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Os01g0851600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.1 (0.0233) R2 : 0.243
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.522 (0.056) R2dC : 0.145 R2C : 0.121
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.37 (0.049) R2dN8 : 0.122 R2N8 : 0.0987
σ : 0.44
deviance : 88.29
__
_____
C
peak time of C : 13.3
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
75.86 0.409 10 -0.301 0.544 0.673 -0.147 0.734 -0.323 13.4 50.25 6816 -- --
76.54 0.407 10.1 -0.306 0.546 0.846 -0.173 -- -0.327 13.5 49 6816 -- --
75.94 0.406 10 -0.306 0.544 0.676 -- 0.742 -0.323 13.3 50.19 6816 -- --
76.63 0.408 10.1 -0.309 0.544 0.85 -- -- -0.329 13.4 49.06 6820 -- --
92.74 0.449 10.1 -0.306 -- 0.702 -- 0.582 -0.398 -- 51 7537 -- --
87.94 0.44 10.1 -0.0522 0.522 -- -0.266 -- -0.375 13.5 -- -- -- --
88.19 0.44 10.1 -0.0616 0.521 -- -- -- -0.377 13.3 -- -- -- --
93.11 0.449 10.1 -0.32 -- 0.846 -- -- -0.414 -- 49.91 7540 -- --
78.95 0.414 10 -- 0.564 0.723 -- -- -0.33 13.3 49.11 6817 -- --
104.95 0.479 10.1 -0.0818 -- -- -- -- -0.387 -- -- -- -- --
88.29 0.44 10.1 -- 0.522 -- -- -- -0.37 13.3 -- -- -- --
95.51 0.455 10.1 -- -- 0.718 -- -- -0.379 -- 50 7540 -- --
105.13 0.479 10.1 -- -- -- -- -- -0.378 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 72.09 temperature 10.0 90 > th dose dependent rect. 9 19
2 72.54 temperature 30.0 270 < th dose independent rect. 2 8
6 73.12 temperature 10.0 270 > th dose dependent rect. 7 20
7 73.22 temperature 10.0 270 > th dose dependent rect. 22 16
9 73.39 temperature 10.0 270 > th dose dependent rect. 21 6
14 73.60 temperature 10.0 10 > th dose dependent rect. 9 20
15 73.68 precipitation 0.1 270 < th dose independent rect. 3 18
16 73.68 temperature 10.0 90 > th dose dependent rect. 21 8
17 73.68 precipitation 0.1 270 < th dose dependent rect. 3 18
18 73.72 radiation 1.0 90 < th dose dependent rect. 21 20
21 73.78 temperature 10.0 270 > th dose dependent rect. 7 8
22 73.79 temperature 20.0 270 > th dose dependent rect. 21 17
23 73.80 temperature 30.0 90 < th dose independent rect. 5 16
24 73.82 wind 9.0 270 < th dose independent rect. 9 18
30 73.94 precipitation 0.1 270 < th dose independent rect. 3 6
32 73.94 precipitation 0.1 270 < th dose dependent rect. 3 6
34 74.02 temperature 10.0 10 > th dose dependent rect. 21 8
37 74.03 wind 9.0 270 < th dose independent rect. 10 16
43 74.09 temperature 20.0 90 > th dose independent rect. 21 7
45 74.12 radiation 1.0 90 < th dose independent rect. 21 19
51 74.17 radiation 1.0 10 < th dose independent rect. 21 20
55 74.19 precipitation 0.1 270 < th dose independent rect. 14 8
57 74.19 precipitation 0.1 270 < th dose dependent rect. 14 8
59 74.20 radiation 1.0 10 < th dose dependent sin 7 NA
70 74.33 radiation 30.0 270 < th dose independent rect. 3 6
71 74.33 temperature 15.0 270 > th dose independent rect. 2 8
73 74.34 radiation 1.0 10 < th dose independent sin 7 NA
74 74.34 wind 7.0 270 < th dose independent rect. 3 6
78 74.38 temperature 10.0 270 > th dose independent rect. 3 6
80 74.38 humidity 50.0 270 > th dose independent rect. 3 6
