSLFDIQIKRIHEYKRQLLNILGAVYRYKKLKGMSA 599
++ VTGV+IDP SLFDIQ+KRIHEYKRQL+NILG VYR+KKLK M
Sbjct: 540 SAKTANKKRLAQYIERVTGVSIDPTSLFDIQVKRIHEYKRQLMNILGVVYRFKKLKEMKP 599
Query: 600 EERQKVTPRTVMIGGKAFATYTNAKRIVKLVNDVGAVVNNDPDVNKYLKVVFIPNYNVSV 659
EER+K PRTVMIGGKAFATYTNAKRIVKLVNDVG VVN+DP+VN+YLKVVF+PNYNV+V
Sbjct: 600 EERKKTVPRTVMIGGKAFATYTNAKRIVKLVNDVGDVVNSDPEVNEYLKVVFVPNYNVTV 659
Query: 660 AEVLIPGSELSQHISTAGMEASGTSNMKFSLNGCVIIGTLDGANVEIREEVGQENFFLFG 719
AE+LIPGSELSQHISTAGMEASGTSNMKF+LNGC+IIGTLDGANVEIREEVG+ENFFLFG
Sbjct: 660 AEMLIPGSELSQHISTAGMEASGTSNMKFALNGCLIIGTLDGANVEIREEVGEENFFLFG 719
Query: 720 AKADQVAGLRKDRENGLFKPDPRFEEAKQLIRSGAFGTYDYAPLLDSLEGNSGFGRGDYF 779
A ADQV LRK+RE+GLFKPDPRFEEAKQ ++SG FG+YDY PLLDSLEGN+GFGRGDYF
Sbjct: 720 ATADQVPRLRKEREDGLFKPDPRFEEAKQFVKSGVFGSYDYGPLLDSLEGNTGFGRGDYF 779
Query: 780 LVGYDFPSYIDAQAQVDEAYKDKKKWIKMSILNTAGSGKFSSDRTIAQYAKEIWGITASP 839
LVGYDFPSY+DAQA+VDEAYKD+K W+KMSIL+TAGSGKFSSDRTIAQYAKEIW I A P
Sbjct: 780 LVGYDFPSYMDAQAKVDEAYKDRKGWLKMSILSTAGSGKFSSDRTIAQYAKEIWNIEACP 839
Query: 840 V 840
V
Sbjct: 840 V 840
>AT3G29320.1 | chr3:11252871-11257587 FORWARD LENGTH=963
Length = 962
Score = 1048 bits (2711), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/863 (58%), Positives = 625/863 (72%), Gaps = 58/863 (6%)
Query: 29 IAGNISFHAQYSPHFSPLAFGPEQAFYSTAESVRDHLVQRWNETYLHFHKTDPKQTYYLS 88
+A +I +HA+++P FSP F +AF++TA+SVRD L+ WN TY ++++ + KQ YYLS
Sbjct: 96 VASSIKYHAEFTPLFSPEKFELPKAFFATAQSVRDALIMNWNATYEYYNRVNVKQAYYLS 155
Query: 89 MEYLQGRALTNAVGNLGITGAYAEAVKKFGYELEALVGQEKDXXXXXXXXXXXXSCFLDS 148
ME+LQGRAL+NAVGNLG+ AY +A+K+ G++LE++ QE D SCFLDS
Sbjct: 156 MEFLQGRALSNAVGNLGLNSAYGDALKRLGFDLESVASQEPDPALGNGGLGRLASCFLDS 215
Query: 149 MATLNLPAWGYGLRYRYGLFKQCITKEGQEEIAEDWLEKFSPWEIVRHDIVYPIRFFGHV 208
MATLN PAWGYGLRY+YGLFKQ ITK+GQEE AEDWLE +PWEIVR+D+ YPI+F+G V
Sbjct: 216 MATLNYPAWGYGLRYKYGLFKQRITKDGQEEAAEDWLELSNPWEIVRNDVSYPIKFYGKV 275
Query: 209 EILPDGSRKWVGGEVLNALAYDVPIPGYKTKNAISLRLWDAKASAEDFNLFQFNDGQYES 268
DG ++W+GGE + A+AYDVPIPGYKTK I+LRLW KA +EDF+L +N G++
Sbjct: 276 VFGSDGKKRWIGGEDIVAVAYDVPIPGYKTKTTINLRLWSTKAPSEDFDLSSYNSGKHTE 335
Query: 269 AAQLHARAQQICAVLYPGDATEEGKLLRLKQQYFLCSASLQDIFFRFKERKADRVSGKWS 328
AA+ A++IC VLYPGD + EGK LRLKQQY LCSASLQDI RF+ R V+ W
Sbjct: 336 AAEALFNAEKICFVLYPGDESTEGKALRLKQQYTLCSASLQDIVARFETRSGGNVN--WE 393
Query: 329 EFPAKVAVQLNDTHPTLAIPELMRLLMDVEGLGWDEAWDITNKTIAYTNHTVLPEALEKW 388
EFP KVAVQ+NDTHPTL IPELMR+LMD++GL W++AW IT +T+AYTNHTVLPEALEKW
