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Os01g0840200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : HSP20-like chaperone domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.6 (0.0232) R2 : 0.515
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.29 (0.0588) R2dC : 0.515 R2C : 0.512
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0689 (0.0489) R2dN8 : 0.00272 R2N8 : 0.000144
σ : 0.438
deviance : 87.8
__
_____
C
peak time of C : 3.62
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
58.96 0.361 13.6 0.601 1.18 0.892 0.796 -1.28 0.00492 4.44 88.02 1066 -- --
60.79 0.363 13.6 0.739 1.16 0.791 0.568 -- -0.000526 4.18 137.2 1169 -- --
60.25 0.362 13.6 0.597 1.17 0.786 -- -0.865 0.0142 3.96 84.49 1204 -- --
60.8 0.363 13.6 0.694 1.2 0.695 -- -- 0.00267 3.72 87.99 1329 -- --
122.42 0.518 13.6 0.83 -- -1.2 -- 0.509 0.0466 -- 92 1176 -- --
71.62 0.397 13.6 0.78 1.28 -- 0.357 -- 0.0194 3.68 -- -- -- --
71.98 0.397 13.6 0.775 1.28 -- -- -- 0.0174 3.63 -- -- -- --
122.92 0.519 13.6 0.823 -- -1.19 -- -- 0.046 -- 92 1187 -- --
72.31 0.396 13.6 -- 1.2 0.797 -- -- -0.0155 3.76 79.11 1324 -- --
162.88 0.596 13.6 0.828 -- -- -- -- 0.0514 -- -- -- -- --
87.8 0.438 13.6 -- 1.29 -- -- -- -0.0689 3.62 -- -- -- --
140.78 0.554 13.6 -- -- -1.19 -- -- -0.0453 -- 92 1187 -- --
180.97 0.628 13.6 -- -- -- -- -- -0.0404 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 53.94 humidity 90.0 720 < th dose independent rect. 17 6
10 55.77 humidity 90.0 720 > th dose dependent rect. 18 5
13 56.03 humidity 90.0 720 < th dose dependent rect. 17 5
30 56.50 humidity 70.0 720 > th dose independent rect. 16 17
33 56.55 humidity 90.0 720 < th dose dependent rect. 19 2
40 56.82 humidity 60.0 720 > th dose dependent rect. 16 4
53 57.04 humidity 90.0 720 < th dose independent rect. 12 11
62 57.14 humidity 50.0 720 > th dose dependent rect. 16 17
99 57.55 humidity 50.0 720 > th dose dependent rect. 16 10
100 57.58 humidity 90.0 720 > th dose independent rect. 17 6
142 57.93 humidity 80.0 720 > th dose independent rect. 18 1
145 57.97 humidity 50.0 720 > th dose dependent rect. 16 12
156 58.06 humidity 70.0 720 > th dose independent sin 12 NA
172 58.21 humidity 90.0 720 < th dose dependent sin 15 NA
182 58.28 humidity 90.0 720 < th dose independent sin 17 NA
213 58.45 humidity 80.0 720 > th dose independent rect. 17 3
219 58.48 humidity 90.0 720 < th dose dependent rect. 15 16
247 58.62 humidity 50.0 720 > th dose dependent sin 13 NA
255 58.66 humidity 90.0 720 > th dose independent rect. 20 1
294 58.89 temperature 30.0 720 < th dose independent rect. 16 3
337 59.08 precipitation 0.1 720 < th dose independent sin 13 NA
339 59.08 precipitation 0.1 720 < th dose dependent sin 13 NA
345 59.11 precipitation 0.1 720 < th dose independent rect. 17 15
346 59.11 precipitation 0.1 720 < th dose dependent rect. 17 15
369 59.25 radiation 1.0 720 < th dose dependent rect. 7 12
387 59.34 precipitation 0.1 720 < th dose independent sin 17 NA
390 59.34 precipitation 0.1 720 < th dose dependent sin 17 NA
397 59.37 precipitation 0.1 720 < th dose independent rect. 11 18
398 59.37 radiation 30.0 720 < th dose dependent rect. 16 1
401 59.37 precipitation 0.1 720 < th dose dependent rect. 11 18
402 59.38 temperature 25.0 720 > th dose dependent rect. 20 6