81 74.38 atmosphere 995.0 270 > th dose independent rect. 3 6
82 74.38 atmosphere 1015.0 270 < th dose independent rect. 3 6
84 74.38 temperature 10.0 270 > th dose independent rect. 9 18
87 74.40 radiation 40.0 270 < th dose dependent rect. 3 6
94 74.46 temperature 30.0 270 < th dose dependent rect. 3 6
96 74.47 humidity 50.0 270 > th dose independent rect. 22 16
98 74.48 humidity 50.0 270 > th dose independent rect. 9 18
106 74.54 wind 1.0 14400 < th dose dependent rect. 1 1
123 74.62 wind 1.0 14400 < th dose dependent rect. 5 2
135 74.67 radiation 40.0 270 < th dose independent rect. 2 8
139 74.68 temperature 15.0 270 > th dose independent rect. 3 18
146 74.70 radiation 1.0 90 > th dose independent sin 9 NA
147 74.70 precipitation 0.1 90 < th dose independent rect. 5 16
150 74.70 precipitation 0.1 90 < th dose dependent rect. 5 16
152 74.71 radiation 1.0 10 > th dose independent sin 7 NA
162 74.75 wind 9.0 270 < th dose independent rect. 22 16
177 74.82 temperature 30.0 10 < th dose independent rect. 5 7
178 74.82 atmosphere 1015.0 270 < th dose independent rect. 22 16
190 74.89 wind 1.0 270 > th dose independent rect. 14 8
206 74.94 temperature 10.0 270 > th dose independent rect. 14 8
207 74.94 temperature 10.0 270 > th dose independent rect. 22 16
208 74.94 atmosphere 995.0 270 > th dose independent rect. 22 16
219 75.01 atmosphere 995.0 270 > th dose independent rect. 14 8
222 75.01 humidity 50.0 270 > th dose dependent rect. 10 17
227 75.03 atmosphere 1015.0 270 < th dose independent rect. 21 6
228 75.03 temperature 15.0 90 > th dose independent rect. 5 16
237 75.06 radiation 1.0 90 < th dose dependent rect. 21 14
249 75.10 radiation 1.0 90 < th dose dependent rect. 21 11
256 75.13 humidity 50.0 270 > th dose dependent rect. 21 6
261 75.15 temperature 20.0 10 > th dose independent rect. 21 8
264 75.16 precipitation 0.1 270 < th dose independent rect. 21 6
267 75.16 precipitation 0.1 270 < th dose dependent rect. 21 6
270 75.17 radiation 1.0 10 < th dose independent rect. 21 11
280 75.19 temperature 10.0 270 > th dose independent rect. 21 6
281 75.19 temperature 30.0 270 < th dose independent rect. 21 6
282 75.19 humidity 50.0 270 > th dose independent rect. 21 6
285 75.19 atmosphere 995.0 270 > th dose independent rect. 21 6
286 75.19 radiation 1.0 270 < th dose independent rect. 21 6
294 75.19 radiation 1.0 270 < th dose dependent rect. 21 6
301 75.20 atmosphere 1015.0 270 < th dose independent rect. 9 17
306 75.21 wind 9.0 270 < th dose independent rect. 21 6
326 75.32 wind 1.0 14400 < th dose independent rect. 5 2
335 75.33 atmosphere 1015.0 90 < th dose independent rect. 21 8
336 75.33 atmosphere 995.0 270 > th dose independent rect. 3 18
339 75.34 precipitation 0.1 270 < th dose independent rect. 22 16
344 75.34 precipitation 0.1 270 < th dose dependent rect. 22 16
345 75.35 radiation 1.0 90 < th dose independent rect. 21 14
350 75.36 humidity 50.0 270 > th dose dependent rect. 3 6
370 75.40 wind 1.0 14400 > th dose independent rect. 5 2
388 75.44 wind 9.0 270 < th dose dependent rect. 3 6