Sbjct: 394 EFPEKVAVQMNDTHPTLCIPELMRILMDLKGLSWEDAWKITQRTVAYTNHTVLPEALEKW 453
Query: 389 SQIVMRKLLPRHMEIIEEIDKRFKEMVISTRKE-----MEGKIDSMRILDNSN------- 436
S +M KLLPRH+EIIE+ID+ ++S +E K+ +MRIL+N
Sbjct: 454 SLELMEKLLPRHVEIIEKIDEELVRTIVSEYGTADPDLLEEKLKAMRILENVELPSAFAD 513
Query: 437 -----PQKPV--------------------------------------VRMANLCVVSAH 453
KPV VRMANL VV H
Sbjct: 514 VIVKPVNKPVTAKDAQNGVKTEQEEEKTAGEEEEDEVIPEPTVEPPKMVRMANLAVVGGH 573
Query: 454 TVNGVAELHSNILKEELFADYLSIWPNKFQNKTNGITPRRWLRFCNPELSEIVTKWLKTD 513
VNGVAE+HS I+K+++F D++ +WP KFQNKTNG+TPRRW+RFCNP LS+I+T W+ T+
Sbjct: 574 AVNGVAEIHSEIVKQDVFNDFVQLWPEKFQNKTNGVTPRRWIRFCNPYLSDIITNWIGTE 633
Query: 514 QWTSNLDLLTGLRKFADDEKLHAEWXXXXXXXXXXXXXHVLDVTGVTIDPNSLFDIQIKR 573
W N + + LRKFAD+E L +EW + + TG T+ P+++FDIQIKR
Sbjct: 634 DWVLNTEKVAELRKFADNEDLQSEWRAAKKKNKLKVVSLIKERTGYTVSPDAMFDIQIKR 693
Query: 574 IHEYKRQLLNILGAVYRYKKLKGMSAEERQKV-TPRTVMIGGKAFATYTNAKRIVKLVND 632
IHEYKRQLLNILG VYRYKK+K MSA ER+K PR + GGKAFATY AKRIVK + D
Sbjct: 694 IHEYKRQLLNILGIVYRYKKMKEMSASEREKAFVPRVCIFGGKAFATYVQAKRIVKFITD 753
Query: 633 VGAVVNNDPDVNKYLKVVFIPNYNVSVAEVLIPGSELSQHISTAGMEASGTSNMKFSLNG 692
V + +N+DP++ LKV+F+P+YNVSVAE+LIP SELSQHISTAGMEASGTSNMKFS+NG
Sbjct: 754 VASTINHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFSMNG 813
Query: 693 CVIIGTLDGANVEIREEVGQENFFLFGAKADQVAGLRKDRENGLFKPDPRFEEAKQLIRS 752
CV+IGTLDGANVEIREEVG+ENFFLFGAKADQ+ LRK+R G F PDP FEE K+ + S
Sbjct: 814 CVLIGTLDGANVEIREEVGEENFFLFGAKADQIVNLRKERAEGKFVPDPTFEEVKKFVGS 873
Query: 753 GAFGTYDYAPLLDSLEGNSGFGRGDYFLVGYDFPSYIDAQAQVDEAYKDKKKWIKMSILN 812
G FG+ Y L+ SLEGN GFGR DYFLVG DFPSYI+ Q +VDEAY+D+K+W +MSI+N
Sbjct: 874 GVFGSNSYDELIGSLEGNEGFGRADYFLVGKDFPSYIECQEKVDEAYRDQKRWTRMSIMN 933
Query: 813 TAGSGKFSSDRTIAQYAKEIWGI 835
TAGS KFSSDRTI +YAK+IW I
Sbjct: 934 TAGSFKFSSDRTIHEYAKDIWNI 956
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.135 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 17,972,560
Number of extensions: 757069
Number of successful extensions: 1683
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1679
Number of HSP's successfully gapped: 3
Length of query: 841
Length of database: 11,106,569
Length adjustment: 107
Effective length of query: 734
Effective length of database: 8,173,057
Effective search space: 5999023838
Effective search space used: 5999023838
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 116 (49.3 bits)