407 59.40 temperature 25.0 720 > th dose dependent rect. 19 12
417 59.43 wind 5.0 43200 < th dose independent rect. 17 15
421 59.44 wind 7.0 43200 < th dose independent rect. 19 1
427 59.45 precipitation 0.1 720 < th dose independent rect. 13 16
428 59.45 precipitation 0.1 720 < th dose dependent rect. 13 16
439 59.50 precipitation 0.1 720 < th dose independent rect. 15 8
441 59.50 precipitation 0.1 720 < th dose dependent rect. 15 8
461 59.55 humidity 70.0 720 > th dose independent rect. 16 12
464 59.57 wind 5.0 43200 > th dose independent rect. 17 15
470 59.58 humidity 90.0 720 > th dose independent rect. 13 10
474 59.60 humidity 70.0 720 < th dose independent rect. 15 5
493 59.61 wind 7.0 43200 > th dose independent rect. 19 1
495 59.61 wind 3.0 43200 > th dose dependent rect. 17 15
509 59.65 wind 3.0 43200 > th dose dependent rect. 18 13
513 59.66 radiation 1.0 720 < th dose dependent rect. 17 2
529 59.71 radiation 1.0 720 < th dose dependent rect. 14 5
548 59.75 wind 5.0 43200 < th dose independent rect. 16 18
575 59.85 wind 5.0 43200 < th dose independent sin 12 NA
586 59.88 precipitation 0.1 720 < th dose independent rect. 11 16
590 59.88 precipitation 0.1 720 < th dose dependent rect. 11 16
597 59.91 precipitation 0.1 270 < th dose independent sin 10 NA
598 59.91 wind 5.0 43200 > th dose independent rect. 16 17
599 59.91 wind 3.0 43200 > th dose dependent sin 11 NA
600 59.91 precipitation 0.1 270 < th dose dependent sin 10 NA
615 59.95 wind 7.0 43200 > th dose dependent rect. 19 1
636 60.02 wind 5.0 43200 > th dose independent sin 12 NA
637 60.02 wind 5.0 43200 > th dose independent rect. 15 20
642 60.04 humidity 80.0 720 > th dose dependent sin 18 NA
648 60.05 temperature 25.0 720 > th dose dependent rect. 20 1
649 60.05 humidity 50.0 1440 > th dose dependent rect. 11 12
667 60.08 wind 1.0 43200 > th dose dependent rect. 20 9
671 60.09 temperature 30.0 720 < th dose independent rect. 16 9
701 60.14 humidity 50.0 1440 > th dose dependent rect. 13 1
711 60.16 wind 9.0 43200 < th dose dependent rect. 20 9
717 60.17 wind 5.0 43200 > th dose independent rect. 17 23
729 60.21 precipitation 0.1 720 < th dose independent rect. 17 23
737 60.21 precipitation 0.1 720 < th dose dependent rect. 17 23
750 60.24 humidity 70.0 720 < th dose independent sin 13 NA
754 60.25 radiation 1.0 720 < th dose independent rect. 17 2
757 60.25 humidity 50.0 1440 > th dose dependent sin 20 NA
772 60.27 humidity 70.0 1440 > th dose independent rect. 18 21
775 60.27 radiation 30.0 720 < th dose dependent rect. 16 9
823 60.34 humidity 90.0 1440 < th dose dependent rect. 5 17
855 60.38 precipitation 0.1 720 < th dose independent rect. 15 16
860 60.38 humidity 90.0 1440 < th dose dependent sin 21 NA
872 60.38 precipitation 0.1 720 < th dose dependent rect. 15 16
899 60.41 wind 1.0 4320 < th dose independent rect. 3 3
923 60.43 precipitation 0.1 720 < th dose independent rect. 17 8
927 60.43 precipitation 0.1 720 < th dose dependent rect. 17 8
936 60.44 wind 5.0 43200 < th dose independent rect. 21 22
958 60.46 precipitation 0.1 720 < th dose independent rect. 15 23
969 60.46 precipitation 0.1 720 < th dose dependent rect. 15 23
981 60.48 radiation 10.0 720 < th dose dependent rect. 16 10
990 60.49 wind 5.0 43200 < th dose independent no NA NA