433 75.55 temperature 30.0 10 < th dose independent rect. 5 16
434 75.55 atmosphere 1000.0 90 > th dose independent rect. 5 16
443 75.57 radiation 40.0 270 < th dose independent rect. 14 8
444 75.57 radiation 1.0 90 < th dose independent rect. 21 8
454 75.58 wind 9.0 90 < th dose independent rect. 21 8
455 75.58 temperature 10.0 90 > th dose independent rect. 21 8
456 75.58 temperature 30.0 90 < th dose independent rect. 21 8
457 75.58 humidity 50.0 90 > th dose independent rect. 21 8
460 75.58 atmosphere 995.0 90 > th dose independent rect. 21 8
465 75.58 atmosphere 1015.0 90 < th dose independent rect. 5 16
475 75.62 atmosphere 1015.0 270 < th dose independent rect. 3 18
476 75.62 humidity 50.0 10 > th dose dependent rect. 12 17
485 75.64 wind 1.0 14400 < th dose dependent rect. 1 6
514 75.74 humidity 50.0 14400 > th dose independent rect. 13 23
528 75.78 humidity 60.0 14400 < th dose dependent rect. 11 1
534 75.80 wind 9.0 270 < th dose independent rect. 14 8
563 75.86 humidity 50.0 14400 > th dose independent rect. 14 2
566 75.86 humidity 50.0 14400 > th dose independent rect. 8 9
569 75.86 humidity 50.0 14400 > th dose independent rect. 24 17
584 75.87 wind 9.0 270 < th dose independent rect. 3 18
588 75.88 precipitation 0.1 90 < th dose independent rect. 21 8
589 75.88 precipitation 0.1 270 < th dose independent rect. 9 18
590 75.88 humidity 50.0 14400 > th dose independent rect. 8 20
592 75.88 precipitation 0.1 90 < th dose dependent rect. 21 8
594 75.88 precipitation 0.1 270 < th dose dependent rect. 9 18
597 75.89 humidity 50.0 14400 > th dose independent rect. 13 4
600 75.89 humidity 50.0 14400 > th dose independent rect. 8 15
626 75.90 humidity 50.0 14400 > th dose independent no NA NA
685 75.90 humidity 50.0 10 > th dose dependent rect. 21 8
686 75.91 humidity 50.0 14400 > th dose independent sin 21 NA
727 75.92 wind 9.0 90 < th dose independent rect. 5 16
737 75.93 atmosphere 1015.0 10 < th dose independent rect. 21 8
755 75.94 wind 9.0 270 < th dose dependent rect. 21 6
777 75.97 temperature 30.0 270 < th dose dependent rect. 3 15
810 76.01 wind 9.0 270 < th dose independent rect. 7 21
826 76.03 wind 1.0 14400 < th dose dependent rect. 4 5
829 76.03 wind 9.0 10 < th dose dependent rect. 21 8
834 76.04 humidity 50.0 14400 > th dose independent rect. 16 23
839 76.05 precipitation 0.1 270 < th dose independent rect. 16 15
841 76.05 precipitation 0.1 270 < th dose dependent rect. 16 15
875 76.09 atmosphere 995.0 10 > th dose independent rect. 5 16
881 76.09 humidity 60.0 14400 < th dose dependent sin 8 NA
898 76.10 humidity 60.0 14400 < th dose dependent rect. 8 5
916 76.11 precipitation 0.1 270 < th dose independent rect. 10 16
918 76.11 precipitation 0.1 270 < th dose dependent rect. 10 16
953 76.14 wind 9.0 10 < th dose independent rect. 21 8
988 76.16 temperature 10.0 10 > th dose independent rect. 21 8
989 76.16 temperature 30.0 10 < th dose independent rect. 21 8
990 76.16 humidity 50.0 10 > th dose independent rect. 21 8
993 76.16 atmosphere 995.0 10 > th dose independent rect. 21 8
999 76.16 temperature 10.0 10 > th dose independent rect. 5